in

Genetic structure in Orkney island mice: isolation promotes morphological diversification

  • Adams DC (2014) A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data. Syst Biol 63(5):685–697.

    PubMed  Article  PubMed Central  Google Scholar 

  • Adams DC, Otarola-Castillo E (2013) geomorph: an R package for the collection and analysis of geometric morphometric shape data. Methods Ecol Evol 4:393–399.

    Article  Google Scholar 

  • Berry RJ (1996) Small mammal differentiation on islands. Philos Trans R Soc Lond B 351(1341):753–764.

    CAS  Article  Google Scholar 

  • Berry RJ, Tricker BJK (1969) Competition and extinction: the mice of Foula, with notes on those of Fair Isle and St Kilda. J Zool Lond 158:247–265.

    Article  Google Scholar 

  • Bonhomme F, Orth A, Cucchi T, Rajabi-Maham H, Catalan J, Boursot P et al. (2011) Genetic differentiation of the house mouse around the Mediterranean basin: matrilineal footprints of early and late colonization. Proc R Soc Lond Biol Sci 278:1034–1043.

    Google Scholar 

  • Britton-Davidian J, Caminade P, Davidian E, Pagès M (2017) Does chromosomal change restrict gene flow between house mouse populations (Mus musculus domesticus)? Evidence from microsatellite polymorphisms. Biol J Linn Soc 122(1):224–240.

    Article  Google Scholar 

  • Cucchi T (2008) Uluburun shipwreck stowaway house mouse: molar shape analysis and indirect clues about the vessel’s last journey. J Archaeol Sci 35:2953–2959.

    Article  Google Scholar 

  • Cucchi T, Barnett R, Martinkova N, Renaud S, Renvoisé E, Evin A et al. (2014) The changing pace of insular life: 5000 years of microevolution in the Orkney vole (Microtus arvalis orcadensis). Evolution 68(10):2804–2820.

    PubMed  PubMed Central  Article  Google Scholar 

  • Cucchi T, Kovács ZE, Berthon R, Orth A, Bonhomme F, Evin A et al. (2013) On the trail of Neolithic mice and men towards Transcaucasia: zooarchaeological clues from Nakhchivan (Azerbaijan). Biol J Linn Soc 108:917–928.

    Article  Google Scholar 

  • Cucchi T, Papayianni K, Cersoy S, Aznar-Cormano L, Zazzo A, Debruyne R et al. (2020) Tracking the Near Eastern origins and European dispersal of the western house mouse. Sci Rep 10:8276.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  • Cucchi T, Vigne J-D, Auffray J-C (2005) First occurrence of the house mouse (Mus musculus domesticus Schwarz & Schwarz, 1943) in the Western Mediterranean: a zooarchaeological revision of subfossil occurrences. Biol J Linn Soc 84:429–445.

    Article  Google Scholar 

  • Dolédec S, Chessel D (1994) Co-inertia analysis: an alternative method for studying species-environment relationships. Freshw Biol 31(3):277–294.

    Article  Google Scholar 

  • Dray S, Dufour A-B (2007) The ade4 package: implementing the duality diagram for ecologists. J Stat Softw 22:1–20.

    Article  Google Scholar 

  • Escoufier Y (1973) Le traitement des variables vectorielles. Biometrics 29(4):751–760.

    Article  Google Scholar 

  • Excoffier L, Lischer HEL (2010) Arlequin suite ver 3. 5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567.

    PubMed  Article  PubMed Central  Google Scholar 

  • Fairley JS, Smal CM (1987) Feral house mice in Ireland. Ir Naturalists’ J 22(7):284–290.

    Google Scholar 

  • Gabriel SI, Mathias MDL, Searle JB (2013) Genetic structure of house mouse (Mus musculus Linnaeus 1758) populations in the Atlantic archipelago of the Azores: colonization and dispersal. Biol J Linn Soc 108(4):929–940.

    Article  Google Scholar 

  • Gabriel SI, Mathias ML, Searle JB (2015) Of mice and the ‘Age of Discovery’: the complex history of colonization of the Azorean archipelago by the house mouse (Mus musculus) as revealed by mitochondrial DNA variation. J Evolut Biol 28(1):130–114.

    CAS  Article  Google Scholar 

  • Ganem G (1998) Behavioural and physiological characteristics of standard and chromosomally divergent populations of house mice from the Orkney archipelago (Scotland). Acta Theriol 43(1):23–38.

