in

Current understanding of viral contributions to soil carbon cycling


Growing evidence indicates that soil viruses influence carbon cycling by modulating microbial metabolism and infection dynamics through auxiliary metabolic genes. Beyond host cell lysis, viral processes might regulate carbon flow and the formation of stabilized carbon pools. Integrating viral ecology into soil carbon models and restoration strategies is essential.

Access through your institution

Buy or subscribe

This is a preview of subscription content, access via your institution

Access options

Access through your institution

Buy this article

USD 39.95

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: Viruses as drivers of soil organic carbon persistence.

References

  1. Lu, J. N. et al. DNA viral community enhances microbial carbon fixation capacity via auxiliary metabolic genes in contaminated soils. Nat. Commun. 16, 9984 (2025).

    Article 
    CAS 

    Google Scholar 

  2. Zhu, D. et al. Adaptive expression of phage auxiliary metabolic genes in paddy soils and their contribution toward global carbon sequestration. Proc. Natl Acad. Sci. USA 121, e2419798121 (2024).

    Article 
    CAS 

    Google Scholar 

  3. Xu, Q. et al. Carbon starvation raises capacities in bacterial antibiotic resistance and viral auxiliary carbon metabolism in soils. Proc. Natl Acad. Sci. USA 121, e2318160121 (2024).

    Article 
    CAS 

    Google Scholar 

  4. Wang, L. et al. Soil viral-host interactions regulate microplastic-dependent carbon storage. Proc. Natl Acad. Sci. USA 122, e2516722122 (2025).

    Google Scholar 

  5. Graham, E. B. et al. A global atlas of soil viruses reveals unexplored biodiversity and potential biogeochemical impacts. Nat. Microbiol. 9, 1873–1883 (2024).

    Article 
    CAS 

    Google Scholar 

  6. Wu, R. et al. DNA viral diversity, abundance, and functional potential vary across grassland soils with a range of historical moisture regimes. mBio 12, e02595–21 (2021).

    Article 
    CAS 

    Google Scholar 

  7. Zimmerman, A. E., Graham, E. B., McDermott, J. & Hofmockel, K. S. Estimating the importance of viral contributions to soil carbon dynamics. Glob. Chang. Biol. 30, e17524 (2024).

    Article 
    CAS 

    Google Scholar 

  8. Tao, F. et al. Microbial carbon use efficiency promotes global soil carbon storage. Nature 618, 981–985 (2023).

    Article 
    CAS 

    Google Scholar 

Download references

Acknowledgements

The authors acknowledge support from the European Union’s Horizon Europe research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101206348, and from the CERCA Program of the Generalitat de Catalunya.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to
José L. Balcázar.

Ethics declarations

Competing interests

The authors declare no competing interests.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Mei, Z., Balcázar, J.L. Current understanding of viral contributions to soil carbon cycling.
Nat Rev Earth Environ (2026). https://doi.org/10.1038/s43017-026-00774-2

Download citation

  • Published:

  • Version of record:

  • DOI: https://doi.org/10.1038/s43017-026-00774-2


Source: Ecology - nature.com

Microbial dormancy under freeze–thaw cycling regulates alpine soil responses to warming

Seasonal assessment of water quality and major ion chemistry in the lower region of Lake Kariba, Zambia