Takahashi, S., Uenosono, S. & Ono, S. Short- and long-term effects of rice straw application on nitrogen uptake by crops and nitrogen mineralization under flooded and upland conditions. Plant Soil 251, 291–301 (2003).
Shan, Y., Cai, Z., Han, Y., Johnson, S. E. & Buresh, R. J. Organic acid accumulation under flooded soil conditions in relation to the incorporation of wheat and rice straws with different C: N ratios. Soil Sci. Plant Nutr. 54, 46–56 (2008).
Lenka, N. K. & Lal, R. Soil aggregation and greenhouse gas flux after 15 years of wheat straw and fertilizer management in a no-till system. Soil Till. Res. 126, 78–89 (2013).
Said-Pullicino, D. et al. Nitrogen immobilization in paddy soils as affected by redox conditions and rice straw incorporation. Geoderma. 228, 44–53 (2014).
Su, P., Brookes, P. C., He, Y., Wu, J. J. & Xu, J. M. An evaluation of a microbial inoculums in promoting organic C decomposition in a paddy soil following straw incorporation. J. Soil Sediment 6, 1–11 (2016).
Lovell, R. D., Jarvis, S. C. & Bardgett, R. D. Soil microbial and activity in long-term grassland: effects of management change. Soil Biol. Biochem. 27, 969–975 (1995).
Ocio, J. A., Brookes, P. C. & Jenkinson, D. S. Field incorporation of straw and its effects on soil microbial biomass and soil inorganic N. Soil Biol. Biochem. 23, 171–176 (1991).
Shindo, H. & Nishio, T. Immobilization and remineralization of N following addition of wheat straw into soil: determination of gross N transformation rates by 15N- ammonium isotope dilution technique. Soil Biol. Biochem. 37, 425–432 (2005).
Tardy, V. et al. Land use history shifts in situ fungal and bacterial successions following wheat straw input into the soil. Plos One. 10, 1–17 (2015).
Govaerts, B. et al. Infiltration, soil moisture, root rot and nematode populations after 12 years of different tillage, residue and crop rotation managements. Soil Till. Res. 94, 209–219 (2007).
Qi, Y. Z., Zhen, W. C. & Li, H. Y. Allelopathy of decomposed maize straw products on three soil-born disease of wheat and the analysis by GC-MS. J. Integr. Agr. 14, 88–97 (2015).
Ding, W. et al. Effect of long-term compost and inorganic fertilizer application on background N2O and fertilizer-induced N2O emissions from an intensively cultivated soil. Sci. Total Environ. 465, 115–124 (2013).
Meng, F., Lal, R., Kuang, X., Ding, G. W. & Wu, W. L. Soil organic carbon dynamics within density and particle-size fractions of aquic cambisols under different land use in northern China. Geoderma. Regional 1, 1–9 (2014).
Bastian, F., Bouziri, L., Nicolardot, B. & Ranjard, L. Impact of wheat straw decomposition on successional patterns of soil microbial community structure. Soil Biol. Biochem. 41, 262–275 (2009).
Arias, M. E., González-Pérez, J. A., González-Vila, F. J. & Ball, A. S. Soil health-a new challenge for microbiologists and chemists. Int. Microbiol. 8, 13–21 (2005).
Janvier, C. et al. Soil health through soil disease suppression: which strategy from descriptors to indicators? Soil Biol. Biochem. 39, 1–23 (2007).
Wang, X. Y., Sun, B. O., Mao, J. D., Sui, Y. Y. & Cao, X. Y. Structural convergence of maize and wheat straw during two-year decomposition under different climate conditions. Environ. Sci. Technol. 46, 7159–7165 (2012).
Yang, H. S. et al. Long-term ditch-buried straw return alters soil water potential, temperature, and microbial communities in a rice-wheat rotation system. Soil Till. Res. 163, 21–31 (2016).
Zhao, S. C. et al. Changes in soil microbial community, enzyme activities and organic matter fractions under long-term straw return in north-central China. Agri. Ecosyst. Environ 216, 82–88 (2016).
Chen, Z. M. et al. Changes in soil microbial community and organic carbon fractions under short-term straw return in a rice-wheat cropping system. Soil Till. Res. 165, 121–127 (2017).
Su, Y. et al. Long-term of decomposed straw return positively affects the soil microbial community. J. Appl. Microbiol. 128, 138–150 (2019).
Ciavatta, C., Govi, M., Antisari, L. V. & Sequi, P. Determination of organic carbon in aqueous extracts of soils and fertilizers. Commun. Soil Sci. Plan 22, 795–807 (1991).
Mulvaney, R. L. & Khan, S. Diffusion Methods to Determine Different Forms of Nitrogen in Soil Hydrolysates. Soil Sci. Soc. Am. J 65, 1284–1292 (2001).
Page, A. L. & Miller, R. H. Keeney & Dennis. R. Methods of soil analysis. Catena 42, 345–346 (1982).
Shen, S. C. et al. Competitive effect of Pistia stratiotes to rice and its impacts on rice yield and soil nutrients. Acta Ecologica Sinica. 33, 5523–5530 (2013).
Yang, L. H. et al. Generation and characterization of PgPRIP1 transgenic wheat plants with enhanced resistance to take-all and common root rot. Acta Agronomica Sinica 39, 1576–1581 (2013).
