Philippa Kaur

Mixing fire occurrence with wildfire activity is problematic also when trying to draw policy conclusions. Fang et al.1 examined the temporal pattern of fire numbers between 2005-18 and concluded that the application of a fire suppression policy after 1987 has contributed to decreases in fire occurrences after 2007. However, fire suppression is an effort to mitigate the results of a fire once it has started10. Consequently, fire suppression strictly affects the burned area, and not fire occurrence. Other aspects associated with fire planning, like awareness campaigns or fire bans, may act on fire occurrence. However, any relationship between fire occurrence and fire suppression will necessarily be artefactual because the latter does not affect the former.We acknowledge that part of the discrepancy with Fang et al.1 may lie in the different scales used in these analyses. However, fire activity is a term that currently lacks a rigorous definition and should be used with caution. Fire occurrence depends primarily on the number of ignitions (along with other factors affecting fire detection such as climate, topography or vegetation), which, in turn, results from human activity1 and, in some areas, lightning11. Using fire occurrence as an indicator for fire activity is particularly problematic when comparing multiple biomes that show marked differences in fire regime, as we demonstrate here. Additionally, ENSO and fire suppression may both affect burned area, but there is currently no mechanism that can explain a mechanistic link between either of these processes and the number of fire events. Consequently, fire occurrence should not be used as a sole metric of fire activity.We additionally note that burned area is not necessarily a reliable metric of fire impacts on ecosystems and society. Significant variation in severity and intensity may occur within a fire perimeter12. Additionally, damage to people and property are not captured by this metric13. While we caution against the use of a single metric to evaluate fire activity, we hope to have demonstrated that using fire occurrence alone is particularly problematic, and that the picture it paints is rather unrealistic. More

MacLachlan, N. J. & Guthrie, A. J. Re-emergence of bluetongue, African horse sickness, and other Orbivirus diseases. Vet. Res. https://doi.org/10.1051/vetres/2010007 (2010).Article 
PubMed 
PubMed Central 

Google Scholar 
Koenraadt, C. J. M. et al. Bluetongue, Schmallenberg—What is next? Culicoides-borne viral diseases in the 21st Century. BMC Res. Notes 10, 77 (2014).
Google Scholar 
Dennis, S. J., Meyers, A. E., Hitzeroth, I. I. & Rybicki, E. P. African horse sickness: A review of current understanding and vaccine development in the. Viruses 11, 844 (2019).CAS 
PubMed Central 
Article 

Google Scholar 
Collins, Á. B., Doherty, M. L., Barrett, D. J. & Mee, J. F. Schmallenberg virus: A systematic international literature review (2011–2019) from an Irish perspective. Ir. Vet. J. 72, 1–22 (2019).Article 

Google Scholar 
Tkuwet, G. & Firesbhat, A. A review on African horse sickness. Eur. J. Appl. Sci. 7, 213–219 (2015).CAS 

Google Scholar 
Mellor, P. S. & Hamblin, C. African horse sickness. Vet. Res. 35, 445–466 (2004).PubMed 
Article 

Google Scholar 
Coetzee, P., Stokstad, M., Venter, E. H., Myrmel, M. & Van Vuuren, M. Bluetongue: A historical and epidemiological perspective with the emphasis on South Africa. Virol. J. 9, 198 (2012).PubMed 
PubMed Central 
Article 

Google Scholar 
Cagienard, A., Griot, C., Mellor, P. S., Denison, E. & Stärk, K. D. Bluetongue vector species of Culicoides in Switzerland. Med. Vet. Entomol. 20, 239–247 (2006).CAS 
PubMed 
Article 

Google Scholar 
Oluwayelu, D., Adebiyi, A. & Tomori, O. Endemic and emerging arboviral diseases of livestock in Nigeria: A review. Parasit. Vectors 11, 1–12 (2018).Article 

Google Scholar 
Sibhat, B., Ayelet, G., Gebremedhin, E. Z., Skjerve, E. & Asmare, K. Seroprevalence of Schmallenberg virus in dairy cattle in Ethiopia. Acta Trop. 178, 61–67 (2018).PubMed 
Article 

Google Scholar 
Aklilu, N. et al. African horse sickness outbreaks caused by multiple virus types in Ethiopia. Transbound. Emerg. Dis. 61, 185–192 (2014).CAS 
PubMed 
Article 

Google Scholar 
Rojas, J. M., Rodríguez-Martín, D., Martín, V. & Sevilla, N. Diagnosing bluetongue virus in domestic ruminants: Current perspectives. Vet. Med. Res. Rep. 10, 17 (2019).
Google Scholar 
Gizaw, D., Sibhat, D., Ayalew, B. & Sehal, M. Sero-prevalence study of bluetongue infection in sheep and goats in selected areas of Ethiopia. Ethiop. Vet. J. 20, 105 (2016).Article 

Google Scholar 
Abera, T. et al. Bluetongue disease in small ruminants in south western Ethiopia: Cross-sectional sero-epidemiological study. BMC Res. Notes 11, 112 (2018).PubMed 
PubMed Central 
Article 

Google Scholar 
Mellor, P. S., Boorman, J. & Baylis, M. Culicoides biting midges: Their role as arbovirus vectors. Annu. Rev. Entomol. 45, 307–340 (2000).CAS 
PubMed 
Article 

Google Scholar 
Carpenter, S., Groschup, M. H., Garros, C., Felippe-Bauer, M. L. & Purse, B. V. Culicoides biting midges, arboviruses and public health in Europe. Antivir. Res. 100, 102–113 (2013).CAS 
PubMed 
Article 

Google Scholar 
Sick, F., Beer, M., Kampen, H. & Wernike, K. Culicoides biting midges—Underestimated vectors for arboviruses of public health and veterinary importance. Viruses 11, 376 (2019).CAS 
PubMed Central 
Article 

Google Scholar 
Blanda, V. et al. Geo-statistical analysis of Culicoides spp. distribution and abundance in Sicily, Italy. Parasit. Vectors 11, 78 (2018).PubMed 
PubMed Central 
Article 

Google Scholar 
Vasić, A. et al. Species diversity, host preference and arbovirus detection of Culicoides (Diptera: Ceratopogonidae) in south-eastern Serbia. Parasit. Vectors 12, 1–9 (2019).Article 

Google Scholar 
Martin, E. et al. Culicoides species community composition and infection status with parasites in an urban environment of east central Texas, USA. Parasit. Vectors 12, 1–10 (2019).Article 

Google Scholar 
Gusmão, G. M. C., Brito, G. A., Moraes, L. S., Bandeira, M. D. C. A. & Rebêlo, J. M. M. Temporal variation in species abundance and richness of Culicoides (Diptera: Ceratopogonidae) in a tropical equatorial area. J. Med. Entomol. https://doi.org/10.1093/jme/tjz015 (2019).Article 
PubMed 

Google Scholar 
Sghaier, S. et al. New species of the genus Culicoides (Diptera Ceratopogonidae) for Tunisia, with detection of Bluetongue viruses in vectors. Vet. Ital. 53, 357–366 (2017).PubMed 

Google Scholar 
Gordon, S. J. G. et al. The occurrence of Culicoides species, the vectors of arboviruses, at selected trap sites in Zimbabwe. Onderstepoort J. Vet. Res. 82, e1–e8 (2015).PubMed 
Article 
CAS 

Google Scholar 
Villard, P. et al. Modeling Culicoides abundance in mainland France: Implications for surveillance. Parasit. Vectors 12, 1–10 (2019).Article 

Google Scholar 
Diarra, M. et al. Spatial distribution modelling of Culicoides (Diptera: Ceratopogonidae) biting midges, potential vectors of African horse sickness and bluetongue viruses in Senegal. Parasit. Vectors 11, 341 (2018).PubMed 
PubMed Central 
Article 

Google Scholar 
Calvete, C. et al. Spatial distribution of Culicoides imicola, the main vector of bluetongue virus, Spain. Vet. Rec. 158, 130–131 (2006).CAS 
PubMed 
Article 

Google Scholar 
Purse, B. V. et al. Modelling the distributions of Culicoides bluetongue virus vectors in Sicily in relation to satellite-derived climate variables. Med. Vet. Entomol. 18, 90–101 (2004).CAS 
PubMed 
Article 

Google Scholar 
Purse, B. V. et al. Spatial and temporal distribution of bluetongue and its Culicoides vectors in Bulgaria. Med. Vet. Entomol. 20, 335–344 (2006).CAS 
PubMed 
Article 

Google Scholar 
Leta, S. et al. Modeling the global distribution of Culicoides imicola: An ensemble approach. Sci. Rep. 9, 1–9 (2019).ADS 
CAS 
Article 

Google Scholar 
Mulatu, T. & Hailu, A. The occurrence and identification of Culicoides species in the Western Ethiopia. Acad. J. Entomol. 12, 40–43 (2019).
Google Scholar 
Khamala, C. P. M. & Kettle, D. S. The Culicoides Latreille (Diptera: Ceratopogonidae) of East Africa. Trans. R. Entomol. Soc. Lond. 123, 1–95 (1971).Article 

Google Scholar 
Venter, G. J. Specie di Culicoides (Diptera: Ceratopogonidae) vettori del virus della Bluetongue in Sud Africa. Vet. Ital. 51, 325–333 (2015).PubMed 

Google Scholar 
Mathieu, B. et al. Development and validation of IIKC: An interactive identification key for Culicoides (Diptera: Ceratopogonidae) females from the Western Palaearctic region. Parasit. Vectors 5, 137 (2012).PubMed 
PubMed Central 
Article 

Google Scholar 
Thuiller, W., Lafourcade, B., Engler, R. & Araújo, M. B. BIOMOD—A platform for ensemble forecasting of species distributions. Ecography (Cop.) 32, 369–373 (2009).Article 

Google Scholar 
Baylis, M., Bouayoune, H., Touti, J. & El Hasnaoui, H. Use of climatic data and satellite imagery to model the abundance of Culicoides imicola, the vector of African horse sickness virus, in Morocco. Med. Vet. Entomol. 12, 255–266 (1998).CAS 
PubMed 
Article 

