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    Forest-degradation thresholds shape tropical biodiversity

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    Serpents of the people: how a religious festival helps me to monitor snake behaviour

    “In this photo, I’m holding a snake known in Italy as a cervone (Elaphe quatuorlineata). It’s one of 189 that we’ve inspected so far in 2024 in Cocullo, a small town in the Abruzzo region of central Italy.In Cocullo, snakes feature in a spring ritual that dates back at least 2,000 years. At the start of April, snake catchers (known as serpari) capture dozens of snakes in preparation for what’s become Christianized as the procession of St Dominic of Sora. A statue of the saint — who lived in the region and, according to legend, cured many people from snake bites — is then adorned with live snakes and carried through the streets of Cocullo.A project to monitor the health and growth of the snakes has been in place for more than 15 years. I work with Gianpaolo Montinaro, who conceived the project in 2007, to supervise the monitoring on behalf of Italy’s environment ministry. My team, which includes two veterinarians at the University of Bari, acquires biological data and samples and places a microchip in each snake so that it can identified in future. At the end of the ritual, the snakes are released at the exact spot where they were captured.The information collected contributes to scientific publications and strategies on snake conservation — and, from this year, to a project at the Max Planck Institute of Animal Behavior to study animals’ responses to natural disasters. We’d never have been able to collect data on snake populations for so long had it not been for the Cocullo festival. Since 2010, we’ve gathered data on more than 1,500 snakes. This is a genuine example of citizen science, and is all the more impressive given that snakes are widely feared.Outside the snake-festival season, I deal with invasive exotic species, biodiversity-protection policies and endangered species.” More

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    Harrowing trends: how endangered-species researchers find hope in the dark

    Luis Coloma grew up in Guaranda, Ecuador, a small city in the Andes nestled in a high valley near the Chimborazo volcano. “It was a paradise,” he says. “When I was a kid, the frogs were so abundant it was impossible to ignore them.” Beyond seeing various species living together along the riverbanks, he was elated by their boisterous calls.In secondary school, Coloma paged through field guides and zoology encyclopedias, eager to find frog species that matched the stunning array of colours, shapes and sizes of the ones in his own back garden — but his searches always came up short. “Looking at these animals that didn’t fit the descriptions was fantastic. It was a world of discovery.”Inspired by his childhood obsession with amphibians, Coloma moved to the United States in 1988 to pursue a PhD in systematics and ecology at the University of Kansas in Lawrence. But by the time he returned to Ecuador in the late 1990s, the frogs in the mountains where he grew up had already begun to disappear. “It became clear that there were apocalyptic extinctions happening,” he says. “That was the beginning of my conservation work.”
    Want to make a difference? Try working at an environmental non-profit organization
    In 2021, Coloma co-authored a paper in PLoS ONE stating that 57% of the amphibian species in Ecuador are endangered or vulnerable because of climate change, habitat loss and disease, particularly that caused by Batrachochytrium dendrobatidis, a chytrid fungus1. But declines in biodiversity extend beyond amphibians. Some scientists argue that Earth is entering a sixth mass-extinction event, the first to be caused entirely by the activities of one species — humans. According to the wildlife charity WWF’s Living Planet Report 2022, since 1970 there has been a 69% decline in the average abundance of nearly 32,000 species populations, with the biggest reductions seen in Latin America and the Caribbean. “It’s heartbreaking,” says Coloma, who is now director of the Jambatu Center for Amphibian Research and Conservation in Quito.Despite the harrowing trends, endangered-species biologists such as Coloma are striving to protect Earth’s biodiversity. But their work with species in danger of extinction brings special challenges — both in handling the organisms and in approaching the daunting odds of success. At times, these efforts can feel like a quixotic battle. Here, endangered-species biologists describe their best strategies for the high-stakes research and how they find reasons for hope.The weight of a wordOne of the major challenges in protecting threatened species is getting them listed as endangered in the first place. Juan Manuel Guayasamín, a biologist at the San Francisco University of Quito, has described 64 amphibian species and 15 reptile species. In 2004, he published a paper describing a new species, the Mache glass frog (Cochranella mache)2. On the basis of his data, he proposed that it should be listed as endangered in the International Union for Conservation of Nature (IUCN) Red List of Threatened Species, a comprehensive source that describes the extinction risk for animals, plants and fungi around the world.To get a species listed as endangered, researchers must provide adequate data on population sizes, geographic range and extinction probability, which are challenging metrics to estimate when individuals are hard to find and resources are limited. If scientists cannot estimate population size, Guayasamín recommends evaluating whether the species has a small distribution or a reduced or fragmented habitat. “We have more than 600 species of amphibians in Ecuador. It’s impossible to have a monitoring process for every single species — we don’t have enough people or the funds,” says Guayasamín.But once a species is listed, it can open opportunities for funding and generate broad support. “It’s absolutely worth having species listed as endangered because that’s how you get the public on board with conservation,” says Danya Weber, a conservation biologist and artist in Hilo, Hawaii.

