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Vegetation recovery following retrogressive thaw slumps across northern tundra regions


Abstract

Warming permafrost is driving widespread terrain destabilization and collapse through retrogressive thaw slumps, stripping vegetation and releasing soil carbon. Despite increasing thaw slump disturbances in permafrost regions, the time and patterns of vegetation recovery remain uncertain. Here we estimate surface greenness recovery times and compositional changes following disturbances across northern tundra regions, using data from remote sensing imagery. Our findings reveal that low-stature vegetation recolonizes barren terrain in low-Arctic sites within a decade, followed by erect shrubs, resulting in greener surface than undisturbed areas. In contrast, vegetation recovery in high-Arctic and high-elevation sites requires over 30 years. Greenness recovery time (τ, years) varies widely but can be accurately predicted by a power-law function (1.35 × (GPP)−1.68, P < 0.05) based on solar-induced chlorophyll fluorescence-derived ecosystem gross primary productivity (GPP, kgC m−2 yr−1). We present a regionally scalable framework to quantify surface greenness recovery times and reveal divergent vegetation succession pathways following permafrost disturbances across tundra regions.

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Main

Recent observations across Arctic and alpine regions reveal substantial greening and browning trends in response to disturbances, such as retrogressive thaw slumps (RTS)1,2 in ice-rich permafrost regions3. Over recent decades, RTS activity has increased dramatically4,5,6, with a 60-fold rise observed on Banks Island in the Canadian High Arctic from 1984 to 20157 and a threefold expansion on the Qinghai–Tibet Plateau between 2016 and 20228. RTS occur throughout the Northern Hemisphere permafrost regions9,10, eroding plant structures (including roots and aboveground biomass), mobilizing previously thawed sediments and soil organic carbon, thereby reducing ecosystem carbon sequestration and increasing microbial decomposition11,12,13,14,15,16. Nonetheless, RTS can stabilize once ground ice is depleted or insulated by sediments17,18, allowing vegetation succession (gradual process of change in the composition of plant communities over time) to recolonize disturbed areas19, increasing carbon sequestration. However, the stabilized RTS can re-activate within their disturbed boundaries when a deeper thaw occurs or when ground ice is re-exposed. Consequently, these RTS are considered chronic mass-wasting sites with long-term polycyclic activity (decades to centuries), resulting in complex morphologies and heterogeneous plant compositions20,21,22. Indeed, the close relationship between plant community composition and the stage of stabilization is well-known and recorded as chronosequences for several RTS field sites18,23,24,25, yet to date there is limited information for the Northern Hemisphere as a whole about any regional differences of vegetation recovery in terms of timing, composition and succession.

Vegetation greenness can be assessed across large regions using multidecadal satellite-derived normalized difference vegetation index (NDVI) data3,26,27,28, which serve as an effective proxy for plant productivity. For instance, in Siberian boreal forests, MODIS-derived NDVI indicated greenness recovery (that is, same levels of landscape greenness) 13 years after wildfire disturbance29. Similarly, in Alaskan tundra dominated by lichens, mosses and dwarf shrubs, NDVI values of burned areas returned to undisturbed levels within 10 years, closely corresponding with the recovery time of functional plant diversity30. The growing availability of high-resolution satellite imagery has enhanced NDVI-based assessments, enabling precise detection and monitoring of regional vegetation change trajectories.

Vegetation recovery patterns following RTS disturbances vary widely across tundra regions. For example, in western Siberia, disturbed RTS terrain typically recovers to spectral NDVI levels comparable to undisturbed areas within 20 years31. In contrast, on the Qinghai–Tibet Plateau, disturbed areas often remain largely barren even after 20 years32,33. Recolonization rates in permafrost-affected terrain are influenced by a range of factors, including regional climate (for example, temperature and precipitation)31, soil properties (for example, nutrient and moisture availability and soil texture)34, species-specific traits (reproductive effort and dispersal mechanisms)35,36 and ecological processes (species interactions and succession)37. Despite these insights, vegetation recovery times in RTS remain poorly quantified. The high spatial and temporal variability, driven by dynamic biogeomorphic processes, presents a critical knowledge gap for understanding the resilience of aboveground carbon sequestration in response to widespread permafrost disturbances.