Google Scholar 
Diarra, M. et al. Modelling the abundances of two major culicoides (Diptera: Ceratopogonidae) species in the Niayes area of Senegal. PLoS One 10, e0131021 (2015).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Ramilo, D. W., Nunes, T., Madeira, S., Boinas, F. & da Fonseca, I. P. Geographical distribution of Culicoides (DIPTERA: CERATOPOGONIDAE) in mainland Portugal: Presence/absence modelling of vector and potential vector species. PLoS One 12, e0180606 (2017).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Ben Rais Lasram, F. et al. The Mediterranean Sea as a ‘cul-de-sac’ for endemic fishes facing climate change. Glob. Chang. Biol. 16, 3233–3245 (2010).ADS 
Article 

Google Scholar 
Tiffin, P. & Ross-Ibarra, J. Goal-oriented evaluation of species distribution models accuracy and precision: True Skill Statistic profile and uncertainty maps. PeerJ PrePints https://doi.org/10.7287/peerj.preprints.488v1 (2014).Article 

Google Scholar 
Graham, M. H. Confronting multicollinearity in ecological multiple regression. Ecology 84, 2809–2815 (2003).Article 

Google Scholar 
Demissie, G. H. Seroepidemiological study of African horse sickness in southern Ethiopia. Open Sci. Repos. Vet. Med. 10, e70081919 (2013).
Google Scholar 
Zeleke, A., Sori, T., Powel, K., Gebre-Ab, F. & Endebu, B. Isolation and identification of circulating serotypes of African horse sickness virus in Ethiopia. J. Appl. Res. Vet. Med. 3, 40–43 (2005).
Google Scholar 
Ayelet, G. et al. Outbreak investigation and molecular characterization of African horse sickness virus circulating in selected areas of Ethiopia. Acta Trop. 127, 91–96 (2013).PubMed 
Article 

Google Scholar 
Gulima, D. Seroepidemiological study of bluetongue in indigenous sheep in selected districts of Amhara National Regional State, north western Ethiopia. Ethiop. Vet. J. 13, 1–15 (2009).
Google Scholar 
Borkent, A. & Dominiak, P. Catalog of the biting midges of the world (Diptera: Ceratopogonidae). Zootaxa 4787, 1–377 (2020).Article 

Google Scholar 
Borkent, A. & Wirth, W. W. World species of biting midges (Diptera: Ceratopogonidae). Bull. Am. Museum Nat. Hist. 233, 5–195 (1997).
Google Scholar 
Guichard, S. et al. Worldwide niche and future potential distribution of Culicoides imicola, a major vector of bluetongue and African horse sickness viruses. PLoS One 9, e112491 (2014).ADS 
PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Becker, E. E. E., Venter, G. J., Labuschagne, K., Greyling, T. & van Hamburg, H. Occurrence of Culicoides species Diptera: Ceratopogonidae) in the Khomas region of Namibia during the winter months. Vet. Ital. 48, 45–54 (2012).PubMed 

Google Scholar 
Capela, R. et al. Spatial distribution of Culicoides species in Portugal in relation to the transmission of African horse sickness and bluetongue viruses. Med. Vet. Entomol. 17, 165–177 (2003).CAS 
PubMed 
Article 

Google Scholar 
Calvete, C. et al. Modelling the distributions and spatial coincidence of bluetongue vectors Culicoides imicola and the Culicoides obsoletus group throughout the Iberian peninsula. Med. Vet. Entomol. 22, 124–134 (2008).CAS 
PubMed 
Article 

Google Scholar 
Riddin, M. A., Venter, G. J., Labuschagne, K. & Villet, M. H. Culicoides species as potential vectors of African horse sickness virus in the southern regions of South Africa. Med. Vet. Entomol. 33, 498–511 (2019).CAS 
PubMed 
Article 

Google Scholar 
Foxi, C. et al. Role of different Culicoides vectors (Diptera: Ceratopogonidae) in bluetongue virus transmission and overwintering in Sardinia (Italy). Parasit. Vectors 9, 440 (2016).PubMed 
PubMed Central 
Article 

Google Scholar 
Musuka, G. N., Mellor, P. S., Meiswinkel, R., Baylis, M. & Kelly, P. J. Prevalence of Culicoides imicola and other species (Diptera: Ceratopogonidae) ateight sites in Zimbabwe: To the editor. J. S. Afr. Vet. Assoc. 72, 62–63 (2001).CAS 
PubMed 
Article 

Google Scholar 
Meiswinkel, R. The 1996 outbreak of African horse sickness in South Africa—the entomological perspective. Arch. Virol. Suppl. 14, 69–83 (1998).CAS 
PubMed 

Google Scholar 
Jean Pierre, T. et al. Characteristics, classification and genesis of vertisols under seasonally contrasted climate in the Lake Chad Basin, Central Africa. J. Afr. Earth Sci. 150, 176–193 (2019).ADS 
CAS 
Article 

Google Scholar 
Elias, E. Characteristics of Nitisol profiles as affected by land use type and slope class in some Ethiopian highlands. Environ. Syst. Res. 6, 1–15 (2017).Article 

Google Scholar 
Nachtergaele, F. The classification of leptosols in the world reference base for soil resources.Veronesi, E., Venter, G. J., Labuschagne, K., Mellor, P. S. & Carpenter, S. Life-history parameters of Culicoides (Avaritia) imicola Kieffer in the laboratory at different rearing temperatures. Vet. Parasitol. 163, 370–373 (2009).CAS 
PubMed 
Article 

Google Scholar 
Verhoef, F. A. A., Venter, G. J. & Weldon, C. W. Thermal limits of two biting midges, Culicoides imicola Kieffer and C. bolitinos Meiswinkel (Diptera: Ceratopogonidae). Parasites Vectors 7, 384 (2014).PubMed 
PubMed Central 
Article 

Google Scholar 
Conte, A., Goffredo, M., Ippoliti, C. & Meiswinkel, R. Influence of biotic and abiotic factors on the distribution and abundance of Culicoides imicola and the Obsoletus Complex in Italy. Vet. Parasitol. 150, 333–344 (2007).CAS 
PubMed 
Article 

Google Scholar 
Martinez-de la Puente, J., Navarro, J., Ferraguti, M., Soriguer, R. & Figuerola, J. First molecular identification of the vertebrate hosts of Culicoides imicola in Europe and a review of its blood-feeding patterns worldwide: Implications for the transmission of bluetongue disease and African horse sickness. Med. Vet. Entomol. 31, 333–339 (2017).CAS 
PubMed 
Article 

Google Scholar 
Purse, B. V. et al. Impacts of climate, host and landscape factors on Culicoides species in Scotland. Med. Vet. Entomol. 26, 168–177 (2012).CAS 
PubMed 
Article 

Google Scholar 
Leta, S. et al. Updating the global occurrence of Culicoides imicola, a vector for emerging viral diseases. Sci. Data 6, 1–8 (2019).CAS 
Article 

Google Scholar  More

Naef-Daenzer, B. Patch time allocation and patch sampling by foraging great and blue tits. Anim. Behav. 59, 989–999 (2000).CAS 
PubMed 
Article 

Google Scholar 
Kotler, B. P., Brown, J. S. & Bouskila, A. Apprehension and time allocation in gerbils: The effects of predatory risk and energetic state. Ecology 85, 917–922 (2004).Article 

Google Scholar 
Wajnberg, E., Bernhard, P., Hamelin, F. & Boivin, G. Optimal patch time allocation for time-limited foragers. Behav. Ecol. Sociobiol. 60, 1–10 (2006).Article 

Google Scholar 
Embar, K., Kotler, B. P. & Mukherjee, S. Risk management in optimal foragers: The effect of sightlines and predator type on patch use, time allocation, and vigilance in gerbils. Oikos 120, 1657–1666 (2011).Article 

Google Scholar 
Lima, S. L. & Bednekoff, P. A. Temporal variation in danger drives antipredator behavior: The predation risk allocation hypothesis. Am. Nat. 153, 649–659 (1999).PubMed 
Article 

Google Scholar 
Beauchamp, G. & Ruxton, G. D. A reassessment of the predation risk allocation hypothesis: A comment on Lima and Bednekoff. Am. Nat. 177, 143–146 (2011).PubMed 
Article 

Google Scholar 
Ferrari, M. C. O., Sih, A. & Chivers, D. P. The paradox of risk allocation: A review and prospectus. Anim. Behav. 78, 579–585 (2009).Article 

Google Scholar 
Wolf, L. L. & Hainsworth, F. R. Foraging efficiencies and time budgets in nectar-feeding birds. Ecology 56, 117–128 (1975).Article 

Google Scholar 
Litzow, M. A. & Piatt, J. F. Variance in prey abundance influences time budgets of breeding seabirds: Evidence from pigeon guillemots Cepphus columba. J. Avian Biol. 34, 54–64 (2003).Article 

Google Scholar 
Rishworth, G. M., Tremblay, Y. & Green, D. B. Drivers of time-activity budget variability during breeding in a pelagic seabird. PLoS One 9, e116544 (2014).ADS 
PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Stephens, D. W., Brown, J. S. & Ydenberg, R. C. Foraging: Behavior and Ecology. (The University of Chicago Press, 2007).Orians, G. & Pearson, N. On the theory of central place foraging. In Analysis of Ecological Systems (eds. Horn, D., Mitchell, R. & Stairs, G.) 154–177 (The Ohio State University Press, 1979).Chaurand, T. & Weimerskirch, H. The regular alternation of short and long foraging trips in the blue petrel Halobaena caerulea: A previously undescribed strategy of food provisioning in a pelagic seabird. J. Anim. Ecol. 63, 275–282 (1994).Article 

Google Scholar 
Weimerskirch, H. et al. Alternate long and short foraging trips in pelagic seabird parents. Anim. Behav. 47, 472–476 (1994).Article 

Google Scholar 
Welcker, J., Beiersdorf, A., Varpe, Ø. & Steen, H. Mass fluctuations suggest different functions of bimodal foraging trips in a central-place forager. Behav. Ecol. 23, 1372–1378 (2012).Article 

Google Scholar 
Welcker, J. et al. Flexibility in the bimodal foraging strategy of a high Arctic alcid, the little auk Alle alle. J. Avian Biol. 40, 388–399 (2009).Article 

