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Synergistic effects of biochar and nitrogen fertilizer enhance soil carbon emissions and microbial diversity in acidic orchard soils


Abstract

To explore the synergistic effects of biochar and nitrogen fertilizer on soil carbon emission and microbial diversity in acidic orchards were studied. A 300-day pot experiment was conducted, including control (CK), nitrogen fertilizer (N), 1% biochar (B1), 3% biochar (B3), nitrogen fertilizer with 1% biochar (NB1), and nitrogen fertilizer with 3% biochar application (NB3). After biochar and nitrogen fertilizer treatments, soil pH increased from 4.73 to 6.75 unit, soil organic carbon (SOC), mineral-associated organic carbon (MAOC) and particulate organic carbon (POC) contents increased 17.88%–41.14%, 31.95%–73.44% and 15.50%–48.90%, respectively, Dissolved organic carbon (DOC) content decreased by 33.56%–55.35%. The release of CO2–C increased by 0.73%–232.43%, with the synergistic effect of NB3 being the most significant. NB1 and B1 reduced VOCs-C release, while NB3 and B3 increased VOCs-C release. B1 and B3 significantly enhanced the abundance of Bradyrhizobium, while decreasing the abundance of Streptomyces and Streptacidiphilus, NB3 exhibited opposite trends. Compared with CK, B1 and B3 increased the abundance of acyl-CoA dehydrogenase (acdA), and NB1 and NB3 reduced the abundance of β-galactosidase (β-gaL) and glucosidase (GA). Correlation analysis showed that the release of CO2-C was significantly positively correlated with MAOC and negatively correlated with DOC, while VOCs-C was significantly negatively correlated with DOC. This synergistic effect of biochar and nitrogen fertilizer has positive implications for improving soil health and represents a viable strategy for sustainable agricultural practices.

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Data availability

The datasets used and/or analyzed during the current study available from the corresponding author on reasonable request.

References

  1. Schmidt, H. P. et al. Pyrogenic carbon capture and storage. 11, 573-591. (Wiley, 2019).

  2. Hu, X. J. et al. Metagenomics reveals divergent functional profiles of soil carbon and nitrogen cycling under long-term addition of chemical and organic fertilizers in the black soil region. Geoderma 418, 115846 (2022).

    Google Scholar 

  3. Liang, C., Amelung, W., Lehmann, J. & Kästner, M. Quantitative assessment of microbial necromass contribution to soil organic matter. Glob. Change Biol. 25, 3578–3590 (2019).

    Google Scholar 

  4. Zhang, C. Y. et al. Spatial-temporal characteristics of carbon emissions from land use change in Yellow River Delta region, China. Ecol. Indic. 136, 108623 (2022).

    Google Scholar 

  5. Zhao, Y. P. et al. Sphagnum increases soil’s sequestration capacity of mineral-associated organic carbon via activating metal oxides. Nat. Commun. 14, 5052 (2023).

    Google Scholar 

  6. Andrea, J. et al. Minerals in the rhizosphere: Overlooked mediators of soil nitrogen availability to plants and microbes. Biogeochemistry 139, 103–122 (2018).

    Google Scholar 

  7. Wu, H. W. et al. Unveiling the crucial role of soil microorganisms in carbon cycling: A review. Sci. Total Environ. 909, 168627 (2024).

    Google Scholar 

  8. Chen, H. Y., Zhu, T., Li, B., Fang, C. M. & Nie, M. The thermal response of soil microbial methanogenesis decreases in magnitude with changing temperature. Nat. Commun. 11, 5733 (2020).

    Google Scholar 

  9. Kuśtrowski, P., Rokicińska, A. & Kondratowicz, T. Chapter nine – abatement of volatile organic compounds emission as a target for various human activities including energy production. Adv. Inorg. Chem. 72, 385–419 (2018).

    Google Scholar 

  10. WMO Greenhouse Gas Bulletin: the state of greenhouse gases in the atmosphere based on global observations through 2020. (2021).

  11. Basheer, S. et al. A review of greenhouse gas emissions from agricultural soil. Sustainability 16, 4789 (2024).

    Google Scholar 

  12. Zheng, G. Y. et al. A new attempt to control volatile organic compounds (VOCs) pollution—Modification technology of biomass for adsorption of VOCs gas. Environ. Pollut. 336, 122451 (2023).

