Philippa Kaur

Moore, J. An overview of parasite-induced behavioral alterations – and some lessons from bats. J. Exp. Biol. 216, 11–17 (2012).Article 

Google Scholar 
Nunn, C. L. & Altizer, S. Infectious Diseases in Primates: Behavior, Ecology and Evolution (Oxford University Press, 2006).Book 

Google Scholar 
Hutchings, M. R., Athanasiadou, S., Kyriazakis, I. & Gordon, I. J. Nutrition and Behaviour Group Symposium on ‘Exploitation of medicinal properties of plants by animals and man through food intake and foraging behaviour’: Can animals use foraging behaviour to combat parasites?. Proc. Nutr. Soc. 62, 361–370 (2003).Article 

Google Scholar 
Hawley, D. M., Etienne, R. S., Ezenwa, V. O. & Jolles, A. E. Does animal behavior underlie covariation between hosts’ exposure to infectious agents and susceptibility to infection? Implications for disease dynamics. Integr. Comp. Biol. 51, 528–539 (2011).Article 

Google Scholar 
Rimbach, R. et al. Brown spider monkeys (Ateles hybridus): a model for differentiating the role of social networks and physical contact on parasite transmission dynamics. Philos. Trans. R. Soc. B Biol. Sci. 370, 20140110 (2015).Article 

Google Scholar 
Friant, S., Ziegler, T. E. & Goldberg, T. L. Changes in physiological stress and behaviour in semi-free-ranging red-capped mangabeys (Cercocebus torquatus) following antiparasitic treatment. Proc. R. Soc. B Biol. Sci. 283, 20161201 (2016).Article 

Google Scholar 
Hudson, P. J. & Dobson, A. P. Macroparasites: Observed patterns in naturally fluctuating animal populations. In Ecology of infectious diseases in natural populations (eds Grenfell, B. T. & Dobson, A. P.) 144–176 (Cambridge University Press, 1995). https://doi.org/10.1017/CBO9780511629396.006.Chapter 

Google Scholar 
Murray, D. L., Lloyd, B. K. & Cary, J. R. Do parasitism and nutritional status interact to affect production in snowshoe hares?. Ecology 79, 1209–1222 (1998).Article 

Google Scholar 
Coop, R. L. & Holmes, P. H. Nutrition and parasite interaction. Int. J. Parasitol. 26, 951–962 (1996).Article 
CAS 

Google Scholar 
Møller, A. P., de Lope, F., Moreno, J., González, G. & Pérez, J. J. Ectoparasites and host energetics: House martin bugs and house martin nestlings. Oecologia 98, 263–268 (1994).Article 
ADS 

Google Scholar 
Munger, J. C. & Karasov, W. H. Sublethal parasites and host energy budgets: Tapeworm infection in white-footed mice. Ecology 70, 904–921 (1989).Article 

Google Scholar 
Hicks, O. et al. The energetic cost of parasitism in a wild population. Proc. R. Soc. B Biol. Sci. 285, 20180489 (2018).Article 

Google Scholar 
Sánchez, C. A. et al. On the relationship between body condition and parasite infection in wildlife: A review and meta-analysis. Ecol. Lett. 21, 1869–1884 (2018).Article 

Google Scholar 
Kyriazakis, I., Tolkamp, B. J. & Hutchings, M. R. Towards a functional explanation for the occurrence of anorexia during parasitic infections. Anim. Behav. 56, 265–274 (1998).Article 
CAS 

Google Scholar 
Hart, B. L. Behavioral adaptations to pathogens and parasites: Five strategies. Neurosci. Biobehav. Rev. 14, 273–294 (1990).Article 
CAS 

Google Scholar 
Lopes, P. C., Block, P. & König, B. Infection-induced behavioural changes reduce connectivity and the potential for disease spread in wild mice contact networks. Sci. Rep. 6, 1–10 (2016).Article 

Google Scholar 
Pelletier, F. & Festa-Bianchet, M. Effects of body mass, age, dominance and parasite load on foraging time of bighorn rams. Ovis canadensis. Behav. Ecol. Sociobiol. 56, 546–551 (2004).Article 

Google Scholar 
Bonneaud, C. et al. Assessing the cost of mounting an immune response. Am. Nat. 161, 367–379 (2003).Article 

Google Scholar 
Hart, B. L. The behavior of sick animals. Vet. Clin. North Am. Small Anim. Pract. 21, 225–237 (1991).Article 
CAS 

Google Scholar 
Poulin, R. Meta-analysis of parasite-induced behavioural changes. Anim. Behav. 48, 137–146 (1994).Article 

Google Scholar 
Janson, C. H. Toward an experiemental socioecology of primates. Examples from Argentine brown capuchin monkeys (Cebus apella nigritus). In Adaptive Radiations of Neotropical Primates (eds Janson, C. H. et al.) 309–325 (Plenum Press, 1996).Chapter 

Google Scholar 
Robinson, J. G. Seasonal variation in use of time and space by the wedge-capped capuchin monkey, Cebus olivaceus: Implications for foraging theory. Smithson. Contrib. Zool. https://doi.org/10.5479/si.00810282.431 (1986).Article 

Google Scholar 
Saj, T., Sicotte, P. & Paterson, J. D. Influence of human food consumption on the time budget of vervets. Int. J. Primatol. 20, 977–994 (1999).Article 

Google Scholar 
Ghai, R. R., Fugère, V., Chapman, C. A., Goldberg, T. L. & Davies, T. J. Sickness behaviour associated with non-lethal infections in wild primates. Proc. Biol. Sci. 282, 20151436 (2015).
Google Scholar 
Blersch, R. et al. Sick and tired: Sickness behaviour, polyparasitism and food stress in a gregarious mammal. Behav. Ecol. Sociobiol. 75, 169 (2021).Article 

Google Scholar 
Müller-Klein, N. et al. Physiological and social consequences of gastrointestinal nematode infection in a nonhuman primate. Behav. Ecol. 30, 322–335 (2019).Article 

Google Scholar 
Chapman, C. A. et al. Social behaviours and networks of vervet monkeys are influenced by gastrointestinal parasites. PLoS ONE 11, e0161113 (2016).Article 

Google Scholar 
Owen-Ashley, N. T. & Wingfield, J. C. Acute phase responses of passerine birds: characterization and seasonal variation. J. Ornithol. 148, 583–591 (2007).Article 

Google Scholar 
Owen-Ashley, N. T. & Wingfield, J. C. Seasonal modulation of sickness behavior in free-living northwestern song sparrows (Melospiza melodia morphna). J. Exp. Biol. 209, 3062–3070 (2006).Article 

Google Scholar 
Janson, C. H. & Di Bitetti, M. S. Experimental analysis of food detection in capuchin monkeys: Effects of distance, travel speed, and resource size. Behav. Ecol. Sociobiol. 41, 17–24 (1997).Article 

Google Scholar 
Di Bitetti, M. S. Food-associated calls in the tufted capuchin monkey (Cebus apella). PhD Thesis. (Stony Brook University, New York, 2001).Di Bitetti, M. S. & Janson, C. H. Reproductive socioecology of tufted capuchins (Cebus apella nigritus) in Norteastern Argentina. Int. J. Primatol. 22, 127–142 (2001).Article 

Google Scholar 
Janson, C., Baldovino, M. C. & Di Bitetti, M. The group life cycle and demography of brown capuchin monkeys (Cebus [apella] nigritus) in Iguazú National Park, Argentina. In Long-Term Field Studies of Primates (eds Kappeler, P. M. & Watts, D. P.) 185–212 (Springer, Berlin, 2012). https://doi.org/10.1007/978-3-642-22514-7_9.Chapter 

Google Scholar 
Robinson, J. C. & Galán Saúco, V. Bananas and plantains. (Crop production science in horticulture series N. 19, CAB International, 2010). https://doi.org/10.1079/9781845936587.0000Tiddi, B., Pfoh, R. & Agostini, I. The impact of food provisioning on parasite infection in wild black capuchin monkeys: A network approach. Primates 60, 297–306 (2019).Article 

Google Scholar 
Agostini, I., Vanderhoeven, E., Di Bitetti, M. S. & Beldomenico, P. M. Experimental testing of reciprocal effects of nutrition and parasitism in wild black capuchin monkeys. Sci. Rep. 7, 1–11 (2017).Article 

Google Scholar 
de Vries, H., Netto, W. J. & Hanegraaf, P. L. H. Matman: a program for the analysis of sociometric matrices and behavioural transition matrices. Behaviour 125, 157–175 (1993).Article 

