in

Trace metal pollution and ecological effects on five crops around a typical manganese mining area in Chongqing, China


Abstract

Manganese mining and smelting release trace metals into surrounding agricultural systems, posing potential ecological and human health risks through crop contamination. We assessed the accumulation, tissue distribution, and risks of nine trace metals (Mn, Cd, Cu, Zn, Ni, Pb, As, Cr, and Sb) in five staple crops (rice, maize, peanut, soybean, and sweet potato) from a manganese mining area in Chongqing, China, using bioconcentration factors, pollution indices, and USEPA-based health risk models. Mn was the most abundant metal in all crops, with rice showing higher accumulation than other species (2.27–3.37-fold, p < 0.05). Rice also exhibited the highest Cr and As concentrations, while Cd and Zn were preferentially enriched in peanuts and soybeans (BCF > 1). Most metals were retained in roots and leaves, with limited accumulation in edible parts (BCF: 0.01–0.05). Pollution assessment identified rice as the most contaminated crop, with Cr and As in rice exceeding food safety thresholds (PN > 25). Health risk assessments indicated that rice consumption poses a potential risk of chronic arsenic exposure in adults and exhibits chronic toxic effects in children, whereas all other crops remained below the risk level (THQ < 1) for both adults and children. Rice is the dominant exposure pathway for trace metal health risks in mining-affected regions, whereas sweet potato, peanut, soybean, and maize are comparatively safer. These findings support crop substitution strategies and targeted soil remediation to enhance food safety in mining-impacted agricultural systems.

Data availability

All data generated or analyzed during this study are included in this manuscript.

References

  1. Adnan, M. et al. Heavy metals pollution from smelting activities: a threat to soil and groundwater. Ecotoxicol. Environ. Saf. 274, 116189 (2024).

    Google Scholar 

  2. Yan, H., Guang, L., Feng, F. & Fang, J. In-situ remediation of cadmium contamination in paddy fields: from rhizosphere soil to rice kernel. Environ. Geochem. Health. 46, 1–28 (2024).

    Google Scholar 

  3. Musa, M., Wang, J., Gao, Y., Wu, D. & Qiu, B. Impact of long-term cadmium exposure on insecticidal cross-resistance and biological traits of brown planthopper Nilaparvata lugens (Hemiptera: Delphacidae). J. Hazard. Mater. 492, 138203 (2025).

    Google Scholar 

  4. Malematja, E., Manyelo, T. G., Sebola, N. A., Kolobe, S. D. & Mabelebele, M. The accumulation of heavy metals in feeder insects and their impact on animal production. Sci. Total Environ. 885, 163716 (2023).

    Google Scholar 

  5. Wang, P., Chen, H., Kopittke, P. M. & Zhao, F. J. Cadmium contamination in agricultural soils of China and the impact on food safety. Environ. Pollut. 249, 1038–1048 (2019).

    Google Scholar 

  6. Du, Y., Hu, X. & Wu, X. Affects of mining activities on cd pollution to the paddy soils and rice grain in Hunan province, central South China. Environ. Monit. Assess. 1, 9843–9856 (2013).

    Google Scholar 

  7. Sheoran, V., Sheoran, A. S. & Poonia, P. Factors affecting phytoextraction: a review. Pedosphere 26, 148–166 (2016).

    Google Scholar 

  8. Li, Z. & Jalal, G. Plant physiology and biochemistry hormonal regulation of anthocyanin biosynthesis for improved stress tolerance in plants. Plant Physiol. Biochem. 201, 107835 (2023).

    Google Scholar 

  9. Zhu, B. et al. Mechanisms of heavy metal-induced rhizosphere changes and crop metabolic evolution: the role of carbon materials. Environ. Res. 263, 120196 (2024).

    Google Scholar 

  10. Sandalio, L. M., Espinosa, J., Shabala, S., León, J. & Romero-puertas, M. C. Reactive oxygen species- and nitric oxide-dependent regulation of ion and metal homeostasis in plants. J. Exp. Bot. 74, 5970–5988 (2023).

    Google Scholar 

  11. Srivastava, R. K. & Pandey, P. Cadmium and lead interactive effects on oxidative stress and antioxidative responses in rice seedlings. Protoplasma 251, 1047–1065 (2014).

    Google Scholar 

  12. Bilal, S. et al. Novel insights into exogenous phytohormones: central regulators in the modulation of physiological, biochemical, and molecular responses in rice under metal (loid) stress. Metabolites 13, 1036 (2023).

    Google Scholar 

  13. Yang, Q. et al. Investigation of manganese tolerance and accumulation of two Mn hyperaccumulators phytolacca Americana L. and polygonum hydropiper L. in the real Mn-contaminated soils near a manganese mine. Environ. Earth Sci. 68, 1127–1134 (2013).

