in

A light-dependent molecular link between competition cues and defence responses in plants

  • 1.

    Schmitt, J., Stinchcombe, J. R., Heschel, M. S. & Huber, H. The adaptive evolution of plasticity: phytochrome-mediated shade avoidance responses. Integr. Comp. Biol. 43, 459–469 (2003).

    • PubMed
    • Google Scholar
  • 2.

    Farmer, E. E. Leaf Defence (Oxford Univ. Press, 2014).

  • 3.

    Wasternack, C. & Feussner, I. The oxylipin pathways: biochemistry and function. Annu. Rev. Plant Biol. 69, 363–386 (2018).

  • 4.

    Howe, G. A., Major, I. T. & Koo, A. J. Modularity in jasmonate signaling for multistress resilience. Annu. Rev. Plant Biol. 69, 387–415 (2018).

  • 5.

    Monte, I. et al. A single JAZ repressor controls the jasmonate pathway in Marchantia polymorpha. Mol. Plant 12, 185–198 (2019).

  • 6.

    Guo, Q. et al. JAZ repressors of metabolic defense promote growth and reproductive fitness in Arabidopsis. Proc. Natl Acad. Sci. USA 115, E10768–E10777 (2018).

  • 7.

    Moreno, J. E., Tao, Y., Chory, J. & Ballaré, C. L. Ecological modulation of plant defense via phytochrome control of jasmonate sensitivity. Proc. Natl Acad. Sci. USA 106, 4935–4940 (2009).

  • 8.

    Ballaré, C. L. & Austin, A. T. Recalculating growth and defense strategies under competition: key roles of photoreceptors and jasmonates. J. Exp. Bot. 70, 3425–3434 (2019).

    • PubMed
    • Google Scholar
  • 9.

    Campos, M. L. et al. Rewiring of jasmonate and phytochrome B signalling uncouples plant growth-defense tradeoffs. Nat. Commun. 7, 12570 (2016).

  • 10.

    Ballaré, C. L. Light regulation of plant defense. Annu. Rev. Plant Biol. 65, 335–363 (2014).

    • PubMed
    • Google Scholar
  • 11.

    de Wit, M., Galvão, V. C. & Fankhauser, C. Light-mediated hormonal regulation of plant growth and development. Annu. Rev. Plant Biol. 67, 613–617 (2016).

    • Google Scholar
  • 12.

    Cerrudo, I. et al. Low red/far-red ratios reduce Arabidopsis resistance to Botrytis cinerea and jasmonate responses via a COI1-JAZ10-dependent, salicylic acid-independent mechanism. Plant Physiol. 158, 2042–2052 (2012).

  • 13.

    Leone, M., Keller, M. M., Cerrudo, I. & Ballaré, C. L. To grow or defend? Low red:far-red ratios reduce jasmonate sensitivity in Arabidopsis seedlings by promoting DELLA degradation and increasing JAZ10 stability. New Phytol. 204, 355–367 (2014).

  • 14.

    Chico, J. M. et al. Repression of jasmonate-dependent defenses by shade involves differential regulation of protein stability of MYC transcription factors and their JAZ repressors in Arabidopsis. Plant Cell 26, 1967–1980 (2014).

  • 15.

    Liu, Y. et al. Arabidopsis FHY3 and FAR1 proteins regulate the balance between growth and defense responses under shade conditions. Plant Cell 31, 2089–2106 (2019).

  • 16.

    Yamashino, T., Kitayama, M. & Mizuno, T. Transcription of ST2A encoding a sulfotransferase family protein that is involved in jasmonic acid metabolism is controlled according to the circadian clock- and PIF4/PIF5-mediated external coincidence mechanism in Arabidopsis thaliana. Biosci. Biotech. Bioch. 77, 2454–2460 (2013).

    • CAS
    • Google Scholar
  • 17.

    Oh, E., Zhu, J.-Y. & Wang, Z.-Y. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses. Nat. Cell Biol. 14, 802 (2012).

  • 18.

    Leivar, P. & Quail, P. H. PIFs: pivotal components in a cellular signaling hub. Trends Plant Sci. 16, 19–28 (2011).

  • 19.

    Lorrain, S., Allen, T., Duek, P. D., Whitelam, G. C. & Fankhauser, C. Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors. Plant J. 53, 312–323 (2008).

  • 20.

    Li, L. et al. Linking photoreceptor excitation to changes in plant architecture. Genes Dev. 26, 785–790 (2012).

  • 21.