Google Scholar 
Martin, P. & Bateson, P. Measuring Behaviour (Cambridge University Press, 1993). https://doi.org/10.1017/cbo9780511810893.Book 

Google Scholar 
Cox, D. D. & Todd, A. C. Survey of gastrointestinal parasitism in Wisconsin dairy cattle. J. Am. Vet. Med. Assoc. 141, 706–709 (1962).CAS 

Google Scholar 
Ballweber, L. R., Beugnet, F., Marchiondo, A. A. & Payne, P. A. American association of veterinary parasitologists’ review of veterinary fecal flotation methods and factors influencing their accuracy and use—Is there really one best technique?. Vet. Parasitol. 204, 73–80 (2014).Article 
CAS 

Google Scholar 
Godfrey, S. S. Networks and the ecology of parasite transmission: a framework for wildlife parasitology. Int. J. Parasitol. Parasites Wildl. 2, 235–245 (2013).Article 

Google Scholar 
Sosa, S., Sueur, C. & Puga-Gonzalez, I. Network measures in animal social network analysis: Their strengths, limits, interpretations and uses. Methods Ecol. Evol. 2020, 1–12 (2020).
Google Scholar 
Sosa, S. et al. A multilevel statistical toolkit to study animal social networks: The Animal Network Toolkit Software (ANTs) R package. Sci. Rep. 10, 12507 (2020).Article 
ADS 
CAS 

Google Scholar 
Croft, D. P., Madden, J. R., Franks, D. W. & James, R. Hypothesis testing in animal social networks. Trends Ecol. Evol. 26, 502–507 (2011).Article 

Google Scholar 
Farine, D. R. Animal social network inference and permutations for ecologists in R using asnipe. Methods Ecol. Evol. 4, 1187–1194 (2013).Article 

Google Scholar 
Burnham, K. P. & Anderson, D. R. Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach (2nd ed). Ecological Modelling (Springer, 2002). https://doi.org/10.1016/j.ecolmodel.2003.11.004Bates, D., Maechler, M., Bolker, B. & Walker, S. Fitting linear mixed-effects models using lme4. J. Stat. Softw. 67, 1–48 (2015).Article 

Google Scholar 
Barton, K. MuMIn: Multi-model inference. R package version 1.15.6. 63 (2016). citeulike:11961261Carlton, E. D., Demas, G. E. & French, S. S. Leptin, a neuroendocrine mediator of immune responses, inflammation, and sickness behaviors. Horm. Behav. 62, 272–279 (2012).Article 
CAS 

Google Scholar 
Tizard, I. Sickness behavior, its mechanisms and significance. Anim. Health Res. Rev. 9, 87–99 (2008).Article 

Google Scholar 
Inoue, W. & Luheshi, G. N. Acute starvation alters lipopolysaccharide-induced fever in leptin-dependent and -independent mechanisms in rats. Am. J. Physiol. Regul. Integr. Comp. Physiol. 299, R1709-19 (2010).Article 

Google Scholar 
Macdonald, L., Radler, M., Paolini, A. G. & Kent, S. Calorie restriction attenuates LPS-induced sickness behavior and shifts hypothalamic signaling pathways to an antiinflammatory bias. Am. J. Physiol. Regul. Integr. Comp. Physiol. 301, 172–184 (2011).Article 

Google Scholar 
Wisse, B. E. et al. Physiological regulation of hypothalamic IL-1β gene expression by leptin and glucocorticoids: implications for energy homeostasis. Am. J. Physiol. Endocrinol. Metab. 287, R1107–R1113 (2004).Article 

Google Scholar 
Pohl, J., Woodside, B. & Luheshi, G. N. Changes in hypothalamically mediated acute-phase inflammatory responses to lipopolysaccharide in diet-induced obese rats. Endocrinology 150, 4901–4910 (2009).Article 
CAS 

Google Scholar 
Bretscher, P. On analyzing how the Th1/Th2 phenotype of an immune response is determined: classical observations must not be ignored. Front. Immunol. 10, 1–7 (2019).Article 

Google Scholar 
Poppi, D. P., Sykes, A. R. & Dynes, R. A. The effect of endoparasitism on host nutrition – the implications for nutrient manipulation. Proc. New Zeal. Soc. Anim. Prod. 50, 237–243 (1990).
Google Scholar 
Coulson, G., Cripps, J. K., Garnick, S., Bristow, V. & Beveridge, I. Parasite insight: assessing fitness costs, infection risks and foraging benefits relating to gastrointestinal nematodes in wild mammalian herbivores. Philos. Trans. R. Soc. B Biol. Sci. 373, 197 (2018).Article 

Google Scholar 
Worsley-Tonks, K. E. L. & Ezenwa, V. O. Anthelmintic treatment affects behavioural time allocation in a free-ranging ungulate. Anim. Behav. 108, 47–54 (2015).Article 

Google Scholar 
Jones, O. R., Anderson, R. M. & Pilkington, J. G. Parasite-induced anorexia in a free-ranging mammalian herbivore: An experimental test using Soay sheep. Can. J. Zool. 84, 685–692 (2006).Article 

Google Scholar 
Cripps, J. K., Martin, J. K. & Coulson, G. Anthelmintic treatment does not change foraging strategies of female eastern grey kangaroos, Macropus giganteus. PLoS ONE 11, e0147384 (2016).Article 

Google Scholar 
Giles, N. Predation risk and reduced foraging activity in fish: experiments with parasitized and non-parasitized three-spined sticklebacks, Gasterosteus aculeatus L.. J. Fish Biol. 31, 37–44 (1987).Article 

Google Scholar 
Knutie, S. A., Wilkinson, C. L., Wu, Q. C., Ortega, C. N. & Rohr, J. R. Host resistance and tolerance of parasitic gut worms depend on resource availability. Oecologia 183, 1031–1040 (2017).Article 
ADS 

Google Scholar 
Lopes, P. C., French, S. S., Woodhams, D. C. & Binning, S. A. Metabolic response of dolphins to short-term fasting reveals physiological changes that differ from the traditional fasting model. J. Exp. Biol. 224, jeb225847 (2021).Article 

Google Scholar 
Behringer, D. C., Butler, M. J. & Shields, J. D. Ecology: Avoidance of disease by social lobsters. Nature 441, 421 (2006).Article 
ADS 
CAS 

Google Scholar 
Poirotte, C. et al. Mandrills use olfaction to socially avoid parasitized conspecifics. Sci. Adv. 3, e1601721 (2017).Article 
ADS 

Google Scholar  More

Verma, A. et al. The genetic basis of toxin biosynthesis in dinofagellates. Microorganisms 7, 222 (2019).Article 
CAS 

Google Scholar 
Hallegraeff, G. M. Ocean climate change, phytoplankton community responses, and harmful algal blooms: A formidable predictive challenge1. J. Phycol. 46, 220–235 (2010).Article 
CAS 

Google Scholar 
Hoppenrath, M., Murray, S., Chomérat, N., Horiguchi, T. Marine Benthic Dinoflagellates – Unveiling Their Worldwide Biodiversity (Kleine Senckenberg-reihe 54). E. Schweizerbart’sche Verlagbuchhandlung (2014).Luo, Z. et al. Cryptic diversity within the harmful dinoflagellate Akashiwo sanguinea in coastal Chinese waters is related to differentiated ecological niches. Harmful Algae 66, 88–96 (2017).Article 

Google Scholar 
Litaker, R. W. et al. Taxonomy of Gambierdiscus including four new species, Gambierdiscus caribaeus, Gambierdiscus carolinianus, Gambierdiscus carpenteri and Gambierdiscus ruetzleri (Gonyaulacales, Dinophyceae). Phycologia 48, 344–390 (2009).Article 

Google Scholar 
Hoppenrath, M. et al. Taxonomy and phylogeny of the benthic Prorocentrum species (Dinophyceae)—A proposal and review. Harmful Algae 27, 1–28 (2013).Article 

Google Scholar 
Wells, M. L. et al. Future HAB science: Directions and challenges in a changing climate. Harmful Algae 91, 101632 (2020).Article 

Google Scholar 
Rhodes, L. World-wide occurrence of the toxic dinoflagellate genus Ostreopsis Schmidt. Toxicon 57, 400–407 (2011).Article 
CAS 

Google Scholar 
Parsons, M. L. et al. Gambierdiscus and Ostreopsis: Reassessment of the state of knowledge of their taxonomy, geography, ecophysiology, and toxicology. Harmful Algae 14, 107–129 (2012).Article 
CAS 