Campbell, C. D., Chapman, S. J., Cameron, C. M., Davidson, M. S. & Potts, J. M. A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil. Appl. Environ. Microbiol. 69, 2593–3599 (2003).
Campbell, C. D., Graystona, S. J. & Hirst, D. J. Use of rhizosphere carbon sources in sole carbon source tests to discriminate soil microbial communities. J. Microbiol. Meth. 30, 33–41 (1997).
Yu, M. et al. Influence of Phanerochaete chrysosporium on microbial communities and lignocellulose degradation during solid-state fermentation of rice straw. Process Biochem. 44, 17–22 (2009).
Gong, W., Yan, X. Y., Wang, J. Y., Hu, T. X. & Gong, Y. B. Long-term manure and fertilizer effects on soil organic matter fractions and microbes under a wheat-maize cropping system in northern China. Geoderma. 149, 318–324 (2009).
Zaitlin, B., Turkington, K., Parkinson, D. & Clayton, G. Effects of tillage and inorganic fertilizers on culturable soil actinomycete communities and inhibion of fungi by specific actinomycetes. Appl. Soil Ecol. 26, 53–62 (2004).
El-Tarabily, K. A. & Sivasithamparam, K. Non-streptomycete actinomycetes as biocontrol agents of soil-borne fungal plant pathogens and as plant growth promoters. Soil Biol. Biochem. 38, 1505–1520 (2006).
Fernando, W. G. D., Parks, P. S., Tomm, G., Viau, L. V. & Jurke, C. First report of the Blackleg disease caused by Leptosphaeria maculans on canola in Brazil. Plant Dis. 87, 314 (2003).
Pascault, N. et al. In situ dynamics and spatial heterogeneity of soil bacterial communities under different crop residue management. Microb. Ecol. 60, 291–303 (2010).
Bernard, L. et al. Dynamics and identification of soil microbial populations actively assimilating carbon from 13C-labelled wheat residue as estimated by DNA- and RNA- SIP technique. Environ. Microbiol. 9, 752–764 (2007).
DeBruyn, J. M., Nixon, L. T., Fawaz, M. N., Johnson, A. M. & Radosevich, M. Global biogeography and quantitative seasonal dynamics of Gemmatimonadetes in soil. Appl. Environ. Microbiol. 77, 6295–6300 (2011).
Wang, J. Z. et al. Crop yield and soil organic matter after long-term straw return to soil in China. Nutr. Cycl. Agroecosyst. 102, 371–381 (2015).
Fierer, N., Bradford, M. A. & Jackson, R. B. Toward an ecological classification of soil bacteria. Ecology. 88, 1354–1364 (2007).
Pascault, N. et al. Stimulation of different functional groups of bacteria by various plant residues as a driver of soil priming effect. Ecosystems 16, 810–822 (2013).
Angers, D. A., Bissonnette, N., Légère, A. & Samson, N. Microbial and biochemical changes induced by rotation and tillage in a soil under barley production. Can. J. Soil Sci. 73, 39–50 (1993).
Rochette, P., Angers, D. A. & Flanagan, L. B. Maize residue decomposition measurement using soil surface carbon dioxide fluxes and natural abundance of carbon-13. Soil Sci. Soc. Am. J 63, 1385–1396 (1999).
Guo, X. W., Fernando, W. G. D. & Entz, M. Effects of crop rotation and tillage on blackleg disease of canola. Can. J. Plant Pathol. 27, 53–57 (2005).
Wei, X., Chen, J., Zhang, C. & Pan, D. A new Oidiodendron maius strain isolated from rhododendron fortunei and its effects on nitrogen uptake and plant growth. Front. Microbiol. 7, 1327 (2016).
Richardson, M. The ecology of the Zygomycetes and its impact on environmental exposure. Clin. Mcirobiol. Infec 15, 2–9 (2009).
Diakhaté, S. et al. Soil microbial functional capacity and diversity in a millet-shrub intercropping system of semi-arid Senegal. J. Arid. Environ. 129, 71–79 (2016).
Haichar, F. E. Z., Marol, C., Berge, O., Rangel, J. I. & Prosser, J. I. Plant host habitat and root exudates shaped soil bacterial community structure. ISME J. 2, 1221–1230 (2008).
Cromack, K. & Crossley, D. A. The role of oxalic acid and bicarbonate in calcium cycling by fungi and bacteria: some possible implications for soil animals. Ecolog. Bulletin 25, 246–252 (1977).
Tian, M. & Kamoun, S. A phytophthora infestans cystatin-like protein targets a novel tomato papain-like apoplastic protease. Plant Physiol. 143, 364–377 (2007).
Kljujev, I. & Raicevic, V. Effect of UV treatment, vinegar and citric acid on removal pathogen bacteria from fruit and vegetables. Soil Plant 1, 1–3 (2008).
Fernandez, O., Bethencourt, L., Quero, A., Sangwan, R. S. & Clément, C. Trehalose and plant stress responses: friend or foe? Trends Plant Sci 15, 409–417 (2010).
Brodmann, A. et al. Induction of trehalase in Arabidopsis plants infected with the trehalose-producing pathogen Plasmodiophora brassicae. Mol. Plant Mcirob. Interact 15, 693–700 (2002).
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