Google Scholar 
Jakubas, D., Wojczulanis-Jakubas, K., Iliszko, L. M. & Kidawa, D. Flexibility of little auks foraging in various oceanographic features in a changing Arctic. Sci. Rep. https://doi.org/10.1038/s41598-020-65210-x (2020).Article 
PubMed 
PubMed Central 

Google Scholar 
Shoji, A. et al. Dual foraging and pair coordination during chick provisioning by Manx shearwaters: Empirical evidence supported by a simple model. J. Exp. Biol. 218, 2116–2123 (2015).PubMed 
PubMed Central 

Google Scholar 
Phillips, R. A., Wakefield, E. D., Croxall, J. P., Fukuda, A. & Higuchi, H. Albatross foraging behaviour: No evidence for dual foraging, and limited support for anticipatory regulation of provisioning at South Georgia. Mar. Ecol. Prog. Ser. 391, 279–292 (2009).ADS 
Article 

Google Scholar 
Brown, Z. W., Welcker, J., Harding, A. M. A., Walkusz, W. & Karnovsky, N. J. Divergent diving behavior during short and long trips of a bimodal forager, the little auk Alle alle. J. Avian Biol. 43, 215–226 (2012).Article 

Google Scholar 
Baduini, C. L. & Hyrenbach, K. D. Biogeography of procellariiform foraging strategies: Does ocean productivity influence provisioning?. Mar. Ornithol. 31, 101–112 (2003).
Google Scholar 
Navarro, J. & González-Solís, J. Environmental determinants of foraging strategies in Cory’s shearwaters Calonectris diomedea. Mar. Ecol. Prog. Ser. 378, 259–267 (2009).ADS 
CAS 
Article 

Google Scholar 
Ochi, D., Oka, N. & Watanuki, Y. Foraging trip decisions by the streaked shearwater Calonectris leucomelas depend on both parental and chick state. J. Ethol. 28, 313–321 (2010).Article 

Google Scholar 
Congdon, B. C., Krockenberger, A. K. & Smithers, B. V. Dual-foraging and co-ordinated provisioning in a tropical Procellariiform, the wedge-tailed shearwater. Mar. Ecol. Prog. Ser. 301, 293–301 (2005).ADS 
Article 

Google Scholar 
Peck, D. R. & Congdon, B. C. Colony-specific foraging behaviour and co-ordinated divergence of chick development in the wedge-tailed shearwater Puffinus pacificus. Mar. Ecol. Prog. Ser. 299, 289–296 (2005).ADS 
Article 

Google Scholar 
Weimerskirch, H. How can a pelagic seabird provision its chick when relying on a distant food resource? Cyclic attendance at the colony, foraging decision and body condition in sooty shearwaters. J. Anim. Ecol. 67, 99–109 (1998).Article 

Google Scholar 
Stempniewicz, L. BWP update. Little Auk (Alle alle). J. Birds West. Palearct. 3, 175–201 (2001).
Google Scholar 
Wojczulanis-Jakubas, K. & Jakubas, D. When and why does my mother leave me? The question of brood desertion in the Dovekie (Alle Alle). Auk 129, 632–637 (2012).Article 

Google Scholar 
Harding, A. M. A., Van Pelt, T. I., Lifjeld, J. T. & Mehlum, F. Sex differences in little auk Alle alle parental care: Transition from biparental to paternal-only care. Ibis (Lond. 1859). 146, 642–651 (2004).Article 

Google Scholar 
Wojczulanis-Jakubas, K. et al. Duration of female parental care and their survival in the little auk Alle alle—Are these two traits linked ?. Behav. Ecol. Sociobiol. 74, 1–11 (2020).Article 

Google Scholar 
Wojczulanis, K., Dariusz, J. & Lech, S. The Little Auk Alle alle: An ecological indicator of a changing Arctic and a model organism. Polar Biol. https://doi.org/10.1007/s00300-021-02981-7 (2021).Article 

Google Scholar 
Steen, H., Vogedes, D., Broms, F., Falk-Petersen, S. & Berge, J. Little auks (Alle alle) breeding in a High Arctic fjord system: Bimodal foraging strategies as a response to poor food quality?. Polar Res. 26, 118–125 (2007).Article 

Google Scholar 
Wojczulanis-Jakubas, K., Jakubas, D., Karnovsky, N. J. & Walkusz, W. Foraging strategy of little auks under divergent conditions on feeding grounds. Polar Res. 29, 22–29 (2010).Article 

Google Scholar 
Jakubas, D., Wojczulanis-Jakubas, K., Iliszko, L., Darecki, M. & Stempniewicz, L. Foraging strategy of the little auk Alle alle throughout breeding season—switch from unimodal to bimodal pattern. J. Avian Biol. 45, 551–560 (2014).Article 

Google Scholar 
Jakubas, D., Iliszko, L., Wojczulanis-Jakubas, K. & Stempniewicz, L. Foraging by little auks in the distant marginal sea ice zone during the chick-rearing period. Polar Biol. 35, 73–81 (2012).Article 

Google Scholar 
Jakubas, D. et al. Intra-seasonal variation in zooplankton availability, chick diet and breeding performance of a high Arctic planktivorous seabird. Polar Biol. 391, 1547–1561 (2016).Article 

Google Scholar 
Jakubas, D. et al. Foraging closer to the colony leads to faster growth in little auks. Mar. Ecol. Prog. Ser. 489, 263–278 (2013).ADS 
Article 

Google Scholar 
Stempniewicz, L. Predator-prey interactions between Glaucous Gull Larus hyperboreus and Little Auk Alle alle in Spitsbergen. Acta Ornithol. 29, 155–170 (1995).
Google Scholar 
Wojczulanis-Jakubas, K., Jakubas, D. & Stempniewicz, L. Changes in the glaucous gull predatory pressure on little auks in Southwest Spitsbergen. Waterbirds 28, 430–435 (2005).Article 

Google Scholar 
Kharitonov, S. Methods and Theoretical Aspects of Seabird Studies. (Proc 5 All-Russian Mar Biol School, Marine Biological Institute, 2007).Wojczulanis-Jakubas, K., Jakubas, D. & Stempniewicz, L. Avifauna of Hornsund area, SW Spitsbergen: Present state and recent changes. Polish Polar Res. 29, 187–197 (2008).
Google Scholar 
Keslinka, K. L., Wojczulanis-Jakubas, K., Jakubas, D. & Neubauer, G. Determinants of the little auk (Alle alle) breeding colony location and size in W and NW coast of Spitsbergen. PLoS One 14, 1–20 (2019).
Google Scholar 
Kidawa, D., Barcikowski, M. & Palme, R. Parent-offspring interactions in a long-lived seabird, the Little Auk (Alle alle): Begging and provisioning under simulated stress. J. Ornithol. 158, 145–157 (2017).Article 

Google Scholar 
Welcker, J., Beiersdorf, A., Varpe, Ø. & Steen, H. Mass fluctuations suggest different functions of bimodal foraging trips in a central-place forager. Behav. Ecol. https://doi.org/10.1093/beheco/ars131 (2012).Article 

Google Scholar 
Jakubas, D. & Wojczulanis, K. Predicting the sex of Dovekies by discriminant analysis. Waterbirds 30, 92–96 (2007).Article 

Google Scholar 
Grissot, A. et al. Parental coordination of chick provisioning in a planktivorous arctic seabird under divergent conditions on foraging grounds. Front. Ecol. Evol. 7, 349 (2019).Article 

Google Scholar 
Stoffel, M. A., Nakagawa, S. & Schielzeth, H. rptR: Repeatability estimation and variance decomposition by generalized linear mixed-effects models. Methods Ecol. Evol. 8, 1639–1644 (2017).Article 

Google Scholar 
R Core Team. R: A Language and Environment for Statistical Computing. R. (2019).Wojczulanis-Jakubas, K., Jakubas, D. & Stempniewicz, L. Sex-specific parental care by incubating Little Auks (Alle alle). Ornis Fenn. 86, 140–148 (2009).
Google Scholar 
Welcker, J., Steen, H., Harding, A. M. A. & Gabrielsen, G. W. Sex-specific provisioning behaviour in a monomorphic seabird with a bimodal foraging strategy. Ibis (Lond. 1859). 151, 502–513 (2009).Article 

Google Scholar 
Kidawa, D. et al. Parental efforts of an Arctic seabird, the little auk Alle alle under variable foraging conditions. Mar. Biol. Res. 11, 349–360 (2015).Article 

Google Scholar 
Wickham, H. Hadley Wickham. Media 35, 211 (2009).
Google Scholar 
Karnovsky, N. J. et al. Inter-colony comparison of diving behavior of an Arctic top predator: Implications for warming in the Greenland Sea. Mar. Ecol. Prog. Ser. 440, 229–240 (2011).ADS 
Article 

Google Scholar 
Karnovsky, N. et al. Foraging distributions of little auks Alle alle across the Greenland Sea: Implications of present and future Arctic climate change. Mar. Ecol. Prog. Ser. 415, 283–293 (2010).ADS 
Article 

Google Scholar 
Gremillet, D. et al. Little auks buffer the impact of current Arctic climate change. Mar. Ecol. Prog. Ser. 454, 197–206 (2012).ADS 
Article 

Google Scholar 
Harding, A. M. A. et al. Flexibility in the parental effort of an Arctic-breeding seabird. Funct. Ecol. 23, 348–358 (2009).Article 

Google Scholar 
Jakubas, D. et al. Foraging effort does not influence body condition and stress level in little auks. Mar. Ecol. Prog. Ser. 432, 277–290 (2011).ADS 
Article 

Google Scholar 
Jakubas, D., Wojczulanis-Jakubas, K., Iliszko, L. M., Strøm, H. & Stempniewicz, L. Habitat foraging niche of a High Arctic zooplanktivorous seabird in a changing environment. Sci. Rep. 7, 1–14 (2017).CAS 
Article 