    Google Scholar 

  13. Nguyen, T.-P., Koyama, M. & Nakasaki, K. Effects of oxygen supply rate on organic matter decomposition and microbial communities during composting in a controlled lab-scale composting system. Waste Manag. 153, 275–282 (2022).

    Google Scholar 

  14. Xiang, S. Z. et al. Antibiotics adaptation costs alter carbon sequestration strategies of microorganisms in karst river. Environ. Pollut. 288, 117819 (2021).

    Google Scholar 

  15. Ma, S. S. et al. Effects of the functional membrane covering on the gas emissions and bacterial community during aerobic composting. Biores. Technol. 340, 125660 (2021).

    Google Scholar 

  16. Wang, K., Mao, H. L. & Li, X. K. Functional characteristics and influence factors of microbial community in sewage sludge composting with inorganic bulking agent. Biores. Technol. 249, 527–535 (2018).

    Google Scholar 

  17. Chen, J. et al. Differential responses of carbon-degrading enzymes activities to warming: implications for soil respiration. Glob. Change Biol. 24, 4816–4826 (2018).

    Google Scholar 

  18. Tang, L. et al. Warming counteracts grazing effects on the functional structure of the soil microbial community in a Tibetan grassland. Soil Biol. Biochem. 134, 113–121 (2019).

    Google Scholar 

  19. Zhao, H. Y. et al. Global reactive nitrogen loss in orchard systems: A review. Sci. Total Environ. 821, 153462 (2022).

    Google Scholar 

  20. Repullo-Ruibérriz de Torres, M. A. et al. Cover crop contributions to Improve the soil nitrogen and carbon sequestration in Almond Orchards (SW Spain). Agronomy 11, 387 (2021).

    Google Scholar 

  21. Rodriguez-Ramos, J. C., Scott, N., Marty, J., Kaiser, D. & Hale, L. Cover crops enhance resource availability for soil microorganisms in a pecan orchard. Agric. Ecosyst. Environ. 337, 108049 (2022).

    Google Scholar 

  22. Lal, R. Soil health and carbon management. Food Energy Secur. 5, 212–222 (2016).

    Google Scholar 

  23. Jing, H. et al. The effects of nitrogen addition on soil organic carbon decomposition and microbial C-degradation functional genes abundance in a Pinus tabulaeformis forest. For. Ecol. Manag. 489, 119098 (2021).

    Google Scholar 

  24. Huang, J. X. et al. Organic carbon mineralization in soils of a natural forest and a forest plantation of southeastern China. Geoderma 344, 119–126 (2019).

    Google Scholar 

  25. Neogi, S. et al. Sustainable biochar: A facile strategy for soil and environmental restoration, energy generation, mitigation of global climate change and circular bioeconomy. Chemosphere 293, 133474 (2022).

    Google Scholar 

  26. Wang, C. et al. Effects of biochar amendment on net greenhouse gas emissions and soil fertility in a double rice cropping system: A 4-year field experiment. Agr. Ecosyst. Environ. 262, 83–96 (2018).

    Google Scholar 

  27. Yang, W. et al. Impact of biochar on greenhouse gas emissions and soil carbon sequestration in corn grown under drip irrigation with mulching. Sci. Total Environ. 729, 138752 (2020).

    Google Scholar 

  28. Zeng, L. B. et al. Seaweed-derived nitrogen-rich porous biomass carbon as bifunctional materials for effective electrocatalytic oxygen reduction and high-performance gaseous toluene absorbent. ACS Sustainable Chemistry & Engineering. 7, 5057–5064 (2019).

    Google Scholar 

  29. Wang, J. et al. Effects of ammonium-based nitrogen addition on soil nitrification and nitrogen gas emissions depend on fertilizer-induced changes in pH in a tea plantation soil. Sci. Total Environ. 747, 141340 (2020).

    Google Scholar 

  30. Li, T. T. et al. Contrasting impacts of manure and inorganic fertilizer applications for nine years on soil organic carbon and its labile fractions in bulk soil and soil aggregates. CATENA 194, 104739 (2020).