    Juan Manuel Guayasamín demonstrates how to handle frogs at a workshop in Colombia.Credit: Pedro Peloso

    Biologists often look to national legislation, alongside the IUCN Red List, to protect at-risk species. In 2008, Ecuador became the first country to give nature constitutional rights. It’s still the only country to have such legislation. “It is very unique,” Guayasamín says. “If you can prove that an area at risk has endemic and endangered species, the constitution gives you a lot of strength to take actions to protect it,” such as removing invasive organisms and protecting habitat. Many of the animals described by Guayasamín were key to protecting endangered ecosystems, mostly in the Andes and Chocó ecoregions, under this law.Try to do no harmConservation researchers collect field data on abundance, population trends and threats. They also capture individuals as part of breeding and reintroduction programmes. But their actions can harm not only the species in question, but also the ecosystem. As a result, endangered-species biologists often grapple with the ethical trade-offs between the impacts of interference and the potential consequences of inaction, namely extinction.“My biggest comfort comes when I start my day,” says Dechen Dorji, who grew up in Bhutan and now directs the WWF’s conservation efforts in Asia from his office in Washington DC. “I’m a Buddhist, and one of our common prayers is a simple verse — may all sentient beings be free from all forms of suffering.”During his career at the WWF, Dorji has fought to protect Asian elephants (Elephas maximus), tigers (Panthera tigris) and snow leopards (Panthera uncia), as well as lesser-known species such as the musk deer (Moschus spp.), white-bellied heron (Ardea insignis) and ruddy shelduck (Tadorna ferruginea). Although a better understanding of these animals can improve conservation outcomes, it’s crucial to do research in a way that limits negative impacts, he says. For instance, Dorji and his team have trapped tigers to fit them with GPS tracking collars to study their ecology and movements, but the trapping process can injure the tigers’ limbs. “Humane treatment of tigers, careful planning and continuous monitoring are essential to minimize the risks of injury,” Dorji says.

    Conservation biologist Danya Weber helps connect people to species through her artwork.Credit: Mahina Choy