Google Scholar 
Schmidt, J. Preliminary report of the botanical results of the Danish expedition to Siam (1899–1900). Part IV Peridiniales. Bot. Tidsskr. 24, 212–221 (1901).
Google Scholar 
Accoroni, S. et al. Ostreopsis fattorussoi sp. nov. (Dinophyceae), a new benthic toxic Ostreopsis species from the eastern Mediterranean Sea. J. Phycol. 52, 1064–1084 (2016).Article 
CAS 

Google Scholar 
Verma, A., Hoppenrath, M., Dorantes-Aranda, J. J., Harwood, D. T. & Murray, S. A. Molecular and phylogenetic characterization of Ostreopsis (Dinophyceae) and the description of a new species, Ostreopsis rhodesae sp. nov., from a subtropical Australian lagoon. Harmful Algae 60, 116–130 (2016).Article 
CAS 

Google Scholar 
Fukuyo, Y. Taxonomical study on benthic dinoflagellates collected in coral reefs. Nippon Suisan Gakk. 47, 967–978 (1981).Article 

Google Scholar 
Faust, M. A. Three new Ostreopsis species (Dinophyceae): O. marinus sp. nov., O. belizeanus sp. nov., and O. caribbeanus sp. nov.. Phycologia 38, 92–99 (1999).Article 

Google Scholar 
Faust, M. A. & Morton, S. L. Morphology and ecology of the marine dinoflagellate Ostreopsis labens sp. nov. (Dinophyceae). J. Phycol. 31, 456–463 (1995).Article 

Google Scholar 
Chomérat, N., Bilien, G., Couté, A. & Quod, J.-P. Reinvestigation of Ostreopsis mascarenensis Quod (Dinophyceae, Gonyaulacales) from Reunion Island (SW Indian Ocean): Molecular phylogeny and emended description. Phycologia 59, 140–153 (2020).Article 

Google Scholar 
Boisnoir, A., Bilien, G., Lemée, R. & Chomérat, N. First insights on the diversity of the genus Ostreopsis (Dinophyceae, Gonyaulacales) in Guadeloupe Island, with emphasis on the phylogenetic position of O. heptagona. Eur. J. Protistol. 83, 125875 (2022).Article 

Google Scholar 
Chomérat, N. et al. Ostreopsis lenticularis Y. Fukuyo (Dinophyceae, Gonyaulacales) from French Polynesia (South Pacific Ocean): A revisit of its morphology, molecular phylogeny and toxicity. Harmful Algae 84, 95–111 (2019).Article 

Google Scholar 
Nguyen-Ngoc, L. et al. Morphological and genetic analyses of Ostreopsis (Dinophyceae, Gonyaulacales, Ostreopsidaceae) species from Vietnamese waters with a re-description of the type species, O. siamensis 1. J. Phycol. 57, 1059–1083 (2021).Article 

Google Scholar 
Faust, M. A. Observation of sand-dwelling toxic dinoflagellates (Dinophyceae) from widely differing sites, including two new species. J. Phycol. 31, 996–1003 (1995).Article 

Google Scholar 
David, H., Laza-Martínez, A., Miguel, I. & Orive, E. Broad distribution of Coolia monotis and restricted distribution of Coolia cf. canariensis (Dinophyceae) on the Atlantic coast of the Iberian Peninsula. Phycologia 53, 342–352 (2014).Article 

Google Scholar 
Rhodes, L. L. et al. Toxic dinoflagellates (Dinophyceae) from Rarotonga Cook Islands. Toxicon 56, 751–758 (2010).Article 
CAS 

Google Scholar 
Meunier, A. Coolia monotis sp. nov. in Mémoires du Musée Royal d’Histoire Naturelle de Belgique. Microplankton Mer Flamande, Méme partie—Les Péridiniens 8, 68–69 (1919).
Google Scholar 
Rhodes, L. et al. Epiphytic dinoflagellates in sub-tropical New Zealand, in particular the genus Coolia Meunier. Harmful Algae 34, 36–41 (2014).Article 

Google Scholar 
Rhodes, L., Adamson, J., Suzuki, T., Briggs, L. & Garthwaite, I. Toxic marine epiphytic dinoflagellates, Ostreopsis siamensis and Coolia monotis (Dinophyceae), in New Zealand. N. Z. J. Mar. Freshw. Res. 34, 371–383 (2000).Article 

Google Scholar 
Fraga, S., Penna, A., Bianconi, I., Paz, B. & Zapata, M. Coolia canariensis sp. nov. (Dinophyceae), a new nontoxic epiuphytic benthic dinoflagellate from the Canary Islands 1. J. Phycol. 44, 1060–1070 (2008).Article 
CAS 

Google Scholar 
Lindemann, E. Abteilung Peridineae (Dinoflagellate). In Die Natürlichen Pflanzenfamilien nebst ihren Gattungen und wichtigeren Arten insbesondere den Nutzpflanzen, 3–104 (1928).Biecheler, B. Recherches sur les Péridiniens. Bulletin biologique de France et de Belgique Supplement 36, 1–149 (1952).
Google Scholar 
Balech, E. Étude des dinoflagellés du sable de Roscoff. Revue Algologique, Nouvelle Serie 2, 29–52 (1956).

Google Scholar 
Mohammad-Noor, N. et al. Autecology and phylogeny of Coolia tropicalis and Coolia malayensis (Dinophyceae), with emphasis on taxonomy of C. tropicalis based on light microscopy, scanning electron microscopy and LSU r DNA 1. J. Phycol. 49, 536–545 (2013).Article 

Google Scholar 
Leaw, C. P., Lim, P. T., Cheng, K. W., Ng, B. K. & Usup, G. Morphology and molecular characterization of a new species of thecate benthic dinoflagellate, Coolia malayensis sp. nov. (Dinophyceae) 1. J. Phycol. 46, 162–171 (2010).Article 
CAS 

Google Scholar 
Ten-Hage, L., Turquet, J., Quod, J. & Couté, A. Coolia areolata sp. nov. (Dinophyceae), a new sand-dwelling dinoflagellate from the southwestern Indian Ocean. Phycologia 39, 377–383 (2000).Article 

Google Scholar 
Karafas, S., York, R. & Tomas, C. Morphological and genetic analysis of the Coolia monotis species complex with the introduction of two new species, Coolia santacroce sp. nov. and Coolia palmyrensis sp. nov. (Dinophyceae). Harmful Algae 46, 18–33 (2015).Article 
CAS 

Google Scholar 
David, H., Laza-Martínez, A., Rodríguez, F., Fraga, S. & Orive, E. Coolia guanchica sp. nov.(Dinophyceae) a new epibenthic dinoflagellate from the Canary Islands (NE Atlantic Ocean). Eur. J. Phycol. 55, 76–88 (2020).Article 
CAS 

Google Scholar 
Sato, S. et al. Phylogeography of Ostreopsis along west Pacific coast, with special reference to a novel clade from Japan. PLoS One 6, e27983 (2011).Article 
ADS 
CAS 

Google Scholar 
Penna, A. et al. Characterization of Ostreopsis and Coolia (Dinophyceae) isolates in the western Mediterranean Sea based on morphology, toxicity and internal transcribed spacer 5.8 S rDNA sequences. J. Phycol. 41, 212–225 (2005).Article 
CAS 

Google Scholar 
Tawong, W. et al. Distribution and molecular phylogeny of the dinoflagellate genus Ostreopsis in Thailand. Harmful Algae 37, 160–171 (2014).Article 

Google Scholar 
Faimali, M. et al. Toxic effects of harmful benthic dinoflagellate Ostreopsis ovata on invertebrate and vertebrate marine organisms. Mar. Environ. Res. 76, 97–107 (2012).Article 
CAS 

Google Scholar 
Tubaro, A. et al. Case definitions for human poisonings postulated to palytoxins exposure. Toxicon 57, 478–495 (2011).Article 
CAS 

Google Scholar 
Ciminiello, P. et al. Investigation of the toxin profile of Greek mussels Mytilus galloprovincialis by liquid chromatography mass spectrometry. Toxicon 47, 174–181 (2006).Article 
CAS 

Google Scholar 
Giussani, V. et al. Active role of the mucilage in the toxicity mechanism of the harmful benthic dinoflagellate Ostreopsis cf. ovata. Harmful Algae 44, 46–53 (2015).Article 
CAS 

Google Scholar 
Usami, M. et al. Palytoxin analogs from the dinoflagellate Ostreopsis siamensis. J. Am. Chem. Soc. 117, 5389–5390 (1995).Article 
CAS 