We evaluate the postdisturbance trajectories of vegetation recovery and succession across 12 slump-affected regions in the northern permafrost region. Using time-series image analysis and space-for-time substitution, we incorporate data from repeat satellite, airborne and uncrewed aerial system (UAS) surveys. Vegetation recovery time is defined as the number of years required for NDVI in RTS to return to undisturbed levels, serving as a proxy for recovery in carbon sequestration28,38. To further investigate the ecological processes underlying spectral greening, we characterize vegetation succession, which represents the change in plant composition over time in response to disturbance. These vegetation change metrics are estimated for eight tundra permafrost ecosystems39 across the Northern Hemisphere, including sites in Alaska, Canada, Siberia and the Qinghai–Tibet Plateau (Fig. 1). The study regions represent diverse plant compositions, nutrient availability and climate conditions, which include (1) Noatak River Watershed (NT) in northwestern Alaska, (2) Brooks Foothills near Toolik Lake (TL) in northern Alaska, (3) Mackenzie Delta (MD) in northwestern Canada, (4) western Banks Island (WB) and (5) eastern Banks Island (EB) in northern Canada, (6) Yamal Peninsula (YP) in western Siberia, (7) central Qinghai–Tibet Plateau (CQ) and (8) western Qinghai–Tibet Plateau (WQ). Detailed site descriptions are provided in Methods. We use PlanetScope imagery40 (2016–2024) to construct contemporary greening trajectories based on RTS chronosequences (Extended Data Fig. 1). Piecewise regression41 identifies breakpoints in NDVI trends, segmenting the time series into distinct stages: undisturbed, initial disturbance, recovery and stabilization. Patterns of vegetation change in RTS are assessed using plant functional types (PFTs) derived from ground surveys, very-high-resolution (<60 cm) satellite, airborne or UAS multispectral imagery from each tundra region, providing insights into associated greenness trends. This study represents the first large-scale assessments of vegetation recovery and succession following RTS disturbance, revealing recovery to vary between years (low-Arctic) to decades (high-Arctic and high-elevation). Notably, the recovery time can be approximated by a model based on a single metric: regional gross primary productivity (GPP) derived from solar-induced chlorophyll fluorescence observations by the Orbiting Carbon Observatory-2 (GOSIF). Model validation using four independent sites, with locations shown in Fig. 1, further confirmed these findings.

Fig. 1: Time series of NDVI and the associated changes in PFT cover for each ecosystem.

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Coloured dots and grey plus symbols represent mean NDVI values for each RTS subpart, segmented by identified breakpoints (indicated by vertical lines). PFT cover is visualized using a ternary diagram showing the proportions of low-stature vegetation, erect shrubs and bare ground. Each dot (RTS subpart) is colour-coded on the basis of its PFT classification. The RTS subparts that lack vegetation surveys are shown in plus symbols. Black lines represent best-fit NDVI piecewise trends, with the grey bands representing the 95% confidence intervals. The red triangles on the map indicate the locations of four validation sites, including CR, PP, HI and TP. The basemap shows the circumpolar permafrost extent map. Basemap data from the US National Snow and Ice Data Center/World Data Center for Glaciology61.

Source data

Vegetation recovery varied across ecosystems

Greenness recovery following RTS initiation was rapid in low-Arctic sites but considerably slower in high-Arctic and high-elevation sites, where stable RTS often remained partly barren for decades. In the low-Arctic regions of TL, NT, MD and YP, the NDVI values in undisturbed areas are 0.62 ± 0.03 0.80 ± 0.03, 0.77 ± 0.04 and 0.68 ± 0.03, respectively. Following disturbance, NDVI recovered rapidly to undisturbed levels (0.65, 0.80, 0.75 and 0.69, respectively) within 5–10 years (7.6 ± 0.7 years, 6.1 ± 0.9 years, 5.4 ± 0.9 years and 9.3 ± 0.6 years, respectively), after which vegetation greenness remained stable with only slight increases (Fig. 1). In contrast, recovery in the CQ, WQ, WB and EB regions of the high-Arctic was markedly slower, exhibiting a gradual increasing trend over several decades. These trends indicate that it requires ~49.4 ± 4.4 years, 103.9 ± 90.1 years, 34.6 ± 5.0 years and 105.0 ± 35.8 years for NDVI to recover, respectively (Fig. 1). The greater uncertainty in WQ and EB estimates probably reflects sparse vegetation cover, slower recovery rates and the limited observation period (that is, only 17 years of observations for WQ).