    Article  Google Scholar 

  • García-Rodríguez O, Andreou D, Herman JS, Mitsainas GP, Searle JB, Bonhomme F et al. (2018) Cyprus as an ancient hub for house mice and humans. J Biogeogr 45:2618–2630.

    Article  Google Scholar 

  • Gilbert E, O’Reilly S, Merrigan M, McGettigan D, Vitart V, Joshi PK et al. (2019) The genetic landscape of Scotland and the Isles. Proc Natl Acad Sci USA 116(38):201904761.

    Article  CAS  Google Scholar 

  • Gingerich PD, Smith BH, Rosenberg K (1982) Allometric scaling in the dentition of primates and prediction of body weight from tooth size in fossils. Am J Phys Anthropol 58:81–100.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  • Günduz İ, Auffray J-C, Britton-Davidian J, Catalan J, Ganem G, Ramalhinho MG et al. (2001) Molecular studies on the colonization of the Madeiran archipelago by house mice. Mol Ecol 10:2023–2029.

    PubMed  Article  PubMed Central  Google Scholar 

  • Hardouin E, Chapuis J-L, Stevens MI, van Vuuren JB, Quillfeldt P, Scavetta RJ et al. (2010) House mouse colonization patterns on the sub-Antarctic Kerguelen Archipelago suggest singular primary invasions and resilience against re-invasion. BMC Evolut Biol 10:325.

    Article  Google Scholar 

  • Hayden L, Lochovska L, Sémon M, Renaud S, Delignette-Muller M-L, Vicot M et al. (2020) Developmental variability channels mouse molar evolution. eLife 9:e50103.

    PubMed  PubMed Central  Article  Google Scholar 

  • Jombart T, Devillard S, Balloux F (2010) Discriminant analysis of principal components: a new method for the analysis of genetically structured populations. BMC Genet 11(1):94.

    PubMed  PubMed Central  Article  Google Scholar 

  • Jones EP, Eager HM, Gabriel SI, Jóhannesdóttir F, Searle JB (2013) Genetic tracking of mice and other bioproxies to infer human history. Trends Genet 29(5):298–308.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  • Jones EP, Jensen J-K, Magnussen E, Gregersen N, Hansen HS, Searle JB (2011a) A molecular characterization of the charismatic Faroe house mouse. Biol J Linn Soc 102:471–482.

    Article  Google Scholar 

  • Jones EP, Jóhannesdóttir F, Gündüz İ, Richards MB, Searle JB (2011b) The expansion of the house mouse into north-western Europe. J Zool Lond 283(4):257–268.

    Article  Google Scholar 

  • Jones EP, Skirnisson K, McGovern T, Gilbert M, Willerslev E, Searle JB (2012) Fellow travellers: a concordance of colonization patterns between mice and men in the North Atlantic region. BMC Evolut Biol 12(1):35.

    Article  Google Scholar 

  • Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33:1870–1874.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  • Ledevin R, Chevret P, Ganem G, Britton-Davidian J, Hardouin EA, Chapuis J-L et al. (2016) Phylogeny and adaptation shape the teeth of insular mice. Proc R Soc Lond Biol Sci 283:20152820.

    Google Scholar 

  • Leigh JW, Bryant D (2015) POPART: full-feature software for haplotype network construction. Methods Ecol Evol 6(9):1110–1116.

    Article  Google Scholar 

  • Leslie S, Winney B, Hellenthal G, Davison D, Boumertit A, Day T et al. (2015) The fine-scale genetic structure of the British population. Nature 519(7543):309–314.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  • Lomolino MV (1985) Body size of mammals on islands: the island rule reexamined. Am Naturalist 125:310–316.

    Article  Google Scholar 

  • Lomolino MV (2005) Body size evolution in insular vertebrates: generality of the island rule. J Biogeogr 32:1683–1699.

    Article  Google Scholar 

  • Lomolino MV, Sax DF, Palombo MR, van der Geer AA (2012) Of mice and mammoths: evaluations of causal explanations for body size evolution in insular mammals. J Biogeogr 39:842–854.

    Article  Google Scholar 

  • Losos JB, Ricklefs RE (2009) Adaptation and diversification on islands. Nature 457(7231):830–836.

