Brunetti, R. et al. Morphological evidence that the molecularly determined Ciona intestinalis type A and type B are different species: Ciona robusta and Ciona intestinalis. J. Zool. Syst. Evol. Res. 53, 186–193. https://doi.org/10.1111/jzs.12101 (2015).
Lambert, C. C. Historical introduction, overview, and reproductive biology of the protochordates. Can. J. Zool. 83, 1–7. https://doi.org/10.1139/z04-160 (2005).
Dybern, B. I. The distribution and salinity tolerance of Ciona intestinalis (L.) F. typica with special reference to the waters around Southern Scandinavia. Ophelia 4, 207–226. https://doi.org/10.1080/00785326.1967.10409621 (1967).
Lambert, C. C. & Lambert, G. Persistence and differential distribution of nonindigenous ascidians in harbors of the Southern California Bight. Mar. Ecol. Progr. Ser. https://doi.org/10.3354/meps259145 (2003).
Lambert, C. C. & Lambert, G. Non-indigenous ascidians in southern California harbors and marinas. Mar. Biol. 130, 675–688. https://doi.org/10.1007/s002270050289 (1998).
Lundälv, T. & Christie, H. Comparative trends and ecological patterns of rocky subtidal communities in the Swedish and Norwegian Skagerrak area. Hydrobiologia 142, 71–80. https://doi.org/10.1007/BF00026748 (1987).
Hoshino, Z. & Nishikawa, T. Taxonomic studies of Ciona intestinalis (L.) and its allies. Seto Mar. Biol. Lab. Pubbl. 30, 61–79 (1985).
Mazzola, A. & Riggio, S. Fouling of Palermo harbour. 2nd contribution. Mem. Biol. Mar. Oceanogr. 6, 41–43 (1977).
Havenhand, J. N. & Svane, I. Roles of hydrodynamics and larval behaviour in determining spatial aggregation in the tunicate Ciona intestinalis. Mar. Ecol. Progr. Ser. 68, 271–276. https://doi.org/10.3354/meps068271 (1991).
Koechlin, N. Settlement of epifauna of Spirographis spallanzani, Sycon ciliatum and Ciona intestinalis in the harbor of Lezardrieux. Cah. Biol. Mar. 18, 325–337 (1977).
Zupo, V., Buia, M. C., Gambi, M. C., Lorenti, M. & Procaccini, G. Temporal variations in the spatial distribution of shoot density in a Posidonia oceanica meadow and patterns of genetic diversity. Mar. Ecol. 27, 328–338. https://doi.org/10.1111/j.1439-0485.2006.00133.x (2006).
Keough, M. J. Patterns of recruitment of sessile invertebrates in two subtidal habitats. J. Exp. Mar. Biol. Ecol. 66, 213–245. https://doi.org/10.1016/0022-0981(83)90162-4 (1983).
Cayer, D., MacNeil, M. & Bagnall, A. G. Tunicate fouling in Nova Scotia aquaculture: a new development. J. Shellfish Res. 18, 327 (1999).
de Oliveira Marins, F., da Silva Oliveira, C., Maciel, N. M. V. & Skinner, L. F. Reinclusion of Ciona intestinalis (Ascidiacea: Cionidae) in Brazil—a methodological view. Mar. Biodivers. Rec. https://doi.org/10.1017/S175526720900116X (2009).
Svane, I. & Lundälv, T. Reproductive patterns and population dynamics of Ascidia mentula O.F. Müller on the Swedish west coast. J. Exp. Mar. Biol. Ecol. 50, 163–182. https://doi.org/10.1016/0022-0981(81)90048-4 (1981).
Svane, I. & Lundalv, T. Persistence stability in ascidian populations: long-term population dynamics and reproductive pattern of Pyura tessellata (forbes) in gullmarfjorden on the swedish west coast. Sarsia 67, 249–257. https://doi.org/10.1016/0022-0981(81)90048-4 (1982).
Svane, I. Ascidian reproductive patterns related to long-term population dynamics. Sarsia 68, 249–255. https://doi.org/10.1080/00364827.1982.10421339 (1983).