Vegetation succession

Patterns in vegetation succession varied across tundra regions (Figs. 1 and 2), with rates of change in low-stature vegetation and erect shrubs diverging between low- and high-Arctic and high-elevation sites. In low-Arctic sites (MD, NT, TL and YP), low-stature vegetation rapidly colonized RTS sites within 5–10 years postdisturbance, driving rapid greening (Figs. 1 and 2). Over the following decades, low-stature vegetation was progressively replaced by erect shrubs, the coverage of which is even higher than that of the undisturbed areas (Fig. 2). These estimates align well with local geobotanical surveys in YP42. Conversely, vegetation recovery was substantially slower in high-Arctic (WB and EB) and high-elevation (WQ and CQ) sites. Low-stature vegetation was re-established after ~30 years in WB and 50 years in CQ. However, the shorter observation periods of PFT in EB (31 years) and WQ (14 years) showed only minimal increases in vegetation cover, suggesting that full recovery in these regions may take substantially longer.

Fig. 2: Temporal patterns of vegetation cover change across low- and high-Arctic and high-elevation sites.

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ah, The study regions shown are EB (a), WB (b), CQ (c), WQ (d), NT (e), MD (f), TL (g) and YP (h). The red, yellow and blue colours represent bare ground, low-stature vegetation and erect shrubs, respectively. The x axis uses a nonlinear scale to emphasize the rapid vegetation recovery in low-Arctic regions within the first decade after disturbance.

Source data

RTS greenness recovery time is related to regional GPP

The variation in NDVI recovery times may be attributed to local and regional factors such as nutrient availability, soil moisture, plant diversity and climate—variables that are broadly represented by regional GPP43. To explore this relationship, we analysed RTS greenness recovery time in relation to GPP data derived from GOSIF44, averaged over the period from 2001 to 2024 (Methods). Excluding the WQ region, where GOSIF-estimated GPP is zero, we identified a power-law relationship between recovery time ((tau), years) and GPP (kgC m−2 yr−1) as τ = 1.35 × (GPP)−1.68, P < 0.05, R2 = 0.97 (Fig. 3). The parameter errors for the scaling factor and the exponent are 0.41 and 0.25, respectively. This relationship suggests that recovery times following thaw-driven disturbance across northern permafrost regions can be readily estimated using regional-scale tundra productivity datasets. Ecosystems with higher productivity exhibited faster recovery. However, notable uncertainty in recovery estimates was observed at extremely low-productivity sites, such as EB, where sparse vegetation cover complicates NDVI trend detection and contributes to increased uncertainty.

Fig. 3: Relationship between greenness recovery time and mean annual GPP from GOSIF (2001–2024).

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Each point represents one regional RTS site mean and standard error. The outlined black circles represent the recovery time of four RTS validation sites, estimated from very-high-resolution optical images. The shaded area indicates the 95% confidence interval of the power-law function. The statistical tests were two-sided. The P values for the scaling factor of 1.35 and the exponent of −1.68 are 0.0169 and 0.0005, respectively. No multiple-comparison correction was applied.

Source data

Additionally, we assessed the influence of climate by comparing RTS recovery times with regional temperature and precipitation data from ERA5-land, averaged over the same period (2001–2024). No strong relationships were found between recovery time and either temperature or precipitation (Extended Data Fig. 2), suggesting that the climate factors alone do not dominate the vegetation recovery.

To further validate the model, we applied it to four independent RTS sites from different permafrost regions, which included the Peel Plateau (PP), Chukotskiy Rayon (CR), Taymyr Peninsula (TP) and Herschel Island (HI), with mean GPP values of 0.56, 0.36, 0.26 and 0.18 kgC m−2 yr−1, respectively. Estimated NDVI recovery times based on individual RTS chronosequence for these sites were 4 , 6 , 9 and 25 years, respectively (Extended Data Fig. 3), which correspond well with the model predictions of 3.6 ± 0.5, 7.4 ± 0.5, 13.0 ± 1.0 and 24.1 ± 3.0, respectively (Fig. 3).