Google Scholar 
Ukena, T. et al. Structure elucidation of ostreocin D, a palytoxin analog isolated from the dinoflagellate Ostreopsis siamensis. Biosci. Biotechnol. Biochem. 65, 2585–2588 (2001).Article 
CAS 

Google Scholar 
Amzil, Z. et al. Ovatoxin-a and palytoxin accumulation in seafood in relation to Ostreopsis cf. ovata blooms on the French Mediterranean coast. Mar. Drugs 10, 477–496 (2012).Article 
CAS 

Google Scholar 
Ciminiello, P. et al. Unique toxin profile of a Mediterranean Ostreopsis cf. ovata strain: HR LC-MS n characterization of ovatoxin-f, a new palytoxin congener. Chem. Res. Toxicol. 25, 1243–1252 (2012).Article 
CAS 

Google Scholar 
Laza-Martinez, A., Orive, E. & Miguel, I. Morphological and genetic characterization of benthic dinoflagellates of the genera Coolia, Ostreopsis and Prorocentrum from the south-eastern Bay of Biscay. Eur. J. Phycol. 46, 45–65 (2011).Article 

Google Scholar 
Holmes, M. J., Lewis, R. J., Jones, A. & Hoy, A. W. W. Cooliatoxin, the first toxin from Coolia monotis (Dinophyceae). Nat. Toxins 3, 355–362 (1995).Article 
CAS 

Google Scholar 
Rhodes, L. L. & Thomas, A. E. Coolia monotis (Dinophyceae): A toxic epiphytic microalgal species found in New Zealand (Note). N. Z. J. Mar. Freshw. Res. 31, 139–141 (1997).Article 
CAS 

Google Scholar 
Tibiriçá, C. EJd. A. et al. Diversity and toxicity of the genus Coolia Meunier in Brazil, and detection of 44-methyl Gambierone in Coolia tropicalis. Toxins 12, 327 (2020).Article 

Google Scholar 
Tillmann, U., Hoppenrath, M. & Gottschling, M. Reliable determination of Prorocentrum micans Ehrenb. (Prorocentrales, Dinophyceae) based on newly collected material from the type locality. Eur. J. Phycol 54, 417–431 (2019).Article 
CAS 

Google Scholar 
Chomérat, N. et al. Taxonomy and toxicity of a bloom-forming Ostreopsis species (Dinophyceae, Gonyaulacales) in Tahiti island (South Pacific Ocean): One step further towards resolving the identity of O. siamensis. Harmful Algae 98, 101888 (2020).Article 

Google Scholar 
Rhodes, L. L. et al. The dinoflagellate genera Gambierdiscus and Ostreopsis from subtropical Raoul Island and North Meyer Island, Kermadec Islands. N. Z. J. Mar. Freshw. Res. 51, 490–504 (2017).Article 
CAS 

Google Scholar 
Penna, A. et al. A phylogeographical study of the toxic benthic dinoflagellate genus Ostreopsis Schmidt. J. Biogeogr. 37, 830–841 (2010).Article 

Google Scholar 
Zhang, H. et al. Morphology and molecular phylogeny of Ostreopsis cf. ovata and O. lenticularis (Dinophyceae) from Hainan Island South China Sea. Phycol. Res. 66, 3–14 (2018).Article 
ADS 
CAS 

Google Scholar 
Carnicer, O., García-Altares, M., Andree, K. B., Diogène, J. & Fernández-Tejedor, M. First evidence of Ostreopsis cf. ovata in the eastern tropical Pacific Ocean Ecuadorian coast. Bot. Mar. 59, 267–274 (2016).
Google Scholar 
Nascimento, S. M. et al. Ostreopsis cf. ovata (Dinophyceae) molecular phylogeny, morphology, and detection of ovatoxins in strains and field samples from Brazil. Toxins 12, 70 (2020).Article 
CAS 

Google Scholar 
Caron, D. A. et al. Defining DNA-based operational taxonomic units for microbial-eukaryote ecology. Appl. Environ. Microbiol. 75, 5797–5808 (2009).Article 
ADS 
CAS 

Google Scholar 
McManus, G. B. & Katz, L. A. Molecular and morphological methods for identifying plankton: What makes a successful marriage?. J. Plankton Res. 31, 1119–1129 (2009).Article 
CAS 

Google Scholar 
De Vargas, C. et al. Eukaryotic plankton diversity in the sunlit ocean. Science 348, 1261605 (2015).Article 

Google Scholar 
del Campo, J. et al. Ecological and evolutionary significance of novel protist lineages. Eur. J. Protistol. 55, 4–11 (2016).Article 

Google Scholar 
Hallegraeff, G. Harmful algal blooms: A global overview. Man. Harmful Mar. Microalgae 33, 1–22 (2003).
Google Scholar 
Penna, A., Casabianca, S., Guerra, A. F., Vernesi, C. & Scardi, M. Analysis of phytoplankton assemblage structure in the Mediterranean Sea based on high-throughput sequencing of partial 18S rRNA sequences. Mar. Genom. 36, 49–55 (2017).Article 

Google Scholar 
Zarauz, L. & Irigoien, X. Effects of Lugol’s fixation on the size structure of natural nano–microplankton samples, analyzed by means of an automatic counting method. J. Plankton Res. 30, 1297–1303 (2008).Article 

Google Scholar 
De Luca, D., Piredda, R., Sarno, D. & Kooistra, W. H. Resolving cryptic species complexes in marine protists: phylogenetic haplotype networks meet global DNA metabarcoding datasets. ISME J. 15, 1931–1942 (2021).Article 

Google Scholar 
Wang, Z. et al. Phytoplankton community and HAB species in the South China Sea detected by morphological and metabarcoding approaches. Harmful Algae 118, 102297 (2022).Article 
CAS 

Google Scholar 
Le Bescot, N. et al. Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding. Environ. Microbiol. 18, 609–626 (2016).Article 

Google Scholar 
Hoppenrath, M. Dinoflagellate taxonomy—A review and proposal of a revised classification. Mar. Biodivers. 47, 381–403 (2017).Article 

Google Scholar 
Boenigk, J., Ereshefsky, M., Hoef-Emden, K., Mallet, J. & Bass, D. Concepts in protistology: Species definitions and boundaries. Eur. J. Protistol. 48, 96–102 (2012).Article 

Google Scholar 
David, H., Laza-Martínez, A., Miguel, I. & Orive, E. Ostreopsis cf. siamensis and Ostreopsis cf. ovata from the Atlantic Iberian Peninsula: Morphological and phylogenetic characterization. Harmful Algae 30, 44–55 (2013).Article 
CAS 

Google Scholar 
Aligizaki, K. & Nikolaidis, G. The presence of the potentially toxic genera Ostreopsis and Coolia (Dinophyceae) in the North Aegean Sea Greece. Harmful Algae 5, 717–730 (2006).Article 

Google Scholar 
Selina, M. S. & Orlova, T. Y. First occurrence of the genus Ostreopsis (Dinophyceae) in the Sea of Japan. Bot. Mar. 53, 243–249 (2010).Article 

Google Scholar 
Kang, N. S. et al. Morphology and molecular characterization of the epiphytic benthic dinoflagellate Ostreopsis cf. ovata in the temperate waters off Jeju Island Korea. Harmful Algae 27, 98–112 (2013).Article 
CAS 

Google Scholar 
Momigliano, P., Sparrow, L., Blair, D. & Heimann, K. The diversity of Coolia spp. (Dinophyceae Ostreopsidaceae) in the central Great Barrier Reef region. PloS One 8, e79278 (2013).Article 
ADS 
CAS 

Google Scholar 
Nguyen, L. N. Morphology and distribution of the three epiphytic dinoflagellate species Coolia monotis, C. tropicalis, and C. canariensis (Ostreopsidaceae, Gonyaulacales, Dinophyceae) from Vietnamese coastal waters. Ocean Sci. 49, 211–221 (2014).Article 

Google Scholar 
Verma, A. et al. Functional significance of phylogeographic structure in a toxic benthic marine microbial eukaryote over a latitudinal gradient along the East Australian Current. Ecol. Evol. 10, 6257–6273 (2020).Article 

Google Scholar 
Wayne Litaker, R. et al. Recognizing dinoflagellate species using ITS rDNA sequences 1. J. Phycol. 43, 344–355 (2007).Article 

Google Scholar 
Kremp, A. et al. Phylogenetic relationships, morphological variation, and toxin patterns in the Alexandrium ostenfeldii (D inophyceae) complex: Implications for species boundaries and identities. J. Phycol. 50, 81–100 (2014).Article 
CAS 