Lambert, G. The general ecology and growth of a solitary ascidian, Corella willmeriana. Biol. Bull. 135, 296–307. https://doi.org/10.2307/1539783 (1968).
Goodbody, I. The biology of Ascidia nigra (Savigny). 11. The development and survival of young ascidians. Biol. Bull. 124, 31–44. https://doi.org/10.2307/1539566 (1963).
Goodbody, I. The Biology of Ascidia nigra (Savigny). I. Survival and mortality in an adult population. Biol. Bull. 122, 40–51. https://doi.org/10.2307/1539320 (1962).
Sato, A., Satoh, N. & Bishop, J. D. D. Field identification of ‘types’ A and B of the ascidian Ciona intestinalis in a region of sympatry. Mar. Biol. 159, 1611–1619. https://doi.org/10.1007/s00227-012-1898-5 (2012).
Harada, Y. et al. Mechanism of self-sterility in a hermaphroditic chordate. Science 320, 548–550. https://doi.org/10.1126/science.1152488 (2008).
Sawada, H., Morita, M. & Iwano, M. Self/non-self recognition mechanisms in sexual reproduction: New insight into the self-incompatibility system shared by flowering plants and hermaphroditic animals. Biochem. Biophys. Res. Commun. 450, 1142–1148. https://doi.org/10.1016/j.bbrc.2014.05.099 (2014).
Dehal, P. et al. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins. Science 298, 2157–2167. https://doi.org/10.1126/science.1080049 (2002).
Sasaki, A., Miyamoto, Y., Satou, Y., Satoh, N. & Ogasawara, M. Novel endostyle-specific genes in the ascidian Ciona intestinalis. Zool. Sci. 20, 1025–1030. https://doi.org/10.2108/zsj.20.1025 (2003).
Joly, J. S. et al. Culture of Ciona intestinalis in closed systems. Dev. Dyn. 236, 1832–1840. https://doi.org/10.1002/dvdy.21124 (2007).
Gallo, A. & Tosti, E. Adverse effect of antifouling compounds on the reproductive mechanisms of the ascidian Ciona intestinalis. Mar. Drugs 11, 3554–3568. https://doi.org/10.3390/md11093554 (2013).
Corbo, J. C., Di Gregorio, A. & Levine, M. The Ascidian as a model organism in developmental and evolutionary biology. Cell 106, 535–538. https://doi.org/10.1016/s0092-8674(01)00481-0 (2001).
Stolfi, A. & Christiaen, L. Genetic and genomic toolbox of the chordate Ciona intestinalis. Genetics 192(1), 55–66. https://doi.org/10.1534/genetics.112.140590 (2012).
Dahlberg, C. et al. Refining the Ciona intestinalis model of central nervous system regeneration. PLoS ONE 4(2), e4458. https://doi.org/10.1371/journal.pone.0004458 (2009).
Bollner, T., Beesley, P. W. & Thorndyke, M. C. Distribution of GABA-like immunoreactivity during post-metamorphic development and regeneration of the central nervous system in the ascidian Ciona intestinalis. Cell Tissue Res. 272, 553–561. https://doi.org/10.1007/BF00318562 (1993).
Ando, R., Hama, H., Yamamoto-Hino, M., Mizuno, H. & Miyawaki, A. An optical marker based on the UV-induced green-to-red photoconversion of a fluorescent protein. Proc. Natl. Acad. Sci. USA 99, 12651–12656. https://doi.org/10.1073/pnas.202320599 (2002).
Carver, C. E., Mallet, A. L. & Vercaemer, B. Biological synopsis of the solitary tunicate Ciona intestinalis. Can. Man. Rep. Fish. Aquat. Sci. 2746 (2006).
Fiala-Médioni, A. Filter-feeding ethology of benthic invertebrates (ascidians). IV. Pumping rate, filtration rate, filtration efficiency. Mar. Biol. 48, 243–249. https://doi.org/10.1007/BF00397151 (1978).
Hoxha, T. et al. Comparative feeding rates of native and invasive ascidians. Mar. Pollut. Bull. 135, 1067–1071. https://doi.org/10.1016/j.marpolbul.2018.08.039 (2018).