Discussion

Vegetation greenness recovery times in RTS varied widely across permafrost regions. In low-Arctic regions, recovery occurred within 10 years, while recovery required several decades to over a century in high-elevation and high-Arctic regions. Faster recovery in low-Arctic sites such as NT, TL, MD and YP is probably driven by more favourable conditions, including higher nutrient availability, reduced dispersal limitation and greater moisture availability from precipitation and snow melt. Vegetation recovery on the Qinghai–Tibet Plateau and Banks Island was markedly slower. On the forb- and graminoid-dominated Tibetan Plateau45,46, NDVI recovery spans decades. Recovery in CQ takes ~50 years; whereas in WQ, where initial GPP is near zero, recovery may require up to a century. The harsher climate in WQ, with lower mean annual temperatures (−11 °C in WQ versus −6 °C in CQ) and drier conditions (annual precipitation 339 mm in WQ versus 579 mm in CQ), further limits vegetation regrowth. In the prostrate-shrub tundra of WB and EB47, NDVI values reached undisturbed levels after ~30 years and nearly a century. Recovery in EB was substantially slower than in WB, despite similar climate conditions (annual precipitation 233 mm in EB and 227 mm in WB; mean air temperature −13 °C in EB and −12 °C in WB; Supplementary Table 1). Instead, slower EB recovery rates probably reflect drier, highly calcareous gravelly tills that dominate the region48. Across these regions, slow recovery thus appears linked to constraints such as low mean annual air temperatures (EB, WB and WQ), limited annual precipitation (EB, WB and WQ), strong solar radiation (CQ and WQ)49 and nutrient-poor soils (CQ, WQ and WB)50.

During recovery, NDVI values within RTS scars returned to undisturbed levels as early colonizers (for example, forbs, graminoids and shrubs) began to dominate the terrain (Fig. 4a). Rapid NDVI recovery in low-Arctic sites was probably driven by the early colonization of low-stature vegetation, including mosses, graminoids and short dwarf shrubs (Fig. 4b–d,f). Over the following 10–50 years, erect shrubs gradually established and stabilized the terrain, potentially acting as catalysts for further vegetation change51 and enhancing carbon sequestration52, thereby contributing to a negative feedback that enhances carbon uptake potential. Although NDVI values may be at a similar level, the vegetation composition in these disturbed areas differs. Spectral recovery is therefore not synonymous with ecological recovery, as observed in other disturbance works53. Comparisons between disturbed and undisturbed terrain reveal a clear state change in vegetation composition, such as tussock-shrub tundra transitioning to shrub tundra (Fig. 4b–d,f). Under conditions of increased nutrient and moisture availability, shrubs not only expand in coverage but also exhibit trait changes, including increased height relative to undisturbed areas (Fig. 4b,c). The classification of ‘undisturbed’ terrains in this study is based on the best-available knowledge and data. However, it is important to note that some areas categorized as undisturbed may have experienced past disturbances that are no longer detectable in modern imagery or records.

Fig. 4: The conceptual model of vegetation succession, together with the examples in sites TL, NT, YP, CQ and PP.

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a, A conceptual model depicting vegetation succession after the RTS disturbance. b,c,e, Ground photos (sampled using a 50 × 50 cm2 quadrat) and UAS images of vegetation in TL (b), NT (c) and CQ (e). d,f, UAS images of vegetation in YP (d) and one validation site, PP (f). Scale bars (d,f): 50 cm. The first column depicts undisturbed vegetation composition. The second column illustrates land cover immediately after RTS disturbance. The third and fourth columns document vegetation succession, showing a transition from graminoid/forb-dominated landscapes to shrub tundra communities. Notably, no shrubs were observed in CQ. Credit: plant illustrations in a, University of Maryland Center for Environmental Science Integration and Application Network under a Creative Commons licence CC BY-SA 4.0 (graminoid, forb, detritus, Kim Kraeer and Lucy Van Essen-Fishman; low shrub, seedling, Tracy Saxby; seeds, Catherine Collier; moss, Sidney Anderson; tall shrub, Jane Hawkey).

Recovery and succession of vegetation may be influenced by nutrient availability, initial plant communities and climatic conditions. Nutrient limitation is a key constraint on vegetation growth in permafrost regions54,55, particularly on the Qinghai–Tibet Plateau, where organic layers are shallow and leaching is common. Even after several decades, graminoids and forbs continue to dominate the recovered scars in CQ (Figs. 2 and 4e), probably due to the lack of nearby shrub seed sources and harsh environmental conditions that inhibit the establishment of more productive species. In high-Arctic WB and EB, low-stature vegetation, including graminoids, forbs and dwarf shrubs47, has dominated disturbed areas for decades, with minimal shifts in community composition, also probably due to the harsh climate that limits plant growth. In contrast, more southerly ecosystems in northern Alaska, northwest Canada and western Siberia benefit from nutrient-rich soil, suitable summer temperature and higher soil water content due to precipitation and snow melt, which supports seed germination, nutrient availability and root development, ultimately accelerating vegetation regrowth.