Google Scholar 
Nascimento, S. M., da Silva, R. A., Oliveira, F., Fraga, S. & Salgueiro, F. Morphology and molecular phylogeny of Coolia tropicalis, Coolia malayensis and a new lineage of the Coolia canariensis species complex (Dinophyceae) isolated from Brazil. Eur. J. Phycol. 54, 484–496 (2019).Article 
CAS 

Google Scholar 
Phua, Y. H., Roy, M. C., Lemer, S., Husnik, F. & Wakeman, K. C. Diversity and toxicity of Pacific strains of the benthic dinoflagellate Coolia (Dinophyceae), with a look at the Coolia canariensis species complex. Harmful Algae 109, 102120 (2021).Article 

Google Scholar 
Selwood, A. I. et al. A sensitive assay for palytoxins, ovatoxins and ostreocins using LC-MS/MS analysis of cleavage fragments from micro-scale oxidation. Toxicon 60, 810–820 (2012).Article 
CAS 

Google Scholar 
Ciminiello, P. et al. Isolation and structure elucidation of ovatoxin-a, the major toxin produced by Ostreopsis ovata. J. Am. Chem. Soc. 134, 1869–1875 (2012).Article 
CAS 

Google Scholar 
Dell’Aversano, C. et al. Ostreopsis cf. ovata from the Mediterranean area. Variability in toxinprofiles and structural elucidation of unknowns through LC-HRMSn. In Proc. of the 16th International Conference on Harmful Algae, 70–73 (2014).Terajima, T., Uchida, H., Abe, N. & Yasumoto, T. Structure elucidation of ostreocin-A and ostreocin-E1, novel palytoxin analogs produced by the dinoflagellate Ostreopsis siamensis, using LC/Q-TOF MS. Biosci. Biotechnol. Biochem. 83, 381–390 (2019).Article 
CAS 

Google Scholar 
Tartaglione, L. et al. Chemical, molecular, and eco-toxicological investigation of Ostreopsis sp. from Cyprus Island: Structural insights into four new ovatoxins by LC-HRMS/MS. Anal. Bioanal. Chem. 408, 915–932 (2016).Article 
CAS 

Google Scholar 
Murray, J. S. et al. The role of 44-methylgambierone in ciguatera fish poisoning: Acute toxicity, production by marine microalgae and its potential as a biomarker for Gambierdiscus spp. Harmful Algae 97, 101853 (2020).Article 
CAS 

Google Scholar 
Nakajima, I., Oshima, Y. & Yasumoto, T. Toxicity of benthic dinoflagellates found in coral reef. Toxicity of benthic dinoflagellates in Okinawa. Nippon Suisan Gakk. 47, 1029–1033 (1981).Article 

Google Scholar 
Boente-Juncal, A. et al. Structure elucidation and biological evaluation of maitotoxin-3, a homologue of gambierone, from Gambierdiscus belizeanus. Toxins 11, 79 (2019).Article 
CAS 

Google Scholar 
Stuart, J. et al. Geographical distribution, molecular and toxin diversity of the dinoflagellate species Gambierdiscus honu in the Pacific region. Harmful Algae 118, 102308 (2022).Article 
CAS 

Google Scholar 
Smith, K. F. et al. A new Gambierdiscus species (Dinophyceae) from Rarotonga, Cook Islands: Gambierdiscus cheloniae sp. nov. Harmful Algae 60, 45–56 (2016).Article 
CAS 

Google Scholar 
Guillard, R. R. L. Culture of Marine Invertebrates Animals 29–60 (Plenum Press, 1975).Book 

Google Scholar 
Chomérat, N., iti Gatti, C. M., Nézan, É. & Chinain, M. Studies on the benthic genus Sinophysis (Dinophysales, Dinophyceae) II. S. canaliculata from Rapa Island (French Polynesia). Phycologia 56, 193–203 (2017).Article 

Google Scholar 
Abràmoff, M. D., Magalhães, P. J. & Ram, S. J. Image processing with ImageJ. Biophotonics Int. 11, 36–42 (2004).
Google Scholar 
Verma, A. et al. Molecular phylogeny, morphology and toxigenicity of Ostreopsis cf. siamensis (Dinophyceae) from temperate south-east Australia. Phycol. Res. 64, 146–159 (2016).Article 
CAS 

Google Scholar 
Kearse, M. et al. Geneious basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28, 1647–1649 (2012).Article 

Google Scholar 
Kumar, S., Stecher, G. & Tamura, K. MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol. Biol. Evol. 33, 1870–1874 (2016).Article 
CAS 

Google Scholar 
Posada, D. & Crandall, K. A. MODELTEST: Testing the model of DNA substitution. Bioinformatics 14, 817–818 (1998).Article 
CAS 

Google Scholar 
Ronquist, F. & Huelsenbeck, J. P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572–1574 (2003).Article 
CAS 

Google Scholar 
Murray, J. S. et al. Acute toxicity of gambierone and quantitative analysis of gambierones produced by cohabitating benthic dinoflagellates. Toxins 13, 333 (2021).Article 
CAS 

Google Scholar 
Murray, J. S., Boundy, M. J., Selwood, A. I. & Harwood, D. T. Development of an LC-MS/MS method to simultaneously monitor maitotoxins and selected ciguatoxins in algal cultures and P-CTX-1B in fish. Harmful Algae 80, 80–87 (2018).Article 
CAS 

Google Scholar  More

Benca, J. P., Duijnstee, I. A. & Looy, C. V. Fossilized pollen malformations as indicators of past environmental stress and meiotic disruption: Insights from modern conifers. Paleobiology, 1–34 (2022).Marshall, J. E., Lakin, J., Troth, I. & Wallace-Johnson, S. M. Uv-b radiation was the devonian-carboniferous boundary terrestrial extinction kill mechanism. Sci. Adv. 6, eaba0768 (2020).Article 
ADS 
CAS 

Google Scholar 
Looy, C. V., Twitchett, R. J., Dilcher, D. L., Van Konijnenburg-Van Cittert, J. H. & Visscher, H. Life in the end-permian dead zone. Proc. Natl. Acad. Sci. 98, 7879–7883 (2001).Article 
ADS 
CAS 

Google Scholar 
Foster, C. & Afonin, S. Abnormal pollen grains: An outcome of deteriorating atmospheric conditions around the permian-triassic boundary. J. Geol. Soc. 162, 653–659 (2005).Article 
ADS 

Google Scholar 
Hochuli, P. A., Schneebeli-Hermann, E., Mangerud, G. & Bucher, H. Evidence for atmospheric pollution across the permian-triassic transition. Geology 45, 1123–1126 (2017).Article 
ADS 

Google Scholar 
Galasso, F., Bucher, H. & Schneebeli-Hermann, E. Mapping monstrosity: Malformed sporomorphs across the smithian/spathian boundary interval and beyond (salt range, pakistan). Global Planet. Change 219, 103975 (2022).Article 

Google Scholar 
Van de Schootbrugge, B. et al. Floral changes across the triassic/jurassic boundary linked to flood basalt volcanism. Nat. Geosci. 2, 589–594 (2009).Article 
ADS 

Google Scholar 
Lindström, S. et al. Volcanic mercury and mutagenesis in land plants during the end-triassic mass extinction. Sci. Adv. 5, eaaw4018 (2019).Article 
ADS 

Google Scholar 
Gravendyck, J., Schobben, M., Bachelier, J. B. & Kürschner, W. M. Macroecological patterns of the terrestrial vegetation history during the end-triassic biotic crisis in the central european basin: A palynological study of the bonenburg section (nw-germany) and its supra-regional implications. Global Planet. Change 194, 103286 (2020).Article 

Google Scholar 
Vilas-Boas, M., Pereira, Z., Cirilli, S., Duarte, L. V. & Fernandes, P. New data on the palynology of the triassic-jurassic boundary of the silves group, lusitanian basin, portugal. Rev. Palaeobot. Palynol. 290, 104426 (2021).Article 

Google Scholar 
Galasso, F., Feist-Burkhardt, S. & Schneebeli-Hermann, E. The palynology of the toarcian oceanic anoxic event at dormettingen, southwest germany, with emphasis on changes in vegetational dynamics. Rev. Palaeobotany Palynol. 304, 104701 (2022).Article 

Google Scholar 
Galasso, F., Feist-Burkhardt, S. & Schneebeli-Hermann, E. Do spores herald the toarcian oceanic anoxic event?. Rev. Palaeobot. Palynol. 306, 104748 (2022).Article 