Google Scholar  More

Overview of hydrologic and ecological mapping protocolMapping hydrologic and ecological alteration at the stream reach level followed a 7-step process that builds upon several previously published methods (Fig. 1). The steps include: (1) compiling a nationwide dataset of streamflow gauges from the US Geological Survey (USGS) and distinguishing reference and non-reference gages and associated records21,22,23, (2) assembling stream flow records and calculating hydrologic indices23, (3) quantifying hydrologic alteration for stream gages22, (4) developing models to predict hydrologic alteration from human disturbance variables24, (5) using models to extrapolate hydrologic alteration to ungauged stream reaches24, (6) developing empirical models of fish species richness responses to hydrologic alteration17, and (7) mapping fish richness responses to ungauged stream reaches based on modeled estimates of hydrologic alteration. Methodological details are provided in each of the publications cited above; however, an overview of the steps is provided here. We elaborate more fully on the detailed methodology starting at step 3, as this reflects more of the focus of the technical validation of the dataset (Fig. 1).Fig. 1Overview of the 7-step approach used to map hydrologic alteration and ecological consequences in stream reaches of the conterminous US.Full size imageStep 1 – Compiling a nationwide streamflow datasetWe assembled streamflow information for 7,088 USGS stream gages with at least 15 years of daily discharge data as of 2010. We only included gages with at least 15 years of complete annual records (i.e., those with More

Amesbury, M. J., Gallego-Sala, A. & Loisel, J. Nat. Geosci. 12, 880–883 (2019).CAS 
Article 

Google Scholar 
Friedlingstein, P. et al. Earth Syst. Sci. Data 14, 1917–2005 (2022).Article 

Google Scholar 
Helbig, M. et al. Nat. Clim. Change https://doi.org/10.1038/s41558-022-01428-z (2022).Article 

Google Scholar 
Morris, P. J. Nat. Clim. Change 11, 560–562 (2021).Article 

Google Scholar 
Huang, Y. et al. Nat. Clim. Change 11, 618–622 (2021).CAS 
Article 

Google Scholar 
Laine, A. M. et al. Glob. Change Biol. 25, 1995–2008 (2019).Article 

Google Scholar 
Hanson, P. J. et al. AGU Adv. 1, e2020AV000163 (2020).Article 

Google Scholar 
Aurela, M., Laurila, T. & Tuovinen, J.-P. Geophys. Res. Lett. 31, L16119 (2004).Article 

Google Scholar 
Rinne, J. et al. Phil. Trans. R. Soc. B 375, 20190517 (2020).CAS 
Article 

Google Scholar 
Xia, J. et al. Nat. Geosci. 7, 173–180 (2014).CAS 
Article 

Google Scholar 
Tang, R. et al. Nat. Clim. Change 12, 380–385 (2022).CAS 
Article 

Google Scholar  More

Lindgren, A., Hugelius, G. & Kuhry, P. Extensive loss of past permafrost carbon but a net accumulation into present-day soils. Nature 560, 219–222 (2018).Article 

Google Scholar 
Nichols, J. E. & Peteet, D. M. Rapid expansion of northern peatlands and doubled estimate of carbon storage. Nat. Geosci. 12, 917–921 (2019).Article 

Google Scholar 
Bridgham, S. D. et al. The carbon balance of North American wetlands. Wetlands 26, 889–916 (2006).Article 

Google Scholar 
Dixon, M. J. R. et al. Tracking global change in ecosystem area: the wetland extent trends index. Biol. Conserv. 193, 27–35 (2016).Article 

Google Scholar 
Darrah, S. E. et al. Improvements to the Wetland Extent Trends (WET) index as a tool for monitoring natural and human-made wetlands. Ecol. Indic. 99, 294–298 (2019).Article 

Google Scholar 
Asselen, S. et al. Drivers of wetland conversion: a global meta-analysis. PLoS ONE 8, e81292 (2013).Article 

Google Scholar 
Davidson, N. C. How much wetland has the world lost? Long-term and recent trends in global wetland area. Mar. Freshw. Res. 65, 934–941 (2014).Article 

Google Scholar 
Galatowitsch, S. M. in The Wetland Book II: Distribution, Description, and Conservation (eds Finlayson, C.M. et al.) 359–367 (Springer, 2018).Limpert, K. E. et al. Reducing emissions from degraded floodplain wetlands. Front. Environ. Sci. 8, 8 (2020); https://doi.org/10.3389/fenvs.2020.00008Laine, J. et al. Effect of water-level drawdown on global climatic warming: northern peatlands. AMBIO 25, 179–184 (1996).
Google Scholar 
Ise, T. et al. High sensitivity of peat decomposition to climate change through water-table feedback. Nat. Geosci. 1, 763–766 (2008).Article 

Google Scholar 
Saunois, M. et al. The global methane budget 2000–2017. Earth. Syst. Sci. Data 12, 1561–1623 (2020).Article 

Google Scholar 
Leifeld, J. et al. Intact and managed peatland soils as a source and sink of GHGs from 1850 to 2100. Nat. Clim. Change 9, 945–947 (2019).Article 

Google Scholar 
Günther, A. et al. Prompt rewetting of drained peatlands reduces climate warming despite methane emissions. Nat. Commun. 11, 1644 (2020).Article 

Google Scholar 
Hooijer, A. et al. Subsidence and carbon loss in drained tropical peatlands. Biogeoscience 9, 1053–1071 (2012).Article 

Google Scholar 
Prananto, J. A. et al. Drainage increases CO2 and N2O emissions from tropical peat soils. Glob. Change Biol. 26, 4583–4600 (2020).Article 

Google Scholar 
Jauhiainen, J. et al. Carbon dioxide and methane fluxes in drained tropical peat before and after hydrological restoration. Ecology 89, 3503–3514 (2008).Article 

Google Scholar 
Bridgham, S. D. et al. Methane emissions from wetlands: biogeochemical, microbial, and modeling perspectives from local to global scales. Glob. Change Biol. 19, 1325–1346 (2013).Article 

Google Scholar 
Schuldt, R. et al. Modelling Holocene carbon accumulation and methane emissions of boreal wetlands—an Earth system model approach. Biogeosciences 10, 1659–1674 (2012).Article 

Google Scholar 
McNicol, G. et al. Effects of seasonality, transport pathway, and spatial structure on greenhouse gas fluxes in a restored wetland. Glob. Change Biol. 23, 2768–2782 (2017).Article 

Google Scholar 
Yu, K. et al. Redox window with minimum global warming potential contribution from rice soils. Soil Sci. Soc. Am. J. 68, 2086–2091 (2004).Article 

Google Scholar 
Huang, Y. et al. Tradeoff of CO2 and CH4 emissions from global peatlands under water-table drawdown. Nat. Clim. Change 11, 618–622 (2021).Article 

Google Scholar 
Ojanen, P. & Minkkinen, K. Rewetting offers rapid climate benefits for tropical and agricultural peatlands but not for forestry‐drained peatlands. Glob. Biogeochem. Cycles 34, e2019GB006503 (2020).Article 

Google Scholar 
Evans, C. D. et al. Overriding water table control on managed peatland greenhouse gas emissions. Nature 593, 548–552 (2021).
Google Scholar 
Strack, M., Keith, A. M. & Xu, B. Growing season carbon dioxide and methane exchange at a restored peatland on the Western Boreal Plain. Ecol. Eng. 64, 231–239 (2014).Article 

Google Scholar 
Karki, S. et al. Carbon balance of rewetted and drained peat soils used for biomass production: a mesocosm study. Glob. Change Biol. Bioenergy 8, 969–980 (2016).Article 

Google Scholar 
Whiting, G. J. & Chanton, J. P. Greenhouse carbon balance of wetlands: methane emission versus carbon sequestration. Tellus B 53, 521–528 (2001).
Google Scholar 
Moore, T. R. et al. A multi-year record of methane flux at the Mer Bleue Bog, Southern Canada. Ecosystems 14, 646–657 (2011).Article 

Google Scholar 
Zhu, X. et al. Ammonia oxidation pathways and nitrifier denitrification are significant sources of N2O and NO under low oxygen availability. Proc. Natl Acad. Sci. USA 110, 6328–6333 (2013).Article 

Google Scholar 
Cole, J. J. et al. Plumbing the global carbon cycle: integrating inland waters into the terrestrial carbon budget. Ecosystems 10, 171–184 (2007).Article 

Google Scholar 
Holgerson, M. A. & Raymond, P. A. Large contribution to inland water CO2 and CH4 emissions from very small ponds. Nat. Geosci. 9, 222–226 (2016).Article 

Google Scholar 
Raymond, P. A. et al. Global carbon dioxide emissions from inland waters. Nature 503, 355–359 (2013).Article 

Google Scholar 
Rosentreter, J. A. et al. Half of global methane emissions come from highly variable aquatic ecosystem sources. Nat. Geosci. 14, 225–230 (2021).Article 

Google Scholar 
Lehner, B. & Döll, P. Development and validation of a global database of lakes, reservoirs and wetlands. J. Hydrol. 296, 1–22 (2004).Article 

Google Scholar 
Schuur, E. A. et al. The effect of permafrost thaw on old carbon release and net carbon exchange from tundra. Nature 459, 556–559 (2009).Article 

Google Scholar 
Delgado-Baquerizo, M. et al. Climate legacies drive global soil carbon stocks in terrestrial ecosystems. Sci. Adv. 3, e1602008 (2017).Article 

Google Scholar 
Hengl, T. et al. SoilGrids250m: global gridded soil information based on machine learning. PLoS ONE 12, e0169748 (2017).Article 

Google Scholar 
Walker, X. J. et al. Increasing wildfires threaten historic carbon sink of boreal forest soils. Nature 572, 520–523 (2019).Article 

Google Scholar 
Baird, A. J. et al. Validity of managing peatlands with fire. Nat. Geosci. 12, 884–885 (2019).Article 

Google Scholar 
Ritchie, H., Roser, M. & Rosado, P. CO2 and GHG Emissions: Atmospheric Concentrations (Our World in Data, 2020); https://ourworldindata.org/atmospheric-concentrations#citationFriedlingstein, P. et al. Global carbon budget 2019. Earth Syst. Sci. Data 11, 1783–1838 (2019).Article 

Google Scholar 
Tian, H. et al. A comprehensive quantification of global nitrous oxide sources and sinks. Nature 586, 248–256 (2020).Article 

Google Scholar 
Cook-Patton, S. C. et al. Mapping carbon accumulation potential from global natural forest regrowth. Nature 585, 545–550 (2020).Article 