The rates of vegetation recovery following RTS disturbances in tundra regions occur more slowly than in drained thermokarst lake basins but are generally faster than recovery following wildfires across the low-Arctic regions. For example, postfire vegetation in boreal Siberia forests typically recovers within ~13 years29, while Alaskan tundra dominated by dwarf shrubs recovers in ~10 years30. In contrast, vegetation in drained thermokarst lake basins can re-establish within just 2 years56. Postfire successional patterns in Alaskan tundra also indicate rapid resprouting of vascular plants and Sphagnum moss, followed by a shift towards shrub-dominated communities as nutrient availability increases, resulting in greenness levels that can exceed those of undisturbed areas30, which is similar to that post-RTS disturbance.

The variability in vegetation recovery times across tundra ecosystems can be effectively estimated using regional-scale GPP through a power-law relationship. Validated by four independent regions, we found that ecosystems with higher GPP generally exhibited faster recovery following RTS disturbances. This predictive capability probably stems from the strong associations between high GPP and factors such as suitable climate, greater plant species diversity57,58, adequate nutrient availability and high soil moisture—all of which enhance vegetation growth and ecosystem resilience38. Diverse ecosystems often host a broader array of plant species with varied strategies for growth, survival, seed dispersal and reproduction, as well as expanded plant reproduction and dispersal59, collectively promoting faster recovery and the restoration of ecological functions. For instance, ecosystems with a higher diversity of graminoid and shrub species exhibited notably shorter recovery times. Importantly, although we successfully predicted the recovery of surface greenness over several years to decades, plant species diversity did not fully return within the time frame of this study19 (Fig. 4b,d,f).

Although RTS are spatially limited—occurring only in areas with ice-rich permafrost, gentle slopes and specific soil characteristics, the ongoing warming of high-latitude and high-elevation regions is making areas with ice-rich permafrost increasingly vulnerable to these disturbances. RTS accelerate soil carbon mobilization and vegetation removal, but in high-productivity tundra regions, disturbed microsites can foster warmer, nutrient-rich and moist conditions that support rapid vegetation regrowth55. In such environments, surface greenness often recovers within a decade and may later exceed that of the surrounding undisturbed areas, contributing positively to carbon sequestration. However, in high-Arctic and high-elevation regions, unfavourable environmental conditions leave ground surfaces exposed for decades. As RTS continue to expand across permafrost landscapes4,6,7,8,60, this study provides critical insights into the spatiotemporal variability in vegetation succession, surface greening and browning, which reflect carbon sequestration following permafrost disturbances across northern tundra regions.

Methods

Study areas and datasets

We selected eight study areas (Supplementary Table 1) located in various tundra ecosystems, including NT and TL, MD, WB and EB, YP and CQ and WQ. The ecosystem of NT and TL is characterized by Arctic tussock-shrub and low-shrub tundra. The MD study area is located in northwestern Canada, on the tundra uplands east of the MD that are characterized by rolling hills and small lakes62 and where tall shrub tundra and erect dwarf shrub tundra dominate. WB and EB are located in the high-Arctic tundra, where sedge, dwarf shrubs, prostrate dwarf shrubs and moss tundra are dominant47. YP is located within an Arctic tundra, a dissected lowland with long slopes composed of sandy clay deposits in western Siberia63,64, with erect dwarf shrubs, dwarf shrubs, sedge and moss tundra distributed47. Meanwhile, the CQ and WQ host high-elevation alpine meadows and grasslands with specialized species that are resilient to extreme high elevations. Four additional RTS sites in CR, TP, HI and PP served as validation locations. The CR and TP are located in eastern and northern Siberia, characterized by sedge and dwarf shrubs47. HI, located in the northernmost part of Canada, is covered by fine-grained marine sediments65 and characterized by tussock sedge, dwarf shrub and moss tundra47. The PP in northwestern Canada is dominated by woodlands, shrubs and dwarf shrubs66.