Petersen, J. K., Mayer, S. & Knudsen, M. Å. Beat frequency of cilia in the branchial basket of the ascidian Ciona intestinalis in relation to temperature and algal cell concentration. Mar. Biol. 133, 185–192. https://doi.org/10.1007/s002270050457 (1999).
Millar, R. H. The biology of ascidians. Adv. Mar. Biol. 9, 1–100 (1971).
Thomas, N. W. Mucus-secreting cells from the alimentary canal of Ciona intestinalis. J. Mar. Biol. Assoc. U. K. 50, 429–438. https://doi.org/10.1017/S0025315400004628 (1970).
Flood, P. R. & Fiala-Medioni, A. Ultrastructure and histochemistry of the food trapping mucous film in benthic filter-feeders (Ascidians). Acta Zool. 62, 53–65. https://doi.org/10.1111/j.1463-6395.1981.tb00616.x (1981).
Randløv, A. & Riisgard, H. U. Efficiency of particle retention and filtration rate in four species of ascidians. Mar. Ecol. Progr. Ser. 11, 89–103 (1979).
Petersen, J. K. & Riisgard, H. U. Filtration capacity of the ascidian Ciona intestinalis and its grazing impact in a shallow fjord. Mar. Ecol. Prog. Ser. 88, 9–17 (1992).
Lumare, F., Di Muro, P., Tenderini, L. & Zupo, V. Experimental intensive culture of Penaeus monodon in the cold-temperate climate of the North-East coast of Italy (a fishery ‘valle’ of the River Po Delta). Aquaculture 113, 231–241. https://doi.org/10.1016/0044-8486(93)90476-F (1993).
Mutalipassi, M., Di Natale, M., Mazzella, V. & Zupo, V. Automated culture of aquatic model organisms: shrimp larvae husbandry for the needs of research and aquaculture. Animal 12, 155–163. https://doi.org/10.1017/S1751731117000908 (2018).
Armsworthy, S. L., MacDonald, B. A. & Ward, J. E. Feeding activity, absorption efficiency and suspension feeding processes in the ascidian, Halocynthia pyriformis (Stolidobranchia: Ascidiacea): responses to variations in diet quantity and quality. J. Exp. Mar. Biol. Ecol. 260, 41–69. https://doi.org/10.1016/S0022-0981(01)00238-6 (2001).
Coughlan, J. The estimation of filtering rate from the clearance of suspensions. Mar. Biol. 2, 356–358. https://doi.org/10.1007/BF00355716 (1969).
Pascoe, P. L., Parry, H. E. & Hawkins, A. J. S. Dynamic filter-feeding responses in fouling organisms. Aquat. Biol. 1, 177–185. https://doi.org/10.3354/ab00022 (2007).
Petersen, J. K. Ascidian suspension feeding. J. Exp. Mar. Biol. Ecol. 342, 127–137. https://doi.org/10.1016/j.jembe.2006.10.023 (2007).
Robbins, I. J. The effects of body size, temperature, and suspension density on the filtration and ingestion of inorganic particulate suspensions by ascidians. J. Exp. Mar. Biol. Ecol. 70, 65–78. https://doi.org/10.1016/0022-0981(83)90149-1 (1983).
Varrella, S. et al. Toxic diatom aldehydes affect defence gene networks in sea urchins. PLoS ONE 11, e0149734. https://doi.org/10.1371/journal.pone.0149734 (2016).
Varrella, S. et al. First morphological and molecular evidence of the negative impact of diatom-derived hydroxyacids on the sea urchin Paracentrotus lividus. Toxicol. Sci. 151, 419–433. https://doi.org/10.1093/toxsci/kfw053 (2016).
Jacobi, Y., Yahel, G. & Shenkar, N. Efficient filtration of micron and submicron particles by ascidians from oligotrophic waters. Limnol. Oceanogr. 63, S267–S279. https://doi.org/10.1002/lno.10736 (2018).
Robbins, I. J. The regulation of ingestion rate, at high suspended particulate concentrations, by some phleobranchiate ascidians. J. Exp. Mar. Biol. Ecol. 82, 1–10. https://doi.org/10.1016/0022-0981(84)90135-7 (1984).