Google Scholar 
Jaenicke, J. et al. Planning hydrological restoration of peatlands in Indonesia to mitigate carbon dioxide emissions. Mitig. Adapt. Strateg. Glob. Change 15, 223–239 (2010).Article 

Google Scholar 
Wohl, E. Landscape-scale carbon storage associated with beaver dams. Geophys. Res. Lett. 40, 3631–3636 (2013).Article 

Google Scholar 
Law, A. et al. Using ecosystem engineers as tools in habitat restoration and rewilding: beaver and wetlands. Sci. Total Environ. 605–606, 1021–1030 (2017).Article 

Google Scholar 
Brown, L. E. et al. Macroinvertebrate community assembly in pools created during peatland restoration. Sci. Total Environ. 569, 361–372 (2016).Article 

Google Scholar 
Finlayson, C. M. & Rea, N. Reasons for the loss and degradation of Australian wetlands. Wetl. Ecol. Manage. 7, 1–11 (1999).Article 

Google Scholar 
Liu, J. et al. Water conservancy projects in China: achievements, challenges and way forward. Glob. Environ. Change 23, 633–643 (2013).Article 

Google Scholar 
Rogelj, J. et al. in Special Report on Global Warming of 1.5 °C (eds Masson-Delmotte, V. et al.) Ch. 2 (IPCC, WMO, 2018).Svensson, B. H. & Rosswall, T. In situ methane production from acid peat in plant communities with different moisture regimes in a subarctic mire. Oikos 43, 341–350 (1984).Article 

Google Scholar 
Waddington, J. M. & Roulet, N. T. Atmosphere–wetland carbon exchanges: scale dependency of CO2 and CH4 exchange on the developmental topography of a peatland. Glob. Biogeochem. Cycles 10, 233–245 (1996).Article 

Google Scholar 
Kling, G. W. et al. The flux of CO2 and CH4 from lakes and rivers in Arctic Alaska. Hydrobiologia 240, 23–36 (1992).Article 

Google Scholar 
Humphreys, E. R. et al. Two bogs in the Canadian Hudson Bay lowlands and a temperate bog reveal similar annual net ecosystem exchange of CO2. Arct. Antarct. Alp. Res. 46, 103–113 (2014).Article 

Google Scholar 
Caffrey, J. M. Factors controlling net ecosystem metabolism in US estuaries. Estuaries 27, 90–101 (2004).Article 

Google Scholar 
Roberts, B. J. et al. Multiple scales of temporal variability in ecosystem metabolism rates: results from 2 years of continuous monitoring in a forested headwater stream. Ecosystems 10, 588–606 (2007).Article 

Google Scholar 
Myhre, G. et al. in Climate Change 2013: The Physical Science Basis (eds Stocker, T.F. et al.) 710–714 (Cambridge Univ. Press, 2013).Glenn, A. J. et al. Comparison of net ecosystem CO2 exchange in two peatlands in western Canada with contrasting dominant vegetation, Sphagnum and Carex. Agric. For. Meteorol. 140, 115–135 (2006).Article 

Google Scholar 
Bond-Lamberty, B. & Thomson, A. Temperature-associated increases in the global soil respiration record. Nature 464, 579–582 (2010).Article 

Google Scholar 
Zhao, J. et al. Intensified inundation shifts a freshwater wetland from a CO2 sink to a source. Glob. Change Biol. 25, 3319–3333 (2019).Article 

Google Scholar 
Peichl, M. et al. A 12-year record reveals pre-growing season temperature and water table level threshold effects on the net carbon dioxide exchange in a boreal fen. Environ. Res. Lett. 9, 55006 (2014).Article 

Google Scholar 
Peng, Z. & Peng, G. Suitability mapping of global wetland areas and validation with remotely sensed data. Sci. China Earth Sci. 57, 2883–2892 (2014).
Google Scholar 
Zhang, B. et al. Methane emissions from global wetlands: an assessment of the uncertainty associated with various wetland extent data sets. Atmos. Environ. 165, 310–321 (2017).Article 

Google Scholar 
Gumbricht, T. et al. An expert system model for mapping tropical wetlands and peatlands reveals South America as the largest contributor. Glob. Change Biol. 23, 3581–3599 (2017).Article 

Google Scholar 
ERA5 Monthly Averaged Data on Pressure Levels from 1979 to Present (ECMWF, 2020); https://doi.org/10.24381/cds.6860a573FAOSTAT Emissions Database (FAO, 2020); http://www.fao.org/faostat/en/#data/GTQiu, C. et al. Large historical carbon emissions from cultivated northern peatlands. Sci. Adv. 7, eabf1332 (2021).Article 

Google Scholar 
Frolking, S., Roulet, N. & Fuglestvedt, J. How northern peatlands influence the Earth’s radiative budget: sustained methane emission versus sustained carbon sequestration. J. Geophys. Res. Biogeosci. 111, G01008 (2006).
Google Scholar 
Neubauer, S. C. & Megonigal, J. P. Moving beyond global warming potentials to quantify the climatic role of ecosystems. Ecosystems 18, 1000–1013 (2015).Article 

Google Scholar 
Matthews, E. & Fung, I. Methane emission from natural wetlands: global distribution, area, and environmental characteristics of sources. Glob. Biogeochem. Cycles 1, 61–86 (1987).Article 

Google Scholar 
Melton, J. R. et al. Present state of global wetland extent and wetland methane modelling: conclusions from a model inter-comparison project (WETCHIMP). Biogeosciences 10, 753–788 (2013).Article 

Google Scholar 
Papa, F. et al. Interannual variability of surface water extent at the global scale, 1993–2004. J. Geophys. Res. Atmos. 115, D12111 (2010).Article 

Google Scholar 
Junk, W. J. et al. Current state of knowledge regarding the world’s wetlands and their future under global climate change: a synthesis. Aquat. Sci. 75, 151–167 (2013).Article 

Google Scholar 
Schroeder, R. et al. Development and evaluation of a multi-year fractional surface water data set derived from active/passive microwave remote sensing data. Remote Sens. 7, 16688–16732 (2015).Article 

Google Scholar 
Vanessa, R. et al. A global assessment of inland wetland conservation status. Bioscience 6, 523–533 (2017).
Google Scholar 
Davidson, N. et al. Global extent and distribution of wetlands: trends and issues. Mar. Freshw. Res. 69, 620–627 (2018).Article 

Google Scholar 
ArcWorld 1:3 M. Continental Coverage (ESRI, 1992); http://www.oceansatlas.org/subtopic/en/c/593/Digital Chart of the World 1:1 M (ESRI, 1993); https://www.ngdc.noaa.gov/mgg/topo/report/s5/s5Avii.htmlGlobal Wetlands (UNEP-WCMC, 1993); https://www.arcgis.com/home/item.html?id=105a402642e146eaa665315279a322d1Moreno-Mateos, D. et al. Structural and functional loss in restored wetland ecosystems. PLoS Biol. 10, e1001247 (2012).Article 

Google Scholar 
Ramsar COP12 DOC.8 Report of the Secretary General to COP12 on the Implementation of the Convention (Ramsar Convention Secretariat, 2015).Page, S. E. et al. Peatlands and global change: response and resilience. Annu. Rev. Environ. Resour. 41, 35–57 (2016).Article 

Google Scholar 
Swindles, G. T. et al. Widespread drying of European peatlands in recent centuries. Nat. Geosci. 12, 922–928 (2019).Article 

Google Scholar  More

Xia, J. et al. Terrestrial carbon cycle affected by non-uniform climate warming. Nat. Geosci. 7, 173–180 (2014).CAS 
Article 

Google Scholar 
Tang, R. et al. Increasing terrestrial ecosystem carbon release in response to autumn cooling and warming. Nat. Clim. Change 12, 380–385 (2022).CAS 
Article 

Google Scholar 
Hugelius, G. et al. Large stocks of peatland carbon and nitrogen are vulnerable to permafrost thaw. Proc. Natl Acad. Sci. USA 117, 20438–20446 (2020).CAS 
Article 

Google Scholar 
Gallego-Sala, A. V. et al. Latitudinal limits to the predicted increase of the peatland carbon sink with warming. Nat. Clim. Change 8, 907–913 (2018).CAS 
Article 

Google Scholar 
Treat, C. C. et al. Widespread global peatland establishment and persistence over the last 130,000 y. Proc. Natl Acad. Sci. USA 116, 4822–4827 (2019).CAS 
Article 

Google Scholar 
Frolking, S., Roulet, N. & Fuglestvedt, J. How northern peatlands influence the Earth’s radiative budget: sustained methane emission versus sustained carbon sequestration. J. Geophys. Res. Biogeosci. 111, G01008 (2006).
Google Scholar 
Loisel, J. et al. Expert assessment of future vulnerability of the global peatland carbon sink. Nat. Clim. Change 11, 70–77 (2021).Article 

Google Scholar 
Helbig, M. et al. Direct and indirect climate change effects on carbon dioxide fluxes in a thawing boreal forest–wetland landscape. Glob. Change Biol. 23, 3231–3248 (2017).Article 

Google Scholar 
Koebsch, F. et al. Refining the role of phenology in regulating gross ecosystem productivity across European peatlands. Glob. Change Biol. 26, 876–887 (2020).Article 

Google Scholar 
Huang, Y. et al. Tradeoff of CO2 and CH4 emissions from global peatlands under water-table drawdown. Nat. Clim. Change 11, 618–622 (2021).CAS 
Article 

Google Scholar 
Evans, C. D. et al. Overriding water table control on managed peatland greenhouse gas emissions. Nature 593, 548–552 (2021).CAS 

Google Scholar 
Helfter, C. et al. Drivers of long-term variability in CO2 net ecosystem exchange in a temperate peatland. Biogeosciences 12, 1799–1811 (2015).Article 

Google Scholar 
Järveoja, J., Nilsson, M. B., Gažovič, M., Crill, P. M. & Peichl, M. Partitioning of the net CO2 exchange using an automated chamber system reveals plant phenology as key control of production and respiration fluxes in a boreal peatland. Glob. Change Biol. 24, 3436–3451 (2018).Article 