    Google Scholar 

  14. Lv, Y., Kabanda, G., Chen, Y., Wu, C. & Li, W. Spatial distribution and ecological risk assessment of heavy metals in manganese (Mn) contaminated site. Front. Environ. Sci. 10, 1–9 (2022).

    Google Scholar 

  15. Paper, R. Role of jasmonate signaling in the regulation of plant responses to nutrient deficiency. J. Exp. Bot. 74, 1221–1243 (2023).

    Google Scholar 

  16. Toishimanov, M. et al. Phytoremediation properties of sweet potato for soils contaminated by heavy metals in South Kazakhstan. Applied Sci. (Switzerland). 13, 9589 (2023).

  17. Yang, B. et al. Survey of aflatoxin B1 and heavy metal contamination in peanut and peanut soil in China during 2017–2018. Food Control. 118, 1–8 (2020).

    Google Scholar 

  18. Bai, S., Han, X. & Feng, D. Shoot-root signal circuit: phytoremediation of heavy metal contaminated soil. Front. Plant Sci. 14, 1–11 (2023).

    Google Scholar 

  19. Lai, L. et al. Recent progress on fluorescent probes in heavy metal determinations for food safety: a review. Molecules 28, 5689 (2023).

  20. Krailertrattanachai, N. & Ketrot, D. The distribution of trace metals in roadside agricultural soils, Thailand. Int. J. Environ. Res. Public Health. 16, 714 (2019).

    Google Scholar 

  21. Wang, Z., Qin, H. & Wang, J. Accumulation of uranium and heavy metals in the soil–plant system in Xiazhuang uranium ore field, Guangdong Province, China. Environ. Geochem. Health. 41, 2413–2423 (2019).

    Google Scholar 

  22. Zhang, J. & Xu, X. Spatial distribution characteristics and potential risk assessment of heavy metals in sludge of Shanghai sewage treatment plant: a case study. Sustainability (Switzerland) 15, 3465 (2023).

  23. Li, Z., Yu, D., Liu, X. & Wang, Y. The fate of heavy metals and risk assessment of heavy metal in pyrolysis coupling with acid washing treatment for sewage sludge. Toxics 11, (2023).

  24. Bawa, U. Heavy metals concentration in food crops irrigated with pesticides and their associated human health risks in Paki, Kaduna State, Nigeria. Cogent Food Agriculture. 9, 2191889 (2023).

  25. Li, P. et al. Research progress of biosensors in the detection of pesticide residues and heavy metals in tea leaves. Biosensors 15, 778 (2025).

    Google Scholar 

  26. Wang, K., Song, N., Zhao, Q. & van der Zee, S. E. A. T. M. Cadmium re-distribution from pod and root zones and accumulation by peanut (Arachis hypogaea L). Environ. Sci. Pollut. Res. 23, 1441–1448 (2016).

    Google Scholar 

  27. Yang, Q. et al. Transferability of heavy metal(loid)s from karstic soils with high geochemical background to peanut seeds. Environ. Pollut. 299, 118819 (2022).

    Google Scholar 

  28. Huang, Y., Yi, J., Li, X. & Li, F. Transcriptomics and physiological analyses reveal that sulfur alleviates mercury toxicity in rice (Oryza sativa L). J. Environ. Sci. 135, 10–25 (2024).

    Google Scholar 

  29. Kanwal, F., Riaz, A., Ali, S. & Zhang, G. NRAMPs and manganese: magic keys to reduce cadmium toxicity and accumulation in plants. Sci. Total Environ. 921, 171005 (2024).

    Google Scholar 

  30. Zheng, X. et al. Biogeochemical cycle and isotope fractionation of copper in plant–soil systems: a review. Rev. Environ. Sci. Biotechnol. 23, 21–41 (2024).

    Google Scholar 

  31. Liu, X. et al. Sporadic Pb accumulation by plants: influence of soil biogeochemistry, microbial community and physiological mechanisms. J. Hazard. Mater. 444, 130391 (2023).

    Google Scholar 

  32. Tang, H. et al. A review on sources of soil antimony pollution and recent progress on remediation of antimony polluted soils. Ecotoxicol. Environ. Saf. 266, 115583 (2023).

    Google Scholar 

  33. del Gómez-Regalado, M. C. et al. Bioaccumulation/bioconcentration of pharmaceutical active compounds in aquatic organisms: assessment and factors database. Sci. Total Environ. 861, 160638 (2023).

  34. Liu, Y. et al. Comparative transcriptome analysis reveals complex physiological response and gene regulation in peanut roots and leaves under manganese toxicity stress. Int. J. Mol. Sci. 24, 1161 (2023).