    To reduce their impacts, Dorji and his colleagues also sample environmental DNA, genetic material shed by organisms that is found in soil, water, faeces and other sources, to non-invasively track the presence of different species in a habitat. “It’s cost effective, accurate and we can detect a whole range of species without causing any harm,” he says.In the Pacific Ocean, Jordan Lerma, a field biologist at Cascadia Research Collective, who is based in Hilo, uses another hands-off approach. As of 2021, the endangered and declining Main Hawaiian Islands population of false killer whales (Pseudorca crassidens) has about 138 individuals. Cascadia researchers want to study their habitat use, abundance, growth, movement patterns and threats. “They are really difficult to find, and once we find them, they don’t want to be around us,” says Lerma. In 2014, to lessen the impacts of boat-based research, Lerma started flying drones over whales and dolphins in Hawaiian waters. Although drones can’t entirely replace hands-on methods, using minimally invasive sampling techniques when possible reduces the number of direct human interactions with animals and provides effective ways to collect biological data.For other researchers, the downsides of studying endangered species in the wild drive them to find alternative ways to protect the animals. Weber started her scientific career in 2016 as a conservation technician at the Kaua‘i Forest Bird Recovery Project, a non-profit organization in Hanapepe, Hawaii, that works to conserve three federally endangered bird species, including the songbirds ‘akikiki (Oreomystis bairdi) and ‘akeke‘e (Loxops caeruleirostris). For the next two years, Weber wandered the forests in search of bird nests to monitor populations and collect eggs for captive breeding. “In Hawaii, we don’t have any native land mammals that walk around in the forest trampling vegetation,” she says. The only large creatures that do so are humans. “When we’re doing conservation work, we’re creating all these little routes for erosion.”
    How we packed off the giant pandas from the Smithsonian’s National Zoo
    Other protection efforts that involve the use of herbicides to remove invasive plant species can negatively affect native plants and soil microbes, Weber adds. “It’s easy to get laser-focused on the particular endangered species that you’re working with and not take into consideration our impacts on everything else in the area.”In 2017, Weber founded Laulima, a fashion and art store that seeks to connect people with and preserve Hawaii’s native biodiversity through merchandise, including apparel, accessories, stickers and mugs designed by Weber and other artists. “With my artwork, I help people build relationships with these plants and animals they share a home with, since many people will never get the opportunity to visit pristine native forests,” she says. Every product comes with packaging that educates the buyer about the species in the design.“The literal translation of laulima is ‘many hands’,” Weber says. “To protect native species, we need all hands on deck.” Many of Weber’s watercolours and digital illustrations are inspired by species that have political or social relevance. For example, Hawaii’s governor designated 2023 as the year of the kāhuli, so her artwork highlighted these native Hawaiian snails (Achatinella spp.). Weber also raises awareness about endangered Hawaiian monk seals (Monachus schauinslandi), some of which have been killed by humans who mistakenly think the seals are not native and are competing with local fishers for food.For Weber, pursuing a career in conservation art and outreach has been worthwhile. “When I was in the field, it felt like an uphill battle. It’s very hard to see the fruits of your labour. Whereas in outreach, you see people’s mindsets shift. I’ve noticed a lot more teenagers and university-age students getting into careers in conservation.”Banding togetherPerhaps the biggest challenge of endangered-species work is facing the fact that they might soon disappear. “The more you know, the sadder it gets, unfortunately,” says Lerma. And yet, Lerma and others maintain glimmers of hope and continue fighting for protections. For Weber, cracking sarcastic jokes with colleagues about being underfunded and battling invasive species can help to ease the heaviness. Guayasamín leans into his strong sense of moral responsibility: “Many species are in danger because of human activity, so it’s our responsibility to respect nature and address our impacts.”Building collaborations that extend beyond the scientific realm is another way for scientists to find inspiration and camaraderie. In April in Paro, Bhutan, Dorji attended the Sustainable Finance for Tiger Landscapes Conference, which kick-started an effort aiming to raise US$1 billion by 2034 to spend on the conservation of tigers and the landscapes where they live. More than 200 people from around the world attended, including private donors, government leaders and members of financial institutions. “To see that partnership, commitment and sense of urgency was hugely exciting,” says Dorji. “Those kinds of things keep us going.”

    Dorchen Dorji, who grew up in the Himalayan mountains in Bhutan and now oversees the WWF’s conservation efforts in Asia, says collaborating with local community members is essential.Credit: Dechen Dorji/WWF