    CAS  PubMed  Article  Google Scholar 

  • Martínková N, Barnett R, Cucchi T, Struchen R, Pascal M, Pascal M et al. (2013) Divergent evolutionary processes associated with colonization of offshore islands. Mol Ecol 22:5205–5220.

    PubMed  PubMed Central  Article  Google Scholar 

  • Millien V (2006) Morphological evolution is accelerated among island mammals. PLoS Biol 4(10):e321.

    PubMed  PubMed Central  Article  Google Scholar 

  • Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O’Hara RB et al. (2013) Vegan: Community Ecology Package. R Package Version. 2.0-10. CRAN.

  • Peres-Neto PR, Jackson DA (2001) How well do multivariate data sets match? The advantages of a Procrustean superimposition approach over the Mantel test. Oecologia 129(2):169–178.

    PubMed  Article  PubMed Central  Google Scholar 

  • Pocock MJO, Searle JB, White PCL (2004) Adaptations of animals to commensal habitats: population dynamics of house mice Mus musculus domesticus on farms. J Anim Ecol 73:878–888.

    Article  Google Scholar 

  • Polly PD (2004) On the simulation of the evolution of morphological shape: multivariate shape under selection and drift. Palaeontol Electron 7(2):7A:28.

    Google Scholar 

  • Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155(2):945–959.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Renaud S, Chevret P, Michaux J (2007) Morphological vs. molecular evolution: ecology and phylogeny both shape the mandible of rodents. Zool Scr 36:525–535.

    Article  Google Scholar 

  • Renaud S, Hardouin EA, Quéré J-P, Chevret P (2017) Morphometric variations at an ecological scale: seasonal and local variations in feral and commensal house mice. Mamm Biol 87:1–12.

    Article  Google Scholar 

  • Renaud S, Ledevin R, Souquet L, Gomes Rodrigues H, Ginot S, Agret S et al. (2018) Evolving teeth within a stable masticatory apparatus in Orkney mice. Evolut Biol 45(4):405–424.

    Article  Google Scholar 

  • Renaud S, Pantalacci S, Auffray J-C (2011) Differential evolvability along lines of least resistance of upper and lower molars in island house mice. PLoS One 6(5):e18951.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  • Romaniuk AA, Shepherd AN, Clarke DV, Sheridan AJ, Fraser S, Bartosiewicz L et al. (2016) Rodents: food or pests in Neolithic Orkney. R Soc Open Sci 3(10):160514.

    PubMed  PubMed Central  Article  Google Scholar 

  • Ronquist F, Teslenko M, Pvd Mark, Ayres D, Darling A, Höhna S et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61(3):539–542.

    PubMed  PubMed Central  Article  Google Scholar 

  • Rozas J, Ferrer-Mata A, Sánchez-DelBarrio JC, Guirao-Rico S, Librado P, Ramos-Onsins SE et al. (2017) DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol Biol Evol 34:3299–3302.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  • Searle JB, Jones CS, Gündüz İ, Scascitelli M, Jones EP, Herman JS et al. (2009) Of mice and (Viking?) men: phylogeography of British and Irish house mice. Proc R Soc Lond Biol Sci 276:201–207.

    CAS  Google Scholar 

  • Sendell-Price AT, Ruegg KC, Clegg SM (2020) Rapid morphological divergence following a human-mediated introduction: the role of drift and directional selection. Heredity 124:535–549.

    PubMed  PubMed Central  Article  Google Scholar 

  • Solano E, Franchini P, Colangelo P, Capanna E, Castiglia R (2013) Multiple origins of the western European house mouse in the Aeolian Archipelago: clues from mtDNA and chromosomes. Biol Invasions 15(4):729–739.

    Article  Google Scholar 

  • Souquet L, Chevret P, Ganem G, Auffray J-C, Ledevin R, Agret S et al. (2019) Back to the wild: does feralization affect the mandible of non-commensal house mice (Mus musculus domesticus)? Biol J Linn Soc 126:471–486.

    Article  Google Scholar 

  • van der Geer AA, Lyras GA, Lomolino MV, Palombo MR, Sax DF (2013) Body size evolution of palaeo-insular mammals: temporal variations and interspecific interactions. J Biogeogr 40:1440–1450.

    Article  Google Scholar 


  • Source: Ecology - nature.com

    MIT researchers highlight the impacts of logjams in river restoration projects

    Identifying volatile organic compounds used for olfactory navigation by homing pigeons