Google Scholar 
Hay, W. W. & Floegel, S. New thoughts about the cretaceous climate and oceans. Earth Sci. Rev. 115, 262–272 (2012).Article 
ADS 
CAS 

Google Scholar 
Faucher, G., Erba, E., Bottini, C. & Gambacorta, G. Calcareous nannoplankton response to the latest cenomanian oceanic anoxic event 2 perturbation. RIVISTA ITALIANA DI PALEONTOLOGIA E STRATIGRAFIA (2017).Cohen, K. M., Finney, S. C., Gibbard, P. L. & Fan, J.-X. The ics international chronostratigraphic chart. Epis. J. Int. Geosci. 36, 199–204 (2013).
Google Scholar 
Caron, M. & Homewood, P. Evolution of early planktic foraminifers. Mar. Micropaleontol. 7, 453–462 (1983).Article 
ADS 

Google Scholar 
Jarvis, I. et al. Microfossil assemblages and the cenomanian-turonian (late cretaceous) oceanic anoxic event. Cretac. Res. 9, 3–103 (1988).Article 

Google Scholar 
Huber, B. T., Leckie, R. M., Norris, R. D., Bralower, T. J. & CoBabe, E. Foraminiferal assemblage and stable isotopic change across the cenomanian-turonian boundary in the subtropical north atlantic. J. Foraminiferal Res. 29, 392–417 (1999).
Google Scholar 
Culver, S. J. & Rawson, P. F. Biotic response to global change: The last 145 million years (Cambridge University Press, 2006).Erba, E. Calcareous nannofossils and mesozoic oceanic anoxic events. Mar. Micropaleontol. 52, 85–106 (2004).Article 
ADS 

Google Scholar 
Gebhardt, H., Kuhnt, W. & Holbourn, A. Foraminiferal response to sea level change, organic flux and oxygen deficiency in the cenomanian of the tarfaya basin, southern morocco. Mar. Micropaleontol. 53, 133–157 (2004).Article 
ADS 

Google Scholar 
Hardenbol, J. et al. Mesozoic and cenozoic sequence chronostratigraphic framework of european basins. Soc. Sediment. Geol. (1998).Miller, K. G. et al. The phanerozoic record of global sea-level change. Science 310, 1293–1298 (2005).Article 
ADS 
CAS 

Google Scholar 
Voigt, S., Gale, A. S. & Voigt, T. Sea-level change, carbon cycling and palaeoclimate during the late cenomanian of northwest europe; an integrated palaeoenvironmental analysis. Cretac. Res. 27, 836–858 (2006).Article 

Google Scholar 
Haq, B. U. Cretaceous eustasy revisited. Global Planet. Change 113, 44–58 (2014).Article 
ADS 

Google Scholar 
Sames, B. et al. Short-term sea-level changes in a greenhouse world-a view from the cretaceous. Palaeogeogr. Palaeoclimatol. Palaeoecol. 441, 393–411 (2016).Article 

Google Scholar 
Arthur, M. A., Dean, W. E. & Pratt, L. M. Geochemical and climatic effects of increased marine organic carbon burial at the cenomanian/turonian boundary. Nature 335, 714–717 (1988).Article 
ADS 

Google Scholar 
Tsikos, H. et al. Carbon-isotope stratigraphy recorded by the cenomanian-turonian oceanic anoxic event: Correlation and implications based on three key localities. J. Geol. Soc. 161, 711–719 (2004).Article 
ADS 
CAS 

Google Scholar 
Jarvis, I., Lignum, J. S., Gröcke, D. R., Jenkyns, H. C. & Pearce, M. A. Black shale deposition, atmospheric co2 drawdown, and cooling during the cenomanian-turonian oceanic anoxic event. Paleoceanography26 (2011).van Bentum, E. C., Reichart, G.-J. & Damsté, J. S. S. Organic matter provenance, palaeoproductivity and bottom water anoxia during the cenomanian/turonian oceanic anoxic event in the newfoundland basin (northern proto north atlantic ocean). Org. Geochem. 50, 11–18 (2012).Article 

Google Scholar 
Owens, J. D., Lyons, T. W. & Lowery, C. M. Quantifying the missing sink for global organic carbon burial during a cretaceous oceanic anoxic event. Earth Planet. Sci. Lett. 499, 83–94 (2018).Article 
ADS 
CAS 

Google Scholar 
Bralower, T. J. Calcareous nannofossil biostratigraphy and assemblages of the cenomanian-turonian boundary interval: Implications for the origin and timing of oceanic anoxia. Paleoceanography 3, 275–316 (1988).Article 
ADS 

Google Scholar 
Leckie, R. M., Bralower, T. J. & Cashman, R. Oceanic anoxic events and plankton evolution: Biotic response to tectonic forcing during the mid-cretaceous. Paleoceanography 17, 13–1 (2002).Article 

Google Scholar 
Slater, S. M., Bown, P., Twitchett, R. J., Danise, S. & Vajda, V. Global record of “ghost’’ nannofossils reveals plankton resilience to high co2 and warming. Science 376, 853–856 (2022).Article 
ADS 
CAS 

Google Scholar 
Forster, A., Schouten, S., Moriya, K., Wilson, P. A. & Sinninghe Damsté, J. S. Tropical warming and intermittent cooling during the cenomanian/turonian oceanic anoxic event 2: Sea surface temperature records from the equatorial atlantic. Paleoceanography22 (2007).Barclay, R. S., McElwain, J. C. & Sageman, B. B. Carbon sequestration activated by a volcanic co2 pulse during ocean anoxic event 2. Nat. Geosci. 3, 205–208 (2010).Article 
ADS 
CAS 

Google Scholar 
Damsté, J. S. S., van Bentum, E. C., Reichart, G.-J., Pross, J. & Schouten, S. A co2 decrease-driven cooling and increased latitudinal temperature gradient during the mid-cretaceous oceanic anoxic event 2. Earth Planet. Sci. Lett. 293, 97–103 (2010).Article 
ADS 

Google Scholar 
Heimhofer, U. et al. Vegetation response to exceptional global warmth during oceanic anoxic event 2. Nat. Commun. 9, 1–8 (2018).Article 
CAS 

Google Scholar 
Huber, B. T., MacLeod, K. G., Watkins, D. K. & Coffin, M. F. The rise and fall of the cretaceous hot greenhouse climate. Global Planet. Change 167, 1–23 (2018).Article 
ADS 

Google Scholar 
Robinson, S. A. et al. Southern hemisphere sea-surface temperatures during the cenomanian-turonian: Implications for the termination of oceanic anoxic event 2. Geology 47, 131–134 (2019).Article 
ADS 
CAS 

Google Scholar 
Voigt, S., Gale, A. S. & Flögel, S. Midlatitude shelf seas in the cenomanian-turonian greenhouse world: Temperature evolution and north atlantic circulation. Paleoceanography19 (2004).Van Helmond, N. et al. Freshwater discharge controlled deposition of cenomanian-turonian black shales on the nw european epicontinental shelf (wunstorf, north germany). Clim. Past Discuss 10, 3755–3786 (2014).ADS 

Google Scholar 
Li, Y.-X., Montanez, I. P., Liu, Z. & Ma, L. Astronomical constraints on global carbon-cycle perturbation during oceanic anoxic event 2 (oae2). Earth Planet. Sci. Lett. 462, 35–46 (2017).Article 
ADS 
CAS 

Google Scholar 
O’Brien, C. L. et al. Cretaceous sea-surface temperature evolution: Constraints from tex86 and planktonic foraminiferal oxygen isotopes. Earth Sci. Rev. 172, 224–247 (2017).Article 
ADS 

Google Scholar 
Jones, C. E. & Jenkyns, H. C. Seawater strontium isotopes, oceanic anoxic events, and seafloor hydrothermal activity in the jurassic and cretaceous. Am. J. Sci. 301, 112–149 (2001).Article 
ADS 
CAS 

Google Scholar 
Snow, L. J., Duncan, R. A. & Bralower, T. J. Trace element abundances in the rock canyon anticline, pueblo, colorado, marine sedimentary section and their relationship to caribbean plateau construction and oxygen anoxic event 2. Paleoceanography20 (2005).Kuroda, J. et al. Contemporaneous massive subaerial volcanism and late cretaceous oceanic anoxic event 2. Earth Planet. Sci. Lett. 256, 211–223 (2007).Article 
ADS 
CAS 

Google Scholar 
Turgeon, S. C. & Creaser, R. A. Cretaceous oceanic anoxic event 2 triggered by a massive magmatic episode. Nature 454, 323–326 (2008).Article 
ADS 
CAS 