    In January 2023, Lerma founded Nēnē Research and Conservation, an organization that partners with government agencies and community groups to protect the nēnē (Branta sandvicensis), a goose species that is endemic to Hawaii. Nēnē were federally down-listed from endangered to threatened in 2019, thanks to successful conservation efforts that brought the population from 30 individuals in the 1950s up to more than 3,800 in 2022. But the species is still listed as endangered at the state level.Over the past year, Lerma and his team have launched a database in which community members record nēnē sightings, injuries and deaths. Nēnē tend to gather in areas frequented by people, such as golf courses and parks, so they’re easy to find.Lerma’s team used this database, which now has 1,055 contributors and 11,723 sightings, to identify a stretch of road on the Big Island where many nēnē were hit by cars. “We presented that data to the county and got speed tables and raised crosswalks installed. We’re protecting the community and the species. No nēnē have been killed since.”Dorji also emphasizes the importance of collaborating with local and Indigenous communities whose efforts and lands play an essential part in conservation, he says. “We often tell conservation stories from a very utilitarian perspective of how beneficial other species are to humans, but many cultures have their own stories that we need to listen to and respect.”
    I took my case to Nepal’s highest court to improve conservation
    In many cases, community members uniquely understand the ecology and biology of local flora and fauna. At the Jambatu Center for Amphibian Research and Conservation, Coloma and his colleagues maintain colonies of about 2,600 individuals of 76 amphibian species, including 30 that are close to extinction. He attributes the success of these programmes to two staff members who were born in the jungles of Ecuador. “They are not PhDs. They are people that love these animals and have a specialized understanding of their needs,” he says.In 2016, Coloma heard about the presence of a jambato toad (Atelopus ignescens) from a priest in Angamarca, Ecuador. “The jambato were part of the daily life of the Indigenous people here; they used them as a medicine, and they were part of kids’ games in the Andes,” says Coloma. But the once-abundant species hadn’t been seen since March 1988 and was declared extinct by the IUCN in 2004.When the priest sent Coloma a photo of the toad, which was found by a ten-year-old boy on the child’s family’s farm, Coloma was stunned. “I couldn’t believe it. I lost the faith that I would see these frogs again. It was a dream,” he says. The species was re-listed as critically endangered in 2016. Now, Coloma’s organization is searching for more jambato toads in the wild and breeding them in captivity, with the hopes of reintroducing them in future. “We need to fight for our dreams.” More

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    Why I work to revive the Tasmanian tiger

    “In this photo I’m checking my team’s store of stem cells of the fat-tailed dunnart (Sminthopsis crassicaudata), a mouse-like marsupial that is the closest living relative of the thylacine, or Tasmanian tiger (Thylacinus cynocephalus). This mammal was an Australian apex predator, the size of a big dog. It once thrived throughout the continent but went extinct — first on the Australian mainland, and later in Tasmania, where it was hunted for hides and to reduce sheep attacks.The last thylacine, ‘Benjamin’, died in captivity in 1936, on 7 September — a date that is now marked as World Extinction Day.Here at the TIGRR laboratory, our main project is to bring back the thylacine by using gene-editing technology with cells from animals such as the fat-tailed dunnart. To achieve this, we’re trying to produce a complete genome for the species. We sequence DNA from historic specimens, using cells from young thylacines that had been kept for more than 100 years in alcohol preservatives. We compare that DNA with the dunnart genome and work out the gene edits that we would have to make to the dunnart cells to engineer a thylacine.We’re also developing cloning and in vitro fertilization (IVF) techniques for use in marsupials (such techniques are already well established for other mammals).When we restore the genome and thus create a complete thylacine cell, we’ll be able to use cloning, alongside IVF, in dunnarts to create living animals. My motivation is not to create an animal that goes into a zoo. We want to put the thylacine back into the environment, where it can help to address imbalances in the ecosystem.People say we are playing God with our work. But we played God when we wiped out the thylacine. My research is looking at ways to heal lost biodiversity.” More

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    These frog ‘saunas’ could help endangered species fight off a deadly fungus

    Download the Nature Podcast 3 July 2024 In this episode:00:47 Searching for dark matter in black holesResearchers have been scanning the skies looking for black holes that formed at the very beginning of the Universe — one place where elusive and mysterious dark matter is thought to be located. If these black holes did contain dark matter, they would be especially massive and so researchers would be able to see the bending of light as they pass in front of stars. Such events would be rare, so to find them researchers trawled through a decades-long dataset. However, despite the large number of observations, the researchers didn’t find many examples of these events and none that were long enough to show signs of much dark matter. So, the hunt for enigmatic material goes on.Research Article: Mróz et al.09:42 Research HighlightsHow some comb jellies survive the crushing ocean depths, and how giving cash to mothers in low-income households can boost time and money spent on children.Research Highlight: Deep-sea creatures survive crushing pressures with just the right fatsResearch Highlight: Families given cash with no strings spend more money on kids12:39 A simple, solution to tackle a deadly frog diseaseA simple ‘sauna’ built of bricks and a supermarket-bought greenhouse, can help frogs rid themselves of a devastating fungal disease, new research has shown. Although options to prevent or treat infection are limited, the fungus that causes the disease chytridiomycosis has an achilles heel: it can’t survive at warm temperatures. A team in Australia used this knowledge to their advantage to develop saunas where frogs can warm themselves to clear an infection. Frogs who spent time in these hot environments were able to shake the fungus, and gained some immunity to subsequent infections. Although this research involved only one type of frog, it offers some hope in tackling a deadly disease that has driven multiple species to extinction.Research Article: Waddle et al.News and Views: Mini saunas save endangered frogs from fungal disease20:06 Briefing ChatThis time, we discuss what the upcoming UK election could mean for science, and the return of rock samples from the Moon’s far side.Nature News: UK general election: five reasons it matters for scienceNature News: First ever rocks from the Moon’s far side have landed on EarthSubscribe to Nature Briefing, an unmissable daily round-up of science news, opinion and analysis free in your inbox every weekday.Never miss an episode. Subscribe to the Nature Podcast on Apple Podcasts, Spotify, YouTube Music or your favourite podcast app. An RSS feed for the Nature Podcast is available too. More