    Google Scholar 

  31. Oladele, S. O. & Adetunji, A. T. Agro-residue biochar and N fertilizer addition mitigates CO2-C emission and stabilized soil organic carbon pools in a rain-fed agricultural cropland. Int. Soil Water Conserv. Res. 9, 76–86 (2021).

    Google Scholar 

  32. Wang, Y. H. et al. Straw-derived biochar regulates soil enzyme activities, reduces greenhouse gas emissions, and enhances carbon accumulation in farmland under mulching. Field Crop Res. 317, 109547 (2024).

    Google Scholar 

  33. Llusià, J. et al. Contrasting nitrogen and phosphorus fertilization effects on soil terpene exchanges in a tropical forest. Sci. Total Environ. 802, 149769 (2022).

    Google Scholar 

  34. Qiu, Z. J. et al. Distribution characteristics and pollution assessment of phosphorus forms, TOC, and TN in the sediments of Daye Lake, Central China. J. Soils Sediments 23, 1023–1036 (2023).

    Google Scholar 

  35. Ghani, M. I. et al. Variations of soil organic carbon fractions in response to conservative vegetation successions on the Loess Plateau of China. Int. Soil Water Conserv. Res. 11, 561–571 (2023).

    Google Scholar 

  36. Yu, W., Huang, W., Weintraub-Leff, S. R. & Hall, S. J. Where and why do particulate organic matter (POM) and mineral-associated organic matter (MAOM) differ among diverse soils?. Soil Biol. Biochem. 172, 108756 (2022).

    Google Scholar 

  37. Wang, S. Z. et al. Rhizosphere microbial roles in phosphorus cycling during successive plantings of Chinese fir plantations. For. Ecol. Manag. 570, 122227 (2024).

    Google Scholar 

  38. Buchfink, B., Xie, C. & Huson, D. H. Fast and sensitive protein alignment using DIAMOND. Nat. Methods. 12, 59–60 (2015).

    Google Scholar 

  39. Collier, S. M., Ruark, M. D., Oates, L. G., Jokela, W. E., Dell, C. J. Measurement of greenhouse gas flux from agricultural soils using static chambers. J Vis. Exp. JoVE. e52110 (2014).

  40. Gray, C. M., Monson, R. K. & Fierer, N. Biotic and abiotic controls on biogenic volatile organic compound fluxes from a subalpine forest floor. J. Geophys. Res. Biogeosci. 119, 547–556 (2014).

    Google Scholar 

  41. Bai, J. Z. et al. Biochar combined with N fertilization and straw return in wheat-maize agroecosystem: Key practices to enhance crop yields and minimize carbon and nitrogen footprints. Agric. Ecosyst. Environ. 347, 108366 (2023).

    Google Scholar 

  42. Zhu, L. X., Xiao, Q., Fang, S. Y. & Li, S. Q. Effects of biochar and maize straw on the short-term carbon and nitrogen dynamics in a cultivated silty loam in China. Environ. Sci. Pollut. Res. Int. 24, 1019–1029 (2017).

    Google Scholar 

  43. Darby, I. et al. Short-term dynamics of carbon and nitrogen using compost, compost-biochar mixture and organo-mineral biochar. Environ. Sci. Pollut. Res. 23, 11267–11278 (2016).

    Google Scholar 

  44. Yang, Y. et al. Biochar stability and impact on soil organic carbon mineralization depend on biochar processing, aging and soil clay content. Soil Biol. Biochem. 169, 108657 (2022).

    Google Scholar 

  45. Yang, F. J. et al. Fertilizer reduction and biochar amendment promote soil mineral-associated organic carbon, bacterial activity, and enzyme activity in a jasmine garden in southeast China. Sci. Total Environ. 954, 176300 (2024).

    Google Scholar 

  46. Xu, Z. B. & Tsang, D. C. W. Mineral-mediated stability of organic carbon in soil and relevant interaction mechanisms. Eco-Environ. Health. 3, 59–76 (2024).