  35. Narayanan, M. & Ma, Y. Metal tolerance mechanisms in plants and microbe-mediated bioremediation. Environ. Res. 222, 115413 (2023).

    Google Scholar 

  36. Yaashikaa, P. R., Kumar, P. S., Jeevanantham, S. & Saravanan, R. A review on bioremediation approach for heavy metal detoxification and accumulation in plants. Environ. Pollut. 301, 119035 (2022).

    Google Scholar 

  37. Mao, Y. et al. Research progress of soil microorganisms in response to heavy metals in rice. J. Agric. Food Chem. 70, 8513–8522 (2022).

    Google Scholar 

  38. Li, M., Liu, M., Liu, X., Peng, T. & Wang, S. Decomposition of long time-series fraction of absorbed photosynthetically active radiation signal for distinguishing heavy metal stress in rice. Comput. Electron. Agric. 198, 107111 (2022).

    Google Scholar 

  39. Duan, Y. et al. Toxic metals in a paddy field system: a review. Toxics 10, (2022).

  40. Zhang, S., Hu, C. & Cheng, J. A. Comprehensive evaluation system for the stabilization effect of heavy metal-contaminated soil based on analytic hierarchy process. Int. J. Environ. Res. Public. Health 19, 15296 (2022).

  41. Lai, J., Liu, Z., wei, Li, C. & Luo, X. gang. Analysis of accumulation and phytotoxicity mechanism of uranium and cadmium in two sweet potato cultivars. J. Hazardous Mater. 409, 124997 (2021).

  42. Liu, Z. et al. Heavy metal pollution in a soil-rice system in the Yangtze river region of China. Int. J. Environ. Res. Public. Health 13, 1-16 (2015).

  43. Blanco, A., Högy, P., Zikeli, S., Pignata, M. L. & Rodriguez, J. H. Assessment of elevated CO2 concentrations and heat stress episodes in soybean cultivars growing in heavy metal polluted soils: crop nutritional quality and food safety. Environmental Pollution 303, 119123 (2022).

  44. Zakaria, Z. et al. Understanding potential heavy metal contamination, absorption, translocation and accumulation in rice and human health risks. Plants 10, 1070 (2021).

  45. Cao, M. et al. Assessing Pb-Cr pollution thresholds for ecological risk and potential health risk in selected several kinds of rice. Toxics 10, 1–11 (2022).

    Google Scholar 

  46. Zhang, W., Xin, C. & Yu, S. A. Review of heavy metal migration and its influencing factors in karst Groundwater, Northern and Southern China. Water (Switzerland) 15, 3690 (2023).

  47. Kirichkov, M. V. et al. Application of X-ray based modern instrumental techniques to determine the heavy metals in soils, minerals and organic media. Chemosphere 349, 140782 (2024).

    Google Scholar 

  48. Zhang, Q. et al. Effect of the direct use of biomass in agricultural soil on heavy metals__activation or immobilization? Environ. Pollut. 272, 115989 (2021).

    Google Scholar 

  49. Yang, T. et al. Effect of pyrolysis temperature on the bioavailability of heavy metals in rice straw-derived biochar. Environ. Sci. Pollut. Res. 28, 2198–2208 (2021).

    Google Scholar 

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Funding

declaration.

This work was supported by the Science and Technology Research Program of Chongqing Municipal Education Commission (Grant No. KJQN202304505, KJQN202404515).

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Authors and Affiliations

Authors

Contributions

Yongjiang Zhang: visualization, methodology, investigation, writing original draft. Xixi Li: supervision, conceptualization, methodology, validation, formal analysis, visualization, writing review and editing. Fanjing Kong: investigation, writing original draft. Yuwen Chen: investigation, methodology. Qian Chen: project administration, funding acquisition, Yong He: project administration supervision, conceptualization, methodology, validation, formal analysis, visualization, writing -review and editing.

Corresponding author

Correspondence to
Yong He.

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The authors declare no competing interests.

Statement

The study complied with all relevant ethical guidelines for field sampling. We confirm that all plant and soil samples were collected from publicly accessible agricultural lands. No sampling occurred on private or restricted-access areas, and thus no landowner permissions were required for this study.

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Zhang, Y., Li, X., Kong, F. et al. Trace metal pollution and ecological effects on five crops around a typical manganese mining area in Chongqing, China.
Sci Rep (2026). https://doi.org/10.1038/s41598-026-37535-6

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  • DOI: https://doi.org/10.1038/s41598-026-37535-6

Keywords

  • Manganese mine
  • Trace metal
  • Crops
  • Bioconcentration
  • Ecological risk
  • Health risk


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