Ogasawara, M. et al. Gene expression profiles in young adult Ciona intestinalis. Dev. Genes Evol. 212, 173–185. https://doi.org/10.1007/s00427-002-0230-7 (2002).
Hendrickson, C. et al. Culture of adult ascidians and ascidian genetics. Methods Cell Biol. 143–170, 2004. https://doi.org/10.1016/S0091-679X(04)74007-8 (2004).
Petersen, S. Feeding response to fish feed diets in Ciona intestinalis: implications for IMTA. IMTA. MSc thesis. University of Bergen (2016).
Knuckey, R. M., Brown, M. R., Robert, R. & Frampton, D. M. F. Production of microalgal concentrates by flocculation and their assessment as aquaculture feeds. Aquacult. Eng. 35, 300–313. https://doi.org/10.1016/j.aquaeng.2006.04.001 (2006).
Raniello, R., Iannicelli, M. M., Nappo, M., Avila, C. & Zupo, V. Production of Cocconeis neothumensis (Bacillariophyceae) biomass in batch cultures and bioreactors for biotechnological applications: light and nutrient requirements. J. Appl. Phycol. 19, 383–391. https://doi.org/10.1007/s10811-006-9145-4 (2007).
Nappo, M. et al. Metabolite profiling of the benthic diatom Cocconeis scutellum by GC-MS. J. Appl. Phycol. 21, 295–306. https://doi.org/10.1007/s10811-008-9367-8 (2009).
Ruocco, N. et al. Diatom-derived oxylipins induce cell death in sea urchin embryos activating caspase-8 and caspase 3/7. Aquat. Toxicol. 176, 128–140 (2016).
Ruocco, N., Costantini, M. & Santella, L. New insights into negative effects of lithium on sea urchin Paracentrotus lividus embryos. Sci. Rep. 6, 1–12. https://doi.org/10.1038/srep32157 (2016).
Sigsgaard, S. J., Petersen, J. K. & Iversen, J. J. L. Relationship between specific dynamic action and food quality in the solitary ascidian Ciona intestinalis. Mar. Biol. 143, 1143–1149. https://doi.org/10.1007/s00227-003-1164-y (2003).
Liu, L. et al. Ciona intestinalis as an emerging model organism: its regeneration under controlled conditions and methodology for egg dechorionation. J. Zhejiang Univ. Sci. B 7, 467–474. https://doi.org/10.1631/jzus.2006.B0467 (2006).
Costantini, S. et al. Evaluating the effects of an organic extract from the mediterranean sponge Geodia cydonium on human breast cancer cell lines. Int. J. Mol. Sci. https://doi.org/10.3390/ijms18102112 (2017).
Costantini, S. et al. Anti-inflammatory effects of a methanol extract from the marine sponge Geodia cydonium on the human breast cancer MCF-7 cell line. Mediators Inflamm. https://doi.org/10.1155/2015/204975 (2015).
Ruocco, N. et al. High-quality RNA extraction from the sea urchin Paracentrotus lividus embryos. PLoS ONE 12, e0172171. https://doi.org/10.1371/journal.pone.0172171 (2017).
Fujikawa, T., Munakata, T., Kondo, S. I., Satoh, N. & Wada, S. Stress response in the ascidian Ciona intestinalis: transcriptional profiling of genes for the heat shock protein 70 chaperone system under heat stress and endoplasmic reticulum stress. Cell Stress Chaperones 15, 193–204. https://doi.org/10.1007/s12192-009-0133-x (2010).
Pfaffl, M. W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29, 45e–445. https://doi.org/10.1093/nar/29.9.e45 (2001).
Pfaffl, M. W. Relative expression software tool (REST(C)) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 30, 36e–336. https://doi.org/10.1093/nar/30.9.e36 (2002).
Ginzburg, L. R. The theory of population dynamics: I. Back to first principles. J. Theor. Biol. 122, 385–399. https://doi.org/10.1016/S0022-5193(86)80180-1 (1986).
Turchin, P. Does population ecology have general laws?. Oikos 94, 17–26. https://doi.org/10.1034/j.1600-0706.2001.11310.x (2001).
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