    Hirschmann, F., Krause, F. & Papenbrock, J. The multi-protein family of sulfotransferases in plants: composition, occurrence, substrate specificity, and functions. Front. Plant Sci. 5, 556 (2014).

  • 22.

    Koprivova, A. & Kopriva, S. Sulfation pathways in plants. Chem. Biol. Int. 259, 23–30 (2016).

    • CAS
    • Google Scholar
  • 23.

    Gidda, S. K. et al. Biochemical and molecular characterization of a hydroxyjasmonate sulfotransferase from Arabidopsis thaliana. J. Biol. Chem. 278, 17895–17900 (2003).

  • 24.

    Baumann, E. Ueber aulfosäuren im harn. Ber. Dtsch. Chem. Ges. 9, 54–58 (1876).

    • Google Scholar
  • 25.

    Gamage, N. et al. Human sulfotransferases and their role in chemical metabolism. Toxicol. Sci. 90, 5–22 (2006).

  • 26.

    Komori, R., Amano, Y., Ogawa-Ohnishi, M. & Matsubayashi, Y. Identification of tyrosylprotein sulfotransferase in Arabidopsis. Proc. Natl Acad. Sci. USA 106, 15067–15072 (2009).

  • 27.

    Agrawal, A., Kearney, E., Hastings, A. & Ramsey, T. Attenuation of the jasmonate burst, plant defensive traits, and resistance to specialist monarch caterpillars on shaded common milkweed (Asclepias syriaca). J. Chem. Ecol. 38, 893–901 (2012).

  • 28.

    Acosta, I. F. et al. Role of NINJA in root jasmonate signaling. Proc. Natl Acad. Sci. USA 110, 15473–15478 (2013).

  • 29.

    Heitz, T., Smirnova, E., Marquis, V. & Poirier, L. Metabolic control within the jasmonate biochemical pathway. Plant Cell Physiol. 60, 2621–2628 (2019).

    • Google Scholar
  • 30.

    Smirnova, E. et al. Jasmonic acid oxidase 2 hydroxylates jasmonic acid and represses basal defense and resistance responses against Botrytis cinerea infection. Mol. Plant 10, 1159–1173 (2017).

  • 31.

    Halkier, B. A. & Gershenzon, J. Biology and biochemistry of glucosinolates. Annu. Rev. Plant Biol. 57, 303–333 (2006).

    • CAS
    • Google Scholar
  • 32.

    Mugford, S. G. et al. Disruption of adenosine-5′-phosphosulfate kinase in Arabidopsis reduces levels of sulfated secondary metabolites. Plant Cell 21, 910–927 (2009).

  • 33.

    Yan, Y. et al. A downstream mediator in the growth repression limb of the jasmonate pathway. Plant Cell 19, 2470–2483 (2007).

  • 34.

    Zhang, Y. & Turner, J. G. Wound-induced endogenous jasmonates stunt plant growth by inhibiting mitosis. PLoS ONE 3, e3699 (2008).

  • 35.

    Robson, F. et al. Jasmonate and phytochrome A signaling in Arabidopsis wound and shade responses are integrated through JAZ1 stability. Plant Cell 22, 1143–1160 (2010).

  • 36.

    de Wit, M. et al. Perception of low red:far-red ratio compromises both salicylic acid- and jasmonic acid-dependent pathogen defences in Arabidopsis. Plant J. 75, 90–103 (2013).

    • PubMed
    • Google Scholar
  • 37.

    de Wit, M., Ljung, K. & Fankhauser, C. Contrasting growth responses in lamina and petiole during neighbor detection depend on differential auxin responsiveness rather than different auxin levels. New Phytol. 208, 198–209 (2015).

    • PubMed
    • Google Scholar
  • 38.

    Park, J.-H. et al. A knock-out mutation in allene oxide synthase results in male sterility and defective wound signal transduction in Arabidopsis due to a block in jasmonic acid biosynthesis. Plant J. 31, 1–12 (2002).

    • PubMed
    • Google Scholar
  • 39.

    Fernández-Calvo, P. et al. The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. Plant Cell 23, 701–715 (2011).

  • 40.

    Zhang, T. et al. Hormone crosstalk in wound stress response: wound-inducible amidohydrolases can simultaneously regulate jasmonate and auxin homeostasis in Arabidopsis thaliana. J. Exp. Bot. 67, 2107–2120 (2015).

  • 41.

    Schumacher, P. et al. A phosphorylation switch turns a positive regulator of phototropism into an inhibitor of the process. Nat. Commun. 9, 2403 (2018).

  • 42.