The core datasets (Supplementary Table 2) used to delineate the RTS include PlanetScope images from 2016 to 2024, Landsat-5 and Landsat-7 images (1984–2010)67. High-resolution images include Geoeye-1 (2009–2024), QuickBird-2 (2002–2014) and WorldView-1–3 (2007–2024), Keyhole-4 and Keyhole-9 images since 196568,69, Aerial Photo Single Frames (1937–2014)70, Aerial Images (1952, 1970), airborne imagery in 2023 and UAS images since 2017. The PlanetScope images from 2016 to 2024 were applied to calculate the NDVI maps. We also applied Harmonized Landsat and Sentinel-2 (HLS) products, which provide the bidirectional reflectance distribution function (BRDF) adjusted Landsat and Sentinel-2 images, to calibrate the PlanetScope images. The optical images from UAS and airborne (<0.1 m), as well as high-resolution satellite imagery (around 0.5 m) since 2016, were used to calculate the percentage cover of PFTs. Then, we averaged the Orbiting Carbon Observatory-2 based, solar-induced chlorophyll fluorescence (GOSIF) derived GPP44 in 0.05° × 0.05° resolution since 2001 to measure the growth of the terrestrial vegetation. The monthly mean air temperature and precipitation were collected from the ERA5-land reanalysis data71.

To further analyse the site distributions, we used topographic, vegetation, permafrost distribution and soil datasets, including (1) vegetation type (data source—the circumpolar Arctic vegetation map, description of western Canada landscapes and landforms66 and Wang et al.72), (2) digital elevation model from the shuttle radar topography mission73, (3) soil textures74 and (4) permafrost map75.

Generating NDVI time series

We used space-for-time substitution (thaw slump chronosequence)76 to examine changes in greenness before, during and after RTS disturbance (Extended Data Fig. 1). The chronosequence includes RTS initiated in different years and undisturbed land. First, for each regional ecosystem, we selected at least 15 representative RTS (Supplementary Table 1), identified as either active from headwall expansion in recent years or stabilized for decades. We modified and delineated the disturbed area for every RTS based on the published inventories7,8,77,78 and the high-resolution images. Then, we divided it into subparts according to the respective initiation years. Reactivated RTS were treated as new perturbation phases in our analyses, as debris deposition resets portions of the thaw slump scar by removing or covering vegetation and can alter soil moisture and nutrient status. We identified several undisturbed areas near the RTS to serve as controls for modelling undisturbed conditions. The NDVI time series of RTS, obtained from PlanetScope images (2016–2024), were used to evaluate the vegetation recovery times. To generate NDVI maps (Extended Data Fig. 4), we first downloaded the PlanetScope images using bounding boxes (at least 2 × 2 km2) covering RTS-disturbed areas to provide sufficient valid pixels after quality control. The orthorectified PlanetScope images, including red, green, blue and near-infrared bands, as well as the quality-control layer, can be obtained through https://www.planet.com/. Unusable data mask layers were applied to the PlanetScope images to remove low-quality pixels. As the PlanetScope images are subject to the BRDF effect, which results from varying illumination and sensor viewing angles during image acquisition, we cross-calibrated PlanetScope surface reflectance based on the BRDF-adjusted HLS products. We filtered the HLS based on its band-specific quality control (QA layer) to retain high-quality pixels that are not affected by heavy cloud cover. Then, we selected one HLS image that contained the most valid pixels during every peak-growing season. The peak-growing season was determined for each subregion using long-term (2000–2024) local phenological patterns of NDVI from Landsat-7 and Landsat-8 (ref. 79). For each year, we selected one PlanetScope image acquired within the nearest 10 days relative to the HLS image.

To generate the consistent NDVI time series, we first coregistered the yearly PlanetScope images based on HLS images using AROSICS80. Then, we cross-calibrated PlanetScope surface reflectance based on the corresponding HLS images using histogram matching81. The method first upscales the PlanetScope images to the HLS resolution and calculates the band-specific histograms. A linear transformation was then applied to downsampled PlanetScope images to match the mean and standard deviation with those of the HLS data. The recorded band-specific adjustment coefficients were applied to the original resolution of PlanetScope images. Finally, we calculated the NDVI as (near-infrared − red)/(near-infrared + red).

We then averaged the NDVI values on the basis of the RTS delineation-derived subparts and created NDVI time series according to the initiation years of these subparts. To understand how vegetation changes since initiation, we transferred the timescale from the calendar year of the images to the number of years that have occurred since RTS initiation (Extended Data Fig. 1). Assuming RTS in the surrounding areas with similar climate conditions and vegetation cover would exhibit similar vegetation recovery trajectories, we generated the NDVI time series using all the selected RTS within each regional ecosystem.