Google Scholar 
Floegel, S. et al. Simulating the biogeochemical effects of volcanic co2 degassing on the oxygen-state of the deep ocean during the cenomanian/turonian anoxic event (oae2). Earth Planet. Sci. Lett. 305, 371–384 (2011).Article 
ADS 
CAS 

Google Scholar 
Tegner, C. et al. Magmatism and eurekan deformation in the high arctic large igneous province: 40ar-39ar age of kap washington group volcanics, north greenland. Earth Planet. Sci. Lett. 303, 203–214 (2011).Article 
ADS 
CAS 

Google Scholar 
Du Vivier, A. D. et al. Marine 187os/188os isotope stratigraphy reveals the interaction of volcanism and ocean circulation during oceanic anoxic event 2. Earth Planet. Sci. Lett. 389, 23–33 (2014).Article 
ADS 

Google Scholar 
Du Vivier, A., Selby, D., Condon, D., Takashima, R. & Nishi, H. Pacific 187os/188os isotope chemistry and u-pb geochronology: Synchroneity of global os isotope change across oae 2. Earth Planet. Sci. Lett. 428, 204–216 (2015).Article 
ADS 

Google Scholar 
Meyers, P. A. Why are the (delta )13corg values in phanerozoic black shales more negative than in modern marine organic matter?. Geochem. Geophys. Geosyst. 15, 3085–3106 (2014).Article 
ADS 
CAS 

Google Scholar 
Jenkyns, H. C., Dickson, A. J., Ruhl, M. & Van den Boorn, S. H. Basalt-seawater interaction, the plenus cold event, enhanced weathering and geochemical change: Deconstructing oceanic anoxic event 2 (cenomanian-turonian, late cretaceous). Sedimentology 64, 16–43 (2017).Article 
CAS 

Google Scholar 
Scaife, J. et al. Sedimentary mercury enrichments as a marker for submarine large igneous province volcanism? evidence from the mid-cenomanian event and oceanic anoxic event 2 (late cretaceous). Geochem. Geophys. Geosyst. 18, 4253–4275 (2017).Article 
ADS 
CAS 

Google Scholar 
Schröder-Adams, C. J., Herrle, J. O., Selby, D., Quesnel, A. & Froude, G. Influence of the high arctic igneous province on the cenomanian/turonian boundary interval, sverdrup basin, high canadian arctic. Earth Planet. Sci. Lett. 511, 76–88 (2019).Article 
ADS 

Google Scholar 
Jolet, P., Philip, J., Thomel, G., Lopez, G. & Tronchetti, G. Nouvelles données biostratigraphiques sur la limite cénomanien-turonien. la coupe de cassis (sud-est de la france): Proposition d’un hypostratotype européen. Comptes Rendus de l’Académie des Sciences-Series IIA-Earth and Planetary Science325, 703–709 (1997).Bown, P. R. & Young, J. Calcareous nannofossil biostratigraphy (Springer, 1998).Green, T., Renne, P. R. & Keller, C. B. Continental flood basalts drive phanerozoic extinctions. Proc. Natl. Acad. Sci. 119, e2120441119 (2022).Article 
CAS 

Google Scholar 
Percival, L. M. et al. Does large igneous province volcanism always perturb the mercury cycle? Comparing the records of oceanic anoxic event 2 and the end-cretaceous to other mesozoic events. Am. J. Sci. 318, 799–860 (2018).Article 
ADS 
CAS 

Google Scholar 
Salazar, L. et al. Diversity patterns of ferns along elevational gradients in andean tropical forests. Plant Ecol. Divers. 8, 13–24 (2015).Article 

Google Scholar 
Mehltreter, K., Walker, L. R. & Sharpe, J. M. Fern ecology (Cambridge University Press, 2010).Carvajal-Hernández, C. I., Gómez-Díaz, J. A., Kessler, M. & Krömer, T. Influence of elevation and habitat disturbance on the functional diversity of ferns and lycophytes. Plant Ecol. Divers. 11, 335–347 (2018).Article 

Google Scholar 
Kürschner, W. M., Batenburg, S. J. & Mander, L. Aberrant classopollis pollen reveals evidence for unreduced (2 n) pollen in the conifer family cheirolepidiaceae during the triassic-jurassic transition. Proc. Royal Soc. B: Biol. Sci. 280, 20131708 (2013).Article 

Google Scholar 
Traverse, A. Paleopalynology Vol. 28 (Springer Science & Business Media, 2007).Tyson, R. V. Palynofacies investigation of callovian (middle jurassic) sediments from dsdp site 534, blake-bahama basin, western central atlantic. Mar. Pet. Geol. 1, 3–13 (1984).Article 

Google Scholar 
RV, T. Sedimentary organic matter: Organic facies and palynofacieschapman & hall. London, 615pp (1995).Vakhrameyev, V. Classopollis pollen as an indicator of jurassic and cretaceous climate. Int. Geol. Rev. 24, 1190–1196 (1982).Article 

Google Scholar 
Vakhrameev, V. Range and palaeoecology of mesozoic conifers, the cheirolepidiaceae. Paleontol. Zh. 1, 19–34 (1970).
Google Scholar 
WATSON, J. Some lower cretaceous conifers of the cheirolepidiaceae from the usa and england. Palaeontology 20, 715–749 (1977).
Google Scholar 
Fonseca, C., Mendonça Filho, J. G., Lézin, C., De Oliveira, A. D. & Duarte, L. V. Organic matter deposition and paleoenvironmental implications across the cenomanian-turonian boundary of the subalpine basin (se france): Local and global controls. Int. J. Coal Geol. 218, 103364 (2020).Article 
CAS 

Google Scholar 
Benca, J. P., Duijnstee, I. A. & Looy, C. V. Uv-b-induced forest sterility: Implications of ozone shield failure in earth’s largest extinction. Sci. Adv. 4, e1700618 (2018).Article 
ADS 

Google Scholar 
Wilson, L. A study in variation of picea glauca (moench) voss pollen. Grana 4, 380–387 (1963).
Google Scholar 
Lindström, S., McLoughlin, S. & Drinnan, A. N. Intraspecific variation of taeniate bisaccate pollen within permian glossopterid sporangia, from the prince charles mountains, antarctica. Int. J. Plant Sci. 158, 673–684 (1997).Article 

Google Scholar 
Leitch, A. & Leitch, I. Ecological and genetic factors linked to contrasting genome dynamics in seed plants. New Phytol. 194, 629–646 (2012).Article 
CAS 

Google Scholar 
Coffin, M. F. & Eldholm, O. Large igneous provinces: crustal structure, dimensions, and external consequences. Rev. Geophys. 32, 1–36 (1994).Article 
ADS 

Google Scholar 
Wignall, P. B. Large igneous provinces and mass extinctions. Earth Sci. Rev. 53, 1–33 (2001).Article 
ADS 
CAS 

Google Scholar 
McElwain, J. C., Wade-Murphy, J. & Hesselbo, S. P. Changes in carbon dioxide during an oceanic anoxic event linked to intrusion into gondwana coals. Nature 435, 479–482 (2005).Article 
ADS 
CAS 

Google Scholar 
Bond, D. P., Wignall, P. B., Keller, G. & Kerr, A. Large igneous provinces and mass extinctions: An update. Volcan., Impacts, Mass Extinc.: Causes Effects 505, 29–55 (2014).
Google Scholar 
Burgess, S., Bowring, S., Fleming, T. & Elliot, D. High-precision geochronology links the ferrar large igneous province with early-jurassic ocean anoxia and biotic crisis. Earth Planet. Sci. Lett. 415, 90–99 (2015).Article 
ADS 
CAS 

Google Scholar 
Burgess, S. D., Muirhead, J. D. & Bowring, S. A. Initial pulse of siberian traps sills as the trigger of the end-permian mass extinction. Nat. Commun. 8, 1–6 (2017).Article 
ADS 
CAS 

Google Scholar 
Ernst, R. E. & Youbi, N. How large igneous provinces affect global climate, sometimes cause mass extinctions, and represent natural markers in the geological record. Palaeogeogr. Palaeoclimatol. Palaeoecol. 478, 30–52 (2017).Article 

Google Scholar 
Ruhl, M. et al. Reduced plate motion controlled timing of early jurassic karoo-ferrar large igneous province volcanism. Sci. Adv. 8, eabo0866 (2022).Article 
CAS 

Google Scholar 
Dickens, G. R., Paull, C. K. & Wallace, P. Direct measurement of in situ methane quantities in a large gas-hydrate reservoir. Nature 385, 426–428 (1997).Article 
ADS 
CAS 