    Zhang, B. et al. BLADE-ON-PETIOLE proteins act in an E3 ubiquitin ligase complex to regulate PHYTOCHROME INTERACTING FACTOR 4 abundance. eLife 22, 26759 (2017).

    • Google Scholar
  • 43.

    Ballaré, C. L., Scopel, A. L. & Sánchez, R. A. Far-red radiation reflected from adjacent leaves: an early signal of competition in plant canopies. Science 247, 329–332 (1990).

    • PubMed
    • Google Scholar
  • 44.

    Mazza, C. A. & Ballaré, C. L. Photoreceptors UVR8 and phytochrome B cooperate to optimize plant growth and defense in patchy canopies. New Phytol. 207, 4–9 (2015).

    • PubMed
    • Google Scholar
  • 45.

    Cerrudo, I. et al. Exploring growth-defence trade-offs in Arabidopsis: phytochrome B inactivation requires JAZ10 to suppress plant immunity but not to trigger shade-avoidance responses. Plant Cell Environ. 40, 635–644 (2017).

  • 46.

    Tusher, V. G., Tibshirani, R. & Chu, G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl Acad. Sci. USA 98, 5116–5121 (2001).

    • CAS
    • Google Scholar
  • 47.

    Li, C. & Wong, W. H. in The Analysis of Gene Expression Data: Methods and Software (eds. Parmigiani, G. et al.) 120–141 (Springer, 2003).

  • 48.

    Gendrel, A. V., Lippman, Z., Martienssen, R. & Colot, V. Profiling histone modification patterns in plants using genomic tiling microarrays. Nat. Methods 2, 213–218 (2005).

  • 49.

    Hornitschek, P., Lorrain, S., Zoete, V., Michielin, O. & Fankhauser, C. Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers. EMBO J. 28, 3893–3902 (2009).

  • 50.

    Mi, H., Muruganujan, A., Casagrande, J. T. & Thomas, P. D. Large-scale gene function analysis with the PANTHER classification system. Nat. Protoc. 8, 1551 (2013).

  • 51.

    Vadassery, J. et al. CML42-mediated calcium signaling coordinates responses to Spodoptera herbivory and abiotic stresses in Arabidopsis. Plant Physiol. 159, 1159–1175 (2012).

  • 52.

    Koo, A. J. et al. Endoplasmic reticulum-associated inactivation of the hormone jasmonoyl-l-isoleucine by multiple members of the cytochrome P450 94 family in Arabidopsis. J. Biol. Chem. 289, 29728–29738 (2014).

  • 53.

    Koo, A. J. K., Cooke, T. F. & Howe, G. A. Cytochrome P450 CYP94B3 mediates catabolism and inactivation of the plant hormone jasmonoyl-l-isoleucine. Proc. Natl Acad. Sci. USA 108, 9298–9303 (2011).

  • 54.

    Heitz, T. et al. in Lipids in Plant and Algae Development (eds. Nakamura, Y. & Li-Beisson, Y.) 405–426 (Springer, 2016).

  • 55.

    Burow, M., Muller, R., Gershenzon, J. & Wittstock, U. Altered glucosinolate hydrolysis in genetically engineered Arabidopsis thaliana and its influence on the larval development of Spodoptera littoralis. J. Chem. Ecol. 32, 2333–2349 (2006).

  • 56.

    Cargnel, M. D., Demkura, P. V. & Ballaré, C. L. Linking phytochrome to plant immunity: low red:far-red ratios increase Arabidopsis susceptibility to Botrytis cinerea by reducing the biosynthesis of indolic glucosinolates and camalexin. New Phytol. 204, 342–354 (2014).

  • 57.

    Jeschke, V., Gershenzon, J. & Vassão, D. G. A mode of action of glucosinolate-derived isothiocyanates: detoxification depletes glutathione and cysteine levels with ramifications on protein metabolism in Spodoptera littoralis. Insect Biochem. Mol. Biol. 71, 37–48 (2016).

  • 58.

    Piotrowski, M. et al. Desulfoglucosinolate sulfotransferases from Arabidopsis thaliana catalyze the final step in the biosynthesis of the glucosinolate core structure. J. Biol. Chem. 279, 50717–50725 (2004).

  • 59.

    Ronquist, F. & Huelsenbeck, J. P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572–1574 (2003).

    • CAS
    • Google Scholar
  • 60.

    Tamura, K. et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731–2739 (2011).


  • Source: Ecology - nature.com

    Dance of the honeybee

    Temperature-dependent competitive advantages of an allelopathic alga over non-allelopathic alga are altered by pollutants and initial algal abundance levels