Google Scholar 
Mäkiranta, P. et al. Responses of phenology and biomass production of boreal fens to climate warming under different water-table level regimes. Glob. Change Biol. 24, 944–956 (2018).Article 

Google Scholar 
Li, Q. et al. Abiotic and biotic drivers of microbial respiration in peat and its sensitivity to temperature change. Soil Biol. Biochem. 153, 108077 (2021).CAS 
Article 

Google Scholar 
Moore, T. R. et al. Spring photosynthesis in a cool temperate bog. Glob. Change Biol. 12, 2323–2335 (2006).Article 

Google Scholar 
Korrensalo, A. et al. Species-specific temporal variation in photosynthesis as a moderator of peatland carbon sequestration. Biogeosciences 14, 257–269 (2017).CAS 
Article 

Google Scholar 
Weltzin, J. F. et al. Response of bog and fen plant communities to warming and water-table manipulations. Ecology 81, 3464–3478 (2000).Article 

Google Scholar 
Dimitrov, D. D., Grant, R. F., Lafleur, P. M. & Humphreys, E. R. Modeling the effects of hydrology on gross primary productivity and net ecosystem productivity at Mer Bleue bog. J. Geophys. Res. Biogeosci. 116, G04010 (2011).Article 
CAS 

Google Scholar 
Bubier, J., Crill, P., Mosedale, A., Frolking, S. & Linder, E. Peatland responses to varying interannual moisture conditions as measured by automatic CO2 chambers. Glob. Biogeochem. Cycles 17, 1066 (2003).Article 
CAS 

Google Scholar 
Moore, T. R. & Knowles, R. The influence of water table levels on methane and carbon dioxide emissions from peatland soils. Can. J. Soil Sci. 69, 33–38 (1989).CAS 
Article 

Google Scholar 
Nichols, D. S. Temperature of upland and peatland soils in a north central Minnesota forest. Can. J. Soil Sci. 78, 493–509 (1998).Article 

Google Scholar 
Bellisario, L. M., Moore, T. R. & Bubier, J. L. Net ecosystem CO2 exchange in a boreal peatland, northern Manitoba. Écoscience 5, 534–541 (1998).Article 

Google Scholar 
Yu, Z. et al. Peatlands and their role in the global carbon cycle. Eos 92, 97–98 (2011).Article 

Google Scholar 
Hanson, P. J. et al. Rapid net carbon loss from a whole-ecosystem warmed peatland. AGU Adv. 1, e2020AV000163 (2020).Article 

Google Scholar 
Vincent, L. A. et al. Observed trends in Canada’s climate and influence of low-frequency variability modes. J. Clim. 28, 4545–4560 (2015).Article 

Google Scholar 
Templer, P. H. et al. Climate Change Across Seasons Experiment (CCASE): a new method for simulating future climate in seasonally snow-covered ecosystems. PLoS ONE 12, e0171928 (2017).Article 
CAS 

Google Scholar 
Peichl, M. et al. A 12-year record reveals pre-growing season temperature and water table level threshold effects on the net carbon dioxide exchange in a boreal fen. Environ. Res. Lett. 9, 055006 (2014).Article 

Google Scholar 
Helbig, M., Humphreys, E. R. & Todd, A. Contrasting temperature sensitivity of CO2 exchange in peatlands of the Hudson Bay Lowlands, Canada. J. Geophys. Res. Biogeosci. 124, 2126–2143 (2019).CAS 
Article 

Google Scholar 
Griffis, T. J., Rouse, W. R. & Waddington, J. M. Interannual variability of net ecosystem CO2 exchange at a subarctic fen. Glob. Biogeochem. Cycles 14, 1109–1121 (2000).CAS 
Article 

Google Scholar 
Bubier, J. L., Crill, P. M., Moore, T. R., Savage, K. & Varner, R. K. Seasonal patterns and controls on net ecosystem CO2 exchange in a boreal peatland complex. Glob. Biogeochem. Cycles 12, 703–714 (1998).CAS 
Article 

Google Scholar 
Park, S.-B. et al. Temperature control of spring CO2 fluxes at a coniferous forest and a peat bog in Central Siberia. Atmosphere 12, 984 (2021).CAS 
Article 

Google Scholar 
Adkinson, A. C., Syed, K. H. & Flanagan, L. B. Contrasting responses of growing season ecosystem CO2 exchange to variation in temperature and water table depth in two peatlands in northern Alberta, Canada. J. Geophys. Res. Biogeosci. 116, G01004 (2011).Article 
CAS 

Google Scholar 
Heiskanen, L. et al. Carbon dioxide and methane exchange of a patterned subarctic fen during two contrasting growing seasons. Biogeosciences 18, 873–896 (2021).CAS 
Article 

Google Scholar 
Lafleur, P. M., Roulet, N. T., Bubier, J. L., Frolking, S. & Moore, T. R. Interannual variability in the peatland-atmosphere carbon dioxide exchange at an ombrotrophic bog. Glob. Biogeochem. Cycles 17, 1036 (2003).Article 
CAS 

Google Scholar 
Joiner, D. W., Lafleur, P. M., McCaughey, J. H. & Bartlett, P. A. Interannual variability in carbon dioxide exchanges at a boreal wetland in the BOREAS northern study area. J. Geophys. Res. Atmos. 104, 27663–27672 (1999).CAS 
Article 

Google Scholar 
McVeigh, P., Sottocornola, M., Foley, N., Leahy, P. & Kiely, G. Meteorological and functional response partitioning to explain interannual variability of CO2 exchange at an Irish Atlantic blanket bog. Agric. For. Meteorol. 194, 8–19 (2014).Article 

Google Scholar 
Helbig, M. et al. Increasing contribution of peatlands to boreal evapotranspiration in a warming climate. Nat. Clim. Change 10, 555–560 (2020).CAS 
Article 

Google Scholar 
Bourgault, M.-A., Larocque, M. & Garneau, M. How do hydrogeological setting and meteorological conditions influence water table depth and fluctuations in ombrotrophic peatlands? J. Hydrol. X 4, 100032 (2019).Article 

Google Scholar 
Yurova, A., Wolf, A., Sagerfors, J. & Nilsson, M. Variations in net ecosystem exchange of carbon dioxide in a boreal mire: modeling mechanisms linked to water table position. J. Geophys. Res. Biogeosci. 112, G02025 (2007).Article 
CAS 

Google Scholar 
Laine, A. M. et al. Warming impacts on boreal fen CO2 exchange under wet and dry conditions. Glob. Change Biol. 25, 1995–2008 (2019).Article 

Google Scholar 
Chivers, M. R., Turetsky, M. R., Waddington, J. M., Harden, J. W. & McGuire, A. D. Effects of experimental water table and temperature manipulations on ecosystem CO2 fluxes in an Alaskan rich fen. Ecosystems 12, 1329–1342 (2009).CAS 
Article 

Google Scholar 
Juszczak, R. et al. Ecosystem respiration in a heterogeneous temperate peatland and its sensitivity to peat temperature and water table depth. Plant Soil 366, 505–520 (2013).CAS 
Article 

Google Scholar 
Hao, D. et al. Estimating hourly land surface downward shortwave and photosynthetically active radiation from DSCOVR/EPIC observations. Remote Sens. Environ. 232, 111320 (2019).Article 

Google Scholar 
O’Donnell, J. A., Romanovsky, V. E., Harden, J. W. & McGuire, A. D. The effect of moisture content on the thermal conductivity of moss and organic soil horizons from black spruce ecosystems in interior Alaska. Soil Sci. 174, 646–651 (2009).Article 
CAS 

Google Scholar 
Nijp, J. J. et al. Rain events decrease boreal peatland net CO2 uptake through reduced light availability. Glob. Change Biol. 21, 2309–2320 (2015).Article 

Google Scholar 
Zhang, Y., Commane, R., Zhou, S., Williams, A. P. & Gentine, P. Light limitation regulates the response of autumn terrestrial carbon uptake to warming. Nat. Clim. Change 10, 739–743 (2020).CAS 
Article 

Google Scholar 
Samson, M. et al. The impact of experimental temperature and water level manipulation on carbon dioxide release in a poor fen in northern Poland. Wetlands 38, 551–563 (2018).Article 

Google Scholar 
Drever, C. R. et al. Natural climate solutions for Canada. Sci. Adv. 7, eabd6034 (2021).CAS 
Article 

Google Scholar 
Hemes, K. S., Runkle, B. R. K., Novick, K. A., Baldocchi, D. D. & Field, C. B. An ecosystem-scale flux measurement strategy to assess natural climate solutions. Environ. Sci. Technol. 55, 3494–3504 (2021).CAS 
Article 

Google Scholar 
Walker, T. W. N. et al. A systemic overreaction to years versus decades of warming in a subarctic grassland ecosystem. Nat. Ecol. Evol. 4, 101–108 (2020).Article 

Google Scholar 
Xu, B. et al. Seasonal variability of forest sensitivity to heat and drought stresses: a synthesis based on carbon fluxes from North American forest ecosystems. Glob. Change Biol. 26, 901–918 (2020).Article 

Google Scholar 
Piao, S. et al. Net carbon dioxide losses of northern ecosystems in response to autumn warming. Nature 451, 49–52 (2008).CAS 
Article 

Google Scholar 
Joyce, P. et al. How robust Is the apparent break-down of northern high-latitude temperature control on spring carbon uptake? Geophys. Res. Lett. 48, e2020GL091601 (2021).Article 

Google Scholar 
Grant, R. F. et al. Changes in net ecosystem productivity of boreal black spruce stands in response to changes in temperature at diurnal and seasonal time scales. Tree Physiol. 29, 1–17 (2009).CAS 
Article 

Google Scholar 
Kwon, M. J. et al. Siberian 2020 heatwave increased spring CO2 uptake but not annual CO2 uptake. Environ. Res. Lett. 16, 124030 (2021).CAS 
Article 

Google Scholar 
Yu, Z., Griffis, T. J. & Baker, J. M. Warming temperatures lead to reduced summer carbon sequestration in the U.S. Corn Belt. Commun. Earth Environ. 2, 53 (2021).Article 

Google Scholar 
Wang, S. et al. Warmer spring alleviated the impacts of 2018 European summer heatwave and drought on vegetation photosynthesis. Agric. For. Meteorol. 295, 108195 (2020).Article 