    Google Scholar 

  47. Yi, Z. et al. Influence mechanisms of iron, aluminum and manganese oxides on the mineralization of organic matter in paddy soil. J. Environ. Manag. 301, 113916 (2022).

    Google Scholar 

  48. Jia, X. Y., Ma, H. Z., Yan, W. M., Shang Guan, Z. P. & Zhong, Y. Q. W. Effects of co-application of biochar and nitrogen fertilizer on soil profile carbon and nitrogen stocks and their fractions in wheat field. J. Environ. Manag. 368, 122140 (2024).

    Google Scholar 

  49. Eykelbosh, A. J., Johnson, M. S. & Couto, E. G. Biochar decreases dissolved organic carbon but not nitrate leaching in relation to vinasse application in a Brazilian sugarcane soil. J. Environ. Manag. 149, 9–16 (2015).

    Google Scholar 

  50. Hu, Q. Y. et al. The effects of straw returning and nitrogen fertilizer application on soil labile organic carbon fractions and carbon pool management index in a rice – wheat rotation system. Pedobiol. J. Soil Ecol. 101, 150913 (2023).

    Google Scholar 

  51. Jia, X. Y., Ma, H. Z., Yan, W. M., Shang, G. P. & Zhong, Y. Q. W. Effects of co-application of biochar and nitrogen fertilizer on soil profile carbon and nitrogen stocks and their fractions in wheat field. J. Environ. Manag. 368, 122140 (2024).

    Google Scholar 

  52. Li, H. Z. et al. Biochar’s dual role in greenhouse gas emissions: Nitrogen fertilization dependency and mitigation potential. Sci. Total Environ. 917, 170293 (2024).

    Google Scholar 

  53. Bamminger, C. et al. Short-term response of soil microorganisms to biochar addition in a temperate agroecosystem under soil warming. Agr. Ecosyst. Environ. 233, 308–317 (2016).

    Google Scholar 

  54. Pan, Y., Yin, Y. J., Sharma, P., Zhu, S. H. & Shang, J. Y. Field aging slows down biochar-mediated soil carbon dioxide emissions. J. Environ. Manag. 370, 122811 (2024).

    Google Scholar 

  55. Yan, T. T., Xue, J. H., Zhou, Z. D. & Wu, Y. B. Biochar-based fertilizer amendments improve the soil microbial community structure in a karst mountainous area. Sci. Total Environ. 794, 148757 (2021).

    Google Scholar 

  56. Chagas, J. K. M., Figueiredo, C. C. D. & Ramos, M. L. G. Biochar increases soil carbon pools: Evidence from a global meta-analysis. J. Environ. Manag. 305, 114403 (2022).

    Google Scholar 

  57. Tang, E., Liao, W. X. & Thomas, S. C. Optimizing biochar particle size for plant growth and mitigation of soil salinization. Agronomy 13, 1394 (2023).

    Google Scholar 

  58. Ayaz, M. et al. Biochar with inorganic nitrogen fertilizer reduces direct greenhouse gas emission flux from soil. Plants. 12, 1002 (2023).

    Google Scholar 

  59. Nan, Q., Fang, C. X., Cheng, L. Q., Hao, W. & Wu, W. X. Elevation of NO3-N from biochar amendment facilitates mitigating paddy CH4 emission stably over seven years. Environ. Pollut. 295, 118707 (2022).

    Google Scholar 

  60. Case, S. D. C., Mcnamara, N. P., Reay, D. S. & Whitaker, J. The effect of biochar addition on N2O and CO2 emissions from a sandy loam soil—The role of soil aeration. Soil Biol. Biochem. 51, 125–134 (2012).

    Google Scholar 

  61. Pi, X. X., Bin, Q. Z., Sun, F., Zhang, Z. K. & Gao, J. H. Catalytic activation preparation of nitrogen-doped hierarchical porous bio-char for efficient adsorption of dichloromethane and toluene. J. Anal. Appl. Pyrol. 156, 105150 (2021).

    Google Scholar 

  62. Niu, J. et al. Biomass-derived mesopore-dominant porous carbons with large specific surface area and high defect density as high performance electrode materials for Li-ion batteries and supercapacitors. Nano Energy 36, 322–330 (2017).