Estimating NDVI recovery time

The pronounced difference in vegetation cover before and after RTS initiation separates the NDVI time series into several segments. To best fit the NDVI trend, we applied a piecewise regression method41 to separate the NDVI time series into distinct periods: undisturbed, disturbance, recovery and stabilization (where applicable, as not all regional ecosystems exhibited a stabilization period). For each period, we applied linear regression to estimate the trend. Finally, we estimated the recovery time of NDVI as the number of years required for NDVI values to return to predisturbance levels or become stable. For the ecosystems with a stabilization period, the recovery time was determined as the temporal separation between the breaking points of the recovery and stabilization periods. For ecosystems without a stable trend in the recorded NDVI timescales, we hypothesized that the NDVI value would continue increasing at the same rate until reaching undisturbed levels, then turn stable. The recovery time was estimated from the difference between the average NDVI value before the RTS disturbance and the NDVI value at the time of disturbance, divided by the subsequent recovery trend. The uncertainty of the recovery time was estimated by accounting for the trend uncertainty.

Linking PFT cover fraction with NDVI

We generated PFT maps in the same year as PlanetScope images using UAS, Geoeye-1, QuickBird-2 and WorldView-1–3 images. To enhance the spatial resolution of the composited red–green–blue images for visual interpretation, we applied pan-sharpening to the multispectral bands using the panchromatic band for GeoEye-1, QuickBird-2 and WorldView-2 and -3. To match the resolution of the PlanetScope images, we divided the high-resolution images into 3 × 3 m² grids. We classified the vegetation cover into three PFTs: bare ground, low-stature vegetation and erect shrub and manually assigned the type to every grid based on the textures and colours observed in the images (Extended Data Fig. 5). Although the resolution of satellite-based images is relatively low (~50 cm), the greener colour and coarser texture of erect shrubs presented in the images help us differentiate them from low-stature vegetation. The percentage of PFT cover was calculated for each RTS subpart. Using these percentage cover values, we generated composite colours (red for bare ground, blue for erect shrubs and yellow for low-stature vegetation) and assigned these colours to the corresponding NDVI time series (for example, Fig. 1).

Fitting relationship between GPP and recovery time

We used orthogonal distance regression to fit a power-law model between the NDVI recovery time and the mean GPP across the regional ecosystem while accounting for the errors in both variables. To mitigate interannual variability of GPP, which was observed in both tower-measured and estimated data44, we averaged GOSIF GPP over 2001–2024 and calculated annual standard deviations. Regional mean GPP was then computed within 2.5-km buffer zones around RTS sites, with pixel-level errors propagated throughout the analysis. In addition, when fitting the power-law model, we added the associated error bars from the site-level variability in recovery time (vertical error bars) and the regional variation of GPP (horizontal error bars). On the basis of the covariance matrix of the best-fit model, we calculated the confidence interval. We also set lower (0.05 kgC m−2 yr−1) and upper (0.6 kgC m−2 yr−1) bounds of the function based on the distribution of GPP in permafrost areas covered with graminoid and shrubs, respectively. To validate the fitted model, we chose four independent RTS sites in CR, PP, HI and TP (Fig. 1). The selected RTS (Extended Data Fig. 3) with subparts initiated at different times, with the colours in the high-resolution images indicating when the greenness recovers. We compared the recovery time with the model-inferred ones to validate the performance of the model.

Data availability

The PlanetScope images can be obtained through https://www.planet.com/. The HLS, Landsat-5 and Landsat-7, GOSIF GPP and ERA5-land data can be downloaded from Google Earth Engine. The Keyhole-4 and Keyhole-9 images can be accessed through https://earthexplorer.usgs.gov/. The aerial images can be downloaded through https://earthexplorer.usgs.gov/. The GeoEye-1, QuickBird-2 and WorldView-1–3 can be obtained through Maxar (https://xpress.maxar.com/). The UAS and airborne images are available at the Arctic Data Center (https://arcticdata.io). The histogram matching is based on the open-source Google Earth Engine Python API package (https://github.com/google/earthengine-community). Braun–Blanquet phytosociological data on the YP are available on request at the Arctic Vegetation Archive (https://avarus.space). The data used to generate the figures are available via GitHub at https://github.com/Summer0328/Vegetation-recovery.gitSource data are provided with this paper.

Code availability

Python code used to perform piecewise regression and results analysis is available via Zenodo at https://doi.org/10.5281/zenodo.18746137 (ref. 82).