Google Scholar 
Wang, T. et al. Emerging negative impact of warming on summer carbon uptake in northern ecosystems. Nat. Commun. 9, 5391 (2018).CAS 
Article 

Google Scholar 
Lin, X. et al. Siberian and temperate ecosystems shape Northern Hemisphere atmospheric CO2 seasonal amplification. Proc. Natl Acad. Sci. USA 117, 21079–21087 (2020).CAS 
Article 

Google Scholar 
Helbig, M. et al. Warming response of peatland CO2 sink is sensitive to seasonality in warming trends. Zenodo https://doi.org/10.5281/zenodo.6685222 (2022).Didan, K. MOD13Q1 MODIS/Terra Vegetation Indices 16-Day L3 Global 250 m SIN Grid V006 [Data set]. NASA EOSDIS Land Processes DAAC (2015); https://doi.org/10.5067/MODIS/MOD13Q1.006Harris, I., Osborn, T. J., Jones, P. & Lister, D. Version 4 of the CRU TS monthly high-resolution gridded multivariate climate dataset. Sci. Data 7, 109 (2020).Article 

Google Scholar 
Lees, K. J. et al. Using spectral indices to estimate water content and GPP in Sphagnum moss and other peatland vegetation. IEEE Trans. Geosci. Remote Sens. 58, 4547–4557 (2020).Article 

Google Scholar 
Bennett, A. C., McDowell, N. G., Allen, C. D. & Anderson-Teixeira, K. J. Larger trees suffer most during drought in forests worldwide. Nat. Plants 1, 15139 (2015).Article 

Google Scholar 
Page, S. E. & Baird, A. J. Peatlands and global change: response and resilience. Annu. Rev. Environ. Resour. 41, 35–57 (2016).Article 

Google Scholar 
Juottonen, H. et al. Integrating decomposers, methane-cycling microbes and ecosystem carbon fluxes along a peatland successional gradient in a land uplift region. Ecosystems https://doi.org/10.1007/s10021-021-00713-w (2021). More

Sylvan, J. How to protect a coral reef: the public trust doctrine and the law of the sea recommended citation. Sustain. Dev. Law Policy 7, 12 (2006).
Google Scholar 
LaJeunesse, T. C. et al. Systematic revision of symbiodiniaceae highlights the antiquity and diversity of coral endosymbionts. Curr. Biol. 28, 2570–2580.e6 (2018).CAS 
PubMed 
Article 

Google Scholar 
Kopp, C. et al. Highly dynamic cellular-level response of symbiotic coral to a sudden increase in environmental nitrogen. mBio 4, e00052–13 (2013).CAS 
PubMed 
PubMed Central 

Google Scholar 
Muscatine, L. The role of symbiotic algae in carbon and energy flux in reef corals. Coral Reef. 25, 75–87 (1990).
Google Scholar 
Dubinsky, Z. & Stambler, N. Coral reefs: an ecosystem in transition. (Springer, 2011).Wiedenmann, J. et al. Nutrient enrichment can increase the susceptibility of reef corals to bleaching. https://doi.org/10.1038/NCLIMATE1661 (2012).Suggett, D. J., Warner, M. E. & Leggat, W. Symbiotic dinoflagellate functional diversity mediates coral survival under ecological crisis. Trends Ecol. Evolution 32, 735–745 (2017).Article 

Google Scholar 
Morris, L. A., Voolstra, C. R., Quigley, K. M., Bourne, D. G. & Bay, L. K. Nutrient availability and metabolism affect the stability of coral–symbiodiniaceae symbioses. Trends Microbiol. 27, 678–689 (2019).CAS 
PubMed 
Article 

Google Scholar 
Lehnert, E. M. et al. Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians. G3 (Bethesda) 4, 277–95 (2014).CAS 
Article 

Google Scholar 
Dubinsky, Z. & Berman-Frank, I. Uncoupling primary production from population growth in photosynthesizing organisms in aquatic ecosystems. in. Aquat. Sci. 63, 4–17 (2001).CAS 
Article 

Google Scholar 
Burriesci, M. S., Raab, T. K. & Pringle, J. R. Evidence that glucose is the major transferred metabolite in dinoflagellate–cnidarian symbiosis. J. Exp. Biol. 215, 3467–3477 (2012).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Davy, S. K., Allemand, D. & Weis, V. M. Cell biology of cnidarian-dinoflagellate symbiosis. Microbiol. Mol. Biol. Rev. 76, 229–61 (2012).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Rädecker, N., Pogoreutz, C., Voolstra, C. R., Wiedenmann, J. & Wild, C. Nitrogen cycling in corals: the key to understanding holobiont functioning? Trends Microbiol. 23, 490–497 (2015).PubMed 
Article 
CAS 

Google Scholar 
Cui, G. et al. Host-dependent nitrogen recycling as a mechanism of symbiont control in Aiptasia. PLOS Genet. 15, e1008189 (2019).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Rädecker, N. et al. Heat stress destabilizes symbiotic nutrient cycling in corals. Proc. Natl Acad. Sci. USA 118, https://doi.org/10.1073/pnas.2022653118 (2021).Weis, V. M. Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis. J. Exp. Biol. 211, 3059–3066 (2008).CAS 
PubMed 
Article 

Google Scholar 
Wooldridge, S. A. Breakdown of the coral-algae symbiosis: towards formalising a linkage between warm-water bleaching thresholds and the growth rate of the intracellular zooxanthellae. Biogeosciences Discuss. 9, 8111–8139 (2012).
Google Scholar 
Cziesielski, M. J., Schmidt‐Roach, S. & Aranda, M. The past, present, and future of coral heat stress studies. Ecol. Evol. https://doi.org/10.1002/ece3.5576 (2019).Leggat, W. et al. Differential responses of the coral host and their algal symbiont to thermal stress. PLoS ONE 6, e26687 (2011).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Pinzón, J. H. et al. Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral. R. Soc. Open Sci. 2, 140214 (2015).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Ziegler, M., Seneca, F. O., Yum, L. K., Palumbi, S. R. & Voolstra, C. R. Bacterial community dynamics are linked to patterns of coral heat tolerance. Nat. Commun. 8, 14213 (2017).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Bang, C. et al. Metaorganisms in extreme environments: do microbes play a role in organismal adaptation? Zoology 127, 1–19 (2018).PubMed 
Article 

Google Scholar 
Berkelmans, R. & van Oppen, M. J. H. The role of zooxanthellae in the thermal tolerance of corals: a “nugget of hope” for coral reefs in an era of climate change. Proc. Biol. Sci./R. Soc. 273, 2305–12 (2006).
Google Scholar 
Sampayo, E. M., Ridgway, T., Bongaerts, P. & Hoegh-Guldberg, O. Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type. Proc. Natl Acad. Sci. 105, 10444–10449 (2008).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Howells, E. J. et al. Coral thermal tolerance shaped by local adaptation of photosymbionts. Nat. Clim. Change https://doi.org/10.1038/nclimate1330 (2011).Cziesielski, M. J. et al. Multi-omics analysis of thermal stress response in a zooxanthellate cnidarian reveals the importance of associating with thermotolerant symbionts. Proc. Biol. Sci. 285, 20172654 (2018).PubMed 
PubMed Central 

Google Scholar 
Baker, A. C., Starger, C. J., McClanahan, T. R. & Glynn, P. W. Corals’ adaptive response to climate change. Nature 430, 741–741 (2004).CAS 
PubMed 
Article 

Google Scholar 
Thornhill, D. J., LaJeunesse, T. C., Kemp, D. W., Fitt, W. K. & Schmidt, G. W. Multi-year, seasonal genotypic surveys of coral-algal symbioses reveal prevalent stability or post-bleaching reversion. Mar. Biol. 148, 711–722 (2006).Article 

Google Scholar 
Palumbi, S. R., Barshis, D. J., Traylor-Knowles, N. & Bay, R. A. Mechanisms of reef coral resistance to environmental stress,making its relative ability to acclimate or adapt extremely important to the to future climate change. Science 344, 895–898 (2014).CAS 
PubMed 
Article 

Google Scholar 
Herrera, M. et al. Temperature transcends partner specificity in the symbiosis establishment of a cnidarian. ISME J. 15, 141–153 (2021).CAS 
PubMed 
Article 

Google Scholar 
Howells, E. J. et al. Corals in the hottest reefs in the world exhibit symbiont fidelity not flexibility. Mol. Ecol. 29, 899–911 (2020).CAS 
PubMed 
Article 

Google Scholar 
Hume, B. C. C., Mejia-Restrepo, A., Voolstra, C. R. & Berumen, M. L. Fine-scale delineation of Symbiodiniaceae genotypes on a previously bleached central Red Sea reef system demonstrates a prevalence of coral host-specific associations. Coral Reefs 1–19 https://doi.org/10.1007/s00338-020-01917-7 (2020).Perez, S. F., Cook, C. B. & Brooks, W. R. The role of symbiotic dinoflagellates in the temperature-induced bleaching response of the subtropical sea anemone Aiptasia pallida. J. Exp. Mar. Biol. Ecol. 256, 1–14 (2001).CAS 
PubMed 
Article 

Google Scholar 
Mieog, J. C. et al. The roles and interactions of symbiont, host and environment in defining coral fitness. PLoS ONE 4, e6364 (2009).Cantin, N. E., van Oppen, M. J. H., Willis, B. L., Mieog, J. C. & Negri, A. P. Juvenile corals can acquire more carbon from high-performance algal symbionts. Coral Reefs 28, 405–414 (2009).Article 

Google Scholar 
Herrera, M. et al. Unfamiliar partnerships limit cnidarian holobiont acclimation to warming. Glob. Change Biol. 26, 5539–5553 (2020).Article 

Google Scholar 
LaJeunesse, T. et al. Closely related Symbiodinium spp. differ in relative dominance in coral reef host communities across environmental, latitudinal and biogeographic gradients. Mar. Ecol. Prog. Ser. 284, 147–161 (2004).Article 

Google Scholar 
Parkinson, J. E. & Baums, I. B. The extended phenotypes of marine symbioses: ecological and evolutionary consequences of intraspecific genetic diversity in coral-algal associations. Front. Microbiol. 5, 445 (2014).PubMed 
PubMed Central 
Article 