    Google Scholar 

  63. Ding, Y. et al. Recyclable regeneration of NiO/NaF catalyst: Hydrogen evolution via steam reforming of oxygen-containing volatile organic compounds. Energy Convers. Manag. 258, 115456 (2022).

    Google Scholar 

  64. Hu, X. J. et al. Changes in soil microbial functions involved in the carbon cycle response to conventional and biodegradable microplastics. Appl. Soil. Ecol. 195, 105269 (2024).

    Google Scholar 

  65. Chen, W. F., Meng, J., Han, X. R., Lan, Y. & Zhang, W. M. Past, present, and future of biochar. Biochar. 1, 75–87 (2019).

    Google Scholar 

  66. Philippot, L., Chenu, C., Kappler, A., Rillig, M. & Fierer, N. The interplay between microbial communities and soil properties. Nat. Rev. Microbiol. 22, 226–239 (2023).

    Google Scholar 

  67. Cao, X. C. et al. Optimum organic fertilization enhances rice productivity and ecological multifunctionality via regulating soil microbial diversity in a double rice cropping system. Field Crop Res. 318, 109569 (2024).

    Google Scholar 

  68. Kang, E. et al. Soil pH and nutrients shape the vertical distribution of microbial communities in an alpine wetland. Sci. Total Environ. 774, 145780 (2021).

    Google Scholar 

  69. Zhang, G. X. et al. The effects of different biochars on microbial quantity, microbial community shift, enzyme activity, and biodegradation of polycyclic aromatic hydrocarbons in soil. Geoderma 328, 100–108 (2018).

    Google Scholar 

  70. Zhang, L. Y., Jing, Y. M., Xiang, Y. Z., Zhang, R. D. & Lu, H. B. Responses of soil microbial community structure changes and activities to biochar addition: A meta-analysis. Sci. Total Environ. 643, 926–935 (2018).

    Google Scholar 

  71. Ji, G. X. et al. Response of soil microbes to Carex meyeriana meadow degeneration caused by overgrazing in inner Mongolia. Acta Oecologica. 117, 103860 (2022).

    Google Scholar 

  72. Zhang, W. B. et al. Recovery through proper grazing exclusion promotes the carbon cycle and increases carbon sequestration in semiarid steppe. Sci. Total Environ. 892, 164423 (2023).

    Google Scholar 

  73. Zhang, G. X., Liu, Y. Y., Zheng, S. L. & Hashisho, Z. Adsorption of volatile organic compounds onto natural porous minerals. J. Hazard. Mater. 364, 317–324 (2019).

    Google Scholar 

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Acknowledgements

This study was funded by three organizations: Fujian Provincial Natural Science Foundation Project (2025J011231) ,Special Project for Public Welfare Research Institutes (2025R1023004) and Fujian Provincial Key Guiding Project for Agriculture (2024N0057).

Funding

Collaborative Innovation Project, XTCXGC2021009

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Contributions

Hongmei Chen: Writing—original draft, Writing—review and editing, Methodology, Investigation, Formal analysis, Data Curation, Conceptualization. Xinyang Bian: Visualization, Validation, Formal analysis. Tingting Li: Methodology, Formal analysis, Data Curation. Xiaojie Qian: Supervision, Resources, Formal analysis, Data Curation. Lin Zhao: Investigation, Resources, Formal analysis. Xiaoling Chen: Validation, Formal analysis, Visualization. Zhu Liu:Resources, Supervision. Qinghua Li: Visualization, Project administration, Writing—Review & Editing, Funding acquisition. Fei Wang: Resources, Supervision, Funding acquisition. Zhgigang Yi: Conceptualization, Supervision, Methodology, Project administration.

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Qinghua Li.

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Chen, H., Bian, X., Li, T. et al. Synergistic effects of biochar and nitrogen fertilizer enhance soil carbon emissions and microbial diversity in acidic orchard soils.
Sci Rep (2026). https://doi.org/10.1038/s41598-025-07374-y

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  • DOI: https://doi.org/10.1038/s41598-025-07374-y

Keywords

  • Acidic soil
  • Biochar
  • Carbon emissions
  • Mineral-associated organic carbon

  • β-galactosidase


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