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    Mini saunas save endangered frogs from fungal disease

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    Galapagos battles goats and tourists in 1974

    We aim to foster cutting-edge scientific and technological advancements in the field of molecular tissue biology at the single-cell level.
    Guangzhou, Guangdong, China
    Guangzhou Institutes of Biomedicine and Health(GIBH), Chinese Academy of Sciences More

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    You’re not imagining it: extreme wildfires are now more common

    The frequency at which extreme fires occur around the world has more than doubled during the past two decades, according to an analysis of satellite data1. The trend is driven by the exponential growth of extreme fires across vast portions of Canada, the western United States and Russia, researchers say.The results provide the first solid evidence to support a nagging suspicion that many scientists and others have had as they watch a seemingly endless series of cataclysmic infernos scorch ecosystems and communities: wildfires have increased somehow, and climate change is almost certainly a factor.“It’s the extreme events that we care about the most, and those are the ones that are increasing quite significantly,” says lead author Calum Cunningham, an ecologist at the University of Tasmania in Hobart, Australia. “Surprisingly, this has never been shown at a global scale.”Heating upResearchers have already documented an increase in wildfire activity across the western forests of the United States2, but they have had a harder time pinning down a clear global trend. One confounding factor is that the amount of land burned annually has been declining, in part owing to a steady reduction in fire activity in African grasslands and savannahs.For the current study, published in Nature Ecology and Evolution on 24 June1, Cunningham and his colleagues scoured global satellite data for fire activity. They used infrared records to measure the energy intensity of nearly 31 million daily fire events over two decades, focusing on the most extreme ones — roughly 2,900 events. The researchers calculated that there was a 2.2-fold increase in the frequency of extreme events globally in 2003–23, and a 2.3-fold boost in the average intensity of the top 20 most intense fires each year (see ‘Rising fire intensity’).

    Source: Ref. 1

    The forests most affected by extreme fires were those in places such as western North America that contain coniferous trees including spruce and pine; they showed an 11.1-fold increase in the number of fires over the study period. Boreal forests at high latitudes in countries such as Canada, the United States and Russia were also significantly affected, showing a 7.3-fold increase in fires.The results aren’t necessarily surprising, says Park Williams, a hydroclimatologist at the University of California, Los Angeles. But they are the first compelling evidence that “extreme fires have grown more extreme”, he adds.Although the study doesn’t directly connect the fire trend to global warming, Cunningham says “there’s almost certainly a significant signal of climate change”. Research has shown3 that rising temperatures are drying out ecosystems — such as coniferous forests — that are naturally prone to fire. This provides fuel that can boost the fires’ size and longevity. The latest study also found that the energy intensity of the fires increased faster during the night-time over the past two decades than during the daytime, which aligns with evidence4 that rising night-time temperatures are contributing to fire risk.The researchers identified extreme fires occurring in several other biomes across the globe, including those in Australia, which experienced unprecedented wildfires in 2019 and 2020, and the Mediterranean. Although they didn’t see clear trends in these regions, Cunningham says that it might be only a matter of time before they emerge as temperatures continue to rise. More