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Acknowledgements

This research was supported by the National Key Research and Development Program of China (2020YFA0608501), awarded to T.W. and X.Z., and the National Science Foundation, Environmental Engineering Program (EnvE-1928048) and NASA-ABoVE (80NSSC22K1254) to M.J.L. Z.X. and L.L. were supported by the Hong Kong Research Grants Council (N_CUHK434/21 and CUHK14303119), CUHK Direct Grant for Research (4053644), CUHK Resource Allocation Committee (4720306) and the Guangdong Science and Technology Department (2025A0505000062). We thank J. Zhao, J. Bai and X. Ma for facilitating us to collect ground photos in the central Tibetan Plateau. The MD and PP datasets are part of a long-term permafrost monitoring and research programme within the Government of Northwest Territories by the NWT Geological Survey and NWT Centre for Geomatics. Any use of trade, firm or product names is for descriptive purposes only and does not imply endorsement by the US Government. Geospatial support for this work provided by the Polar Geospatial Center under NSF-OPP awards 1043681, 1559691 and 2129685. K.E. and A.K. were supported by the state assignment of the Ministry of Science and Higher Education of the Russian Federation (theme nos. FWRZ-2021-0012 and FWRZ-2026-0016). N.N. was supported by the DAAD “STIBET-I”. I.N. and N.N. were supported by BMWK project ML4EARTH and the Google.org Impact Challenge on Climate Innovation for the Permafrost Discovery Gateway development team.

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Contributions

M.J.L., L.L. and Z.X. designed the study. Z.X. led the research and performed the analyses described in the main text and supporting information. M.J.L. provided the PlanetScope images and high-resolution imagery in all study areas. L.L. provided the historical images of the Qinghai–Tibet Plateau. I.N. and N.N. contributed to the method design in the beginning. I.N. provided airborne images in the MD. J.v.d.S. provided the UAS images in PP. E.C.H. provided the UAS images in Noatak and Toolik. X.Z., T.W., Z.X. and L.L. provided the UAS images in the Qinghai–Tibet Plateau. R.K., A.K. and N.N. provided the UAS images in the YP. K.E. provided Braun–Blanquet phytosociological data on the YP, including complete species lists with percentage coverage, microsite environmental characteristics and the successional dynamics of the plant communities, along with estimates of landslide age. All authors contributed to the writing and review of the paper.

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Lin Liu or Mark J. Lara.

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Nature Climate Change thanks Greg Henry, Fujun Niu and the other, anonymous, reviewer(s) for their contribution to the peer review of this work.

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Extended data

Extended Data Fig. 1 Schematic diagram of a thaw slump chronosequence used to quantify changes in vegetation greenness before, during, and after RTS disturbance.

Black polygons delineate thaw slump boundaries, with filled colors indicating areas initiated in different years. Graminoid symbols depict greenness, estimated using NDVI.

Extended Data Fig. 2 Relationship between retrogressive thaw slump (RTS) recovery time and mean annual precipitation and air temperature.

Panels (a) and (b) illustrate the relationships between RTS recovery time and mean annual precipitation and air temperature, respectively. Grey bars show the standard deviation of the mean recovery time for each ecosystem. Each dot represents one ecosystem. The sample sizes for obtaining the recovery time are labeled in (a). Outlier sites CQ and WQ, despite relatively warm and wet conditions, exhibit delayed recovery dominated by graminoid vegetation compared to other sites with similar climates.

Source data

Extended Data Fig. 3 The recovery time of RTSs in validation sites obtained from the historical images.

Specifically, it includes validation sites in (a) Peel Plateau, (b) Chukotskiy Rayon, (c) Taymyr Peninsula, and (d) Herschel Island. White numbers indicate years since the most recent RTS disturbance inferred from the historical images. Credit: Background WorldView 2-3 imagery © 2026 Vantor.

Extended Data Fig. 4 Workflow for generating NDVI maps.

Input datasets include Harmonized Landsat and Sentinel-2 (HLS) products and PlanetScope imagery.

Extended Data Fig. 5 Example of generating a plant functional type (PFT) map.

(a) UAS image from the Yamal Peninsula. (b) Examples of three vegetation cover classes: erect shrubs, low-stature vegetation, and bare ground. (c) PFT map produced by manual classification of the UAS image using a 3 × 3 m grid.

Supplementary information

Supplementary Information (download PDF )

Supplementary Tables 1 and 2.

Source data

Source Data (download XLSX )

Statistical source data for Figs. 1–3 and Extended Data Fig. 2.

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Xia, Z., Liu, L., Nitze, I. et al. Vegetation recovery following retrogressive thaw slumps across northern tundra regions.
Nat. Clim. Chang. (2026). https://doi.org/10.1038/s41558-026-02603-2

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