Google Scholar 
Coffroth, M. A., Poland, D. M., Petrou, E. L., Brazeau, D. A. & Holmberg, J. C. Environmental symbiont acquisition may not be the solution to warming seas for reef-building corals. PLoS ONE 5, e13258 (2010).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Bellantuono, A. J., Granados-Cifuentes, C., Miller, D. J., Hoegh-Guldberg, O. & Rodriguez-Lanetty, M. Coral thermal tolerance: tuning gene expression to resist thermal stress. PLoS ONE 7, e50685 (2012).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Sunagawa, S. et al. Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont. BMC Genomics 10, 258 (2009).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Baumgarten, S. et al. The genome of Aiptasia, a sea anemone model for coral symbiosis. Proc. Natl Acad. Sci. 112, 201513318 (2015).
Google Scholar 
Matthews, J. L. et al. Menthol-induced bleaching rapidly and effectively provides experimental aposymbiotic sea anemones (Aiptasia sp.) for symbiosis investigations. J. Exp. Biol. jeb.128934 https://doi.org/10.1242/JEB.128934 (2015).Kenkel, C. D. et al. Evidence for a host role in thermotolerance divergence between populations of the mustard hill coral (Porites astreoides) from different reef environments. Mol. Ecol. 22, 4335–4348 (2013).CAS 
PubMed 
Article 

Google Scholar 
Polato, N. R., Altman, N. S. & Baums, I. B. Variation in the transcriptional response of threatened coral larvae to elevated temperatures. Mol. Ecol. 22, 1366–1382 (2013).CAS 
PubMed 
Article 

Google Scholar 
DeSalvo, M., Sunagawa, S., Voolstra, C. R. & Medina, M. Transcriptomic resonses to heat stress and bleaching in the elkhorn coral Acropora palmata. Mar. Ecol. Prog. Ser. 402, 97–113 (2010).CAS 
Article 

Google Scholar 
Maor-Landaw, K. & Levy, O. Gene expression profiles during short-term heat stress; branching vs. massive Scleractinian corals of the Red Sea. PeerJ 4, e1814 (2016).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Yamamoto, K. et al. Control of the heat stress-induced alternative splicing of a subset of genes by hnRNP K. Genes Cells 21, 1006–1014 (2016).CAS 
PubMed 
Article 

Google Scholar 
Seneca, F. O. & Palumbi, S. R. The role of transcriptome resilience in resistance of corals to bleaching. Mol. Ecol. 24, 1467–1484 (2015).PubMed 
Article 

Google Scholar 
Meyer, E. & Weis, V. M. Study of cnidarian-algal symbiosis in the “omics” age. Biol. Bull. 223, 44–65 (2012).CAS 
PubMed 
Article 

Google Scholar 
Oakley, C. A. et al. Thermal shock induces host proteostasis disruption and endoplasmic reticulum stress in the model symbiotic Cnidarian Aiptasia. J. Proteome Res. 16, 2121–2134 (2017).CAS 
PubMed 
Article 

Google Scholar 
Robbart, M. L., Peckol, P., Scordilis, S. P., Curran, H. A. & Brown-Saracino, J. Population recovery and differential heat shock protein expression for the corals Agaricia agaricites and A-tenuifolia in Belize. Mar. Ecol. Prog. Ser. 283, 151–160 (2004).Article 

Google Scholar 
Barshis, D. J. et al. Genomic basis for coral resilience to climate change. Proc. Natl Acad. Sci. 110, 1387–1392 (2013).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Traylor-Knowles, N., Rose, N. H. & Palumbi, S. R. The cell specificity of gene expression in the response to heat stress in corals. J. Exp. Biol. 220, 1837–1845 (2017).PubMed 

Google Scholar 
Benchimol, S. p53-dependent pathways of apoptosis. Cell Death Differ. 8, 1049–1051 (2001).CAS 
PubMed 
Article 

Google Scholar 
Moya, A. et al. Functional conservation of the apoptotic machinery from coral to man: The diverse and complex Bcl-2 and caspase repertoires of Acropora millepora. BMC Genomics 17, 62 (2016).Elmore, S. Apoptosis: a review of programmed cell death. Toxicol. Pathol. 35, 495–516 (2007).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Karim, W., Nakaema, S. & Hidaka, M. Temperature effects on the growth rates and photosynthetic activities of symbiodinium cells. J. Mar. Sci. Eng. 3, 368–381 (2015).Article 

Google Scholar 
Cunning, R. & Baker, A. C. Excess algal symbionts increase the susceptibility of reef corals to bleaching. Nat. Clim. Change 3, 259–262 (2013).Article 

Google Scholar 
Rehman, A. U. et al. Symbiodinium sp. cells produce light-induced intra- and extracellular singlet oxygen, which mediates photodamage of the photosynthetic apparatus and has the potential to interact with the animal host in coral symbiosis. N. Phytologist 212, 472–484 (2016).CAS 
Article 

Google Scholar 
Lesser, K. B. & Garcia, F. A. Association between polycystic ovary syndrome and glucose intolerance during pregnancy. J. Matern. Fetal Med. 6, 303–307 (1997).CAS 
PubMed 
Article 

Google Scholar 
Dunn, S. R., Schnitzler, C. E. & Weis, V. M. Apoptosis and autophagy as mechanisms of dinoflagellate symbiont release during cnidarian bleaching: every which way you lose. Proc. R. Soc. Lond. B: Biol. Sci. 274, 3079–3085 (2007).
Google Scholar 
DeSalvo, M. K. et al. Coral host transcriptomic states are correlated with Symbiodinium genotypes. Mol. Ecol. 19, 1174–1186 (2010).CAS 
PubMed 
Article 

Google Scholar 
Levin, R. A. et al. Engineering strategies to decode and enhance the genomes of coral symbionts. Front. Microbiol. https://doi.org/10.3389/fmicb.2017.01220 (2017).Yuyama, I., Ishikawa, M., Nozawa, M., Yoshida, M. & Ikeo, K. Transcriptomic changes with increasing algal symbiont reveal the detailed process underlying establishment of coral-algal symbiosis. Sci. Rep. 8, 16802 (2018).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Sproles, A. E. et al. Sub-cellular imaging shows reduced photosynthetic carbon and increased nitrogen assimilation by the non-native endosymbiont Durusdinium trenchii in the model cnidarian Aiptasia. Environ. Microbiol. 22, 3741–3753 (2020).CAS 
PubMed 
Article 

Google Scholar 
Rädecker, N. et al. Using Aiptasia as a model to study metabolic interactions in Cnidarian-Symbiodinium symbioses. Front. Physiol. 9, 214 (2018).PubMed 
PubMed Central 
Article 

Google Scholar 
Falkowski, P. G., Dubinsky, Z., Muscatine, L. & McCloskey, L. Population control in symbiotic corals. BioScience 43, 606–611 (1993).Article 

Google Scholar 
Wang & Douglas. Nitrogen recycling or nitrogen conservation in an alga-invertebrate symbiosis? J. Exp. Biol. 201, 2445–53 (1998).Loram, J. E., Trapido-Rosenthal, H. G. & Douglas, A. E. Functional significance of genetically different symbiotic algae Symbiodinium in a coral reef symbiosis. Mol. Ecol. 16, 4849–4857 (2007).CAS 
PubMed 
Article 

Google Scholar 
Karako-Lampert, S. et al. Transcriptome analysis of the scleractinian coral Stylophora pistillata. PLoS One 9, e88615 (2014).PubMed 
PubMed Central 
Article 
CAS 

Google Scholar 
Hillyer, K. E., Tumanov, S., Villas-Bôas, S. & Davy, S. K. Metabolite profiling of symbiont and host during thermal stress and bleaching in a model cnidarian-dinoflagellate symbiosis. J. Exp. Biol. 219, 516–27 (2016).PubMed 

Google Scholar 
Bertucci, A., Forêt, S., Ball, E. E. & Miller, D. J. Transcriptomic differences between day and night in Acropora millepora provide new insights into metabolite exchange and light-enhanced calcification in corals. Mol. Ecol. 24, 4489–4504 (2015).CAS 
PubMed 
Article 

Google Scholar 
Matthews, J. L. et al. Optimal nutrient exchange and immune responses operate in partner specificity in the cnidarian-dinoflagellate symbiosis. Proc. Natl Acad. Sci. 114, 13194–13199 (2017).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Lin, M.-F., Takahashi, S., Forêt, S., Davy, S. K. & Miller, D. J. Transcriptomic analyses highlight the likely metabolic consequences of colonization of a cnidarian host by native or non-native Symbiodinium species. Biol. Open 8, bio038281 (2019).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Medrano, E., Merselis, D. G., Bellantuono, A. J. & Rodriguez-Lanetty, M. Proteomic Basis of Symbiosis: A Heterologous Partner Fails to Duplicate Homologous Colonization in a Novel Cnidarian– Symbiodiniaceae Mutualism. Front. Microbiol. 10, 1153 (2019).Schoepf, V., Stat, M., Falter, J. L. & McCulloch, M. T. Limits to the thermal tolerance of corals adapted to a highly fluctuating, naturally extreme temperature environment. Sci. Rep. 5, 17639 (2015).CAS 
PubMed 
PubMed Central 
Article 

Google Scholar 
Xiang, T., Hambleton, E. A., DeNofrio, J. C., Pringle, J. R. & Grossman, A. R. Isolation of clonal axenic strains of the symbiotic dinoflagellate Symbiodinium and their growth and host specificity1. J. Phycol. 49, 447–458 (2013).CAS 
PubMed 
Article 

Google Scholar 
Bray, N. L., Pimentel, H., Melsted, P. & Pachter, L. Near-optimal probabilistic RNA-seq quantification. Nat. Biotechnol. 34, 525–527 (2016).CAS 
PubMed 
Article 

Google Scholar 
Pimentel, H., Bray, N. L., Puente, S., Melsted, P. & Pachter, L. Differential analysis of RNA-seq incorporating quantification uncertainty. Nat. Methods 14, 687–690 (2017).CAS 
PubMed 
Article 

Google Scholar  More