Google Scholar 
Courtillot, V. E. & Renne, P. R. On the ages of flood basalt events. C.R. Geosci. 335, 113–140 (2003).Article 
ADS 

Google Scholar 
Rampino, M. R., Rodriguez, S., Baransky, E. & Cai, Y. Global nickel anomaly links siberian traps eruptions and the latest permian mass extinction. Sci. Rep. 7, 1–6 (2017).Article 
CAS 

Google Scholar 
Clapham, M. E. & Renne, P. R. Flood basalts and mass extinctions. Annu. Rev. Earth Planet. Sci. 47, 275–303 (2019).Article 
ADS 
CAS 

Google Scholar 
McElwain, J. C., Popa, M. E., Hesselbo, S. P., Haworth, M. & Surlyk, F. Macroecological responses of terrestrial vegetation to climatic and atmospheric change across the triassic/jurassic boundary in east greenland. Paleobiology 33, 547–573 (2007).Article 

Google Scholar 
Van de Schootbrugge, B. et al. End-triassic calcification crisis and blooms of organic-walled ‘disaster species’. Palaeogeogr. Palaeoclimatol. Palaeoecol. 244, 126–141 (2007).Article 

Google Scholar 
Ruckwied, K., Götz, A. E., Pálfy, J. & Török, Á. Palynology of a terrestrial coal-bearing series across the triassic/jurassic boundary (mecsek mts, hungary). Central Euro. Geol. 51, 1–15 (2008).Article 
CAS 

Google Scholar 
Götz, A., Ruckwied, K., Pálfy, J. & Haas, J. Palynological evidence of synchronous changes within the terrestrial and marine realm at the triassic/jurassic boundary (csővár section, hungary). Rev. Palaeobot. Palynol. 156, 401–409 (2009).Article 

Google Scholar 
Hochuli, P. A., Hermann, E., Vigran, J. O., Bucher, H. & Weissert, H. Rapid demise and recovery of plant ecosystems across the end-permian extinction event. Global Planet. Change 74, 144–155 (2010).Article 
ADS 

Google Scholar 
Bonis, N. et al.Palaeoenvironmental changes and vegetation history during the Triassic-Jurassic transition (LPP Contribution Series No. 29, 2010).Bonis, N. R. & Kürschner, W. M. Vegetation history, diversity patterns, and climate change across the triassic/jurassic boundary. Paleobiology 38, 240–264 (2012).Article 

Google Scholar 
Visscher, H. et al. Environmental mutagenesis during the end-permian ecological crisis. Proc. Natl. Acad. Sci. 101, 12952–12956 (2004).Article 
ADS 
CAS 

Google Scholar  More

Ouellet, V. et al. Sci. Total Environ. 736, 139679 (2020).Article 
CAS 
PubMed 

Google Scholar 
Sutadian, A. D., Muttil, N., Yilmaz, A. G. & Perera, B. J. C. Environ. Monit. Assess. 188, 58 (2016).Article 
PubMed 

Google Scholar 
Murdoch, P. S., Baron, J. S. & Miller, T. L. J. Am. Water Resour. Assoc. 36, 347–366 (2000).Article 
CAS 

Google Scholar 
Hannah, D. M. & Garner, G. Prog Phys Geogr. 39, 68–92 (2015).Article 

Google Scholar 
Abbott, B. W. et al. Nat. Geosci. 12, 533–540 (2019).Article 
CAS 

Google Scholar 
Grill, G. et al. Nature 569, 215–221 (2019).Article 
CAS 
PubMed 

Google Scholar 
Hermanson, L. et al. Bull. Am. Meteorol. Soc. 103, E1117–E1129 (2022).Article 

Google Scholar 
Webb, B. W., Hannah, D. M., Moore, R. D., Brown, L. E. & Nobilis, F. Hydrol. Process. 22, 902–918 (2008).Article 

Google Scholar 
Hester, E. T. & Doyle, M. W. J. Am. Water Resour. Assoc. 47, 571–587 (2011).Article 

Google Scholar 
Schliemann, S. A., Grevstad, N. & Brazeau, R. H. Hydrol. Process 35, e14001 (2021).Article 

Google Scholar 
Jackson, F. L., Fryer, R. J., Hannah, D. M., Millar, C. P. & Malcolm, I. A. Sci. Total Environ. 612, 1543–1558 (2018).Article 
CAS 
PubMed 

Google Scholar 
O’Sullivan, A. M., Devito, K. J. & Curry, R. A. Catena 177, 70–83 (2019).Article 

Google Scholar 
Chang, H. & Psaris, M. Sci. Total Environ. 461, 587–600 (2013).Article 
PubMed 

Google Scholar 
Hester, E. T. & Bauman, K. S. J. Am. Water Resour. Assoc. 49, 328–342 (2013).Article 

Google Scholar 
Croghan, D., Van Loon, A. F., Sadler, J. P., Bradley, C. & Hannah, D. M. Hydrol. Process. 33, 144–159 (2018).Article 

Google Scholar 
Levia, D. F. et al. Nat. Geosci. 13, 656–658 (2020).Article 
CAS 

Google Scholar 
Nelson, K. C. & Palmer, M. A. J. Am. Water Resour. Assoc 43, 440–452 (2007).Article 

Google Scholar 
Heggenes, J. et al. River Res. Appl. 37, 743–765 (2021).Article 

Google Scholar 
Menberg, K., Blum, P., Kurylyk, B. L. & Bayer, P. Hydrol. Earth Syst. Sci. 18, 4453–4466 (2014).Article 

Google Scholar 
Tissen, C., Benz, S. A., Menberg, K., Bayer, P. & Blum, P. Environ. Res. Lett. 14, 104012 (2019).Article 
CAS 

Google Scholar 
Hannah, D. M. et al. Hydrol. Process. 36, e14525 (2022).Article 

Google Scholar 
Carothers, C. et al. Ecol. Soc. https://doi.org/10.5751/ES-11972-260116 (2021).Dugdale, S. J., Hannah, D. M. & Malcolm, I. A. Earth Sci. Rev. 175, 97–113 (2017).Article 

Google Scholar 
Wanders, N., van Vliet, M. T. H., Wada, Y., Bierkens, M. F. P. & van Beek, L. P. H. Water Resour. Res. 55, 2760–2778 (2019).Article 

Google Scholar 
Tavares, M. H. et al. Remote Sens. Environ. 241, 11172 (2020).Article 

Google Scholar 
Dugdale, S. J., Klaus, J. & Hannah, D. M. Water Resour. Res. 58, e2021WR031168 (2022).Article 

Google Scholar 
Mao, F. et al. Environ. Sci. Technol. 54, 9145–9158 (2020).Article 
CAS 
PubMed 

Google Scholar 
Hannah, D. M. et al. Hydrol. Process. 25, 1191–1200 (2011).Article 

Google Scholar 
Do, H. X., Gudmundsson, L., Leonard, M. & Westra, S. Earth Syst. Sci. Data 10, 765–785 (2018).Article 

Google Scholar  More

Smith, V. H. Eutrophication of freshwater and coastal marine ecosystems: A global problem. Environ. Sc. Pollut. R. Int. 10, 126–139 (2003).Article 
CAS 

Google Scholar 
Jeppesen, E., Sondergaard, M. & Jensen, J. P. Lake responses to reduced nutrient loading an analysis of contemporary long term data from 35 case studies. Freshw. Biol. 50, 1747–1771 (2005).Article 
CAS 

Google Scholar 
Kim, L. H., Choi, E. & Michal, K. S. Sediment characteristics, phosphorus types and phosphorus release rates between river and lake sediments. Chemosphere 50, 53–61 (2003).Article 
ADS 
CAS 

Google Scholar 
Jiang, X. J., Xiang, C. & Yao, Y. Effects of biological activity, light, temperature and oxygen on phosphorus release processes at the sediment and water interface of Taihu Lake, China. Water Res. 42, 2251–2259 (2008).Article 
CAS 

Google Scholar 
Wang, S. R., Jin, X. C. & Bu, Q. Y. Effects of dissolved oxygen supply level on phosphorus release from lake sediments. Colloids Surf. A 316, 245–252 (2008).Article 
CAS 

Google Scholar 
Miao, S. Y., De-Laune, R. D. & Jug-Sujinda, A. Influence of sediment redox conditions on release/solubility of metals and nutrients in a Louisiana Mississippi River deltaic plain freshwater lake. Sci. Total Environ. 371, 334–343 (2006).Article 
ADS 
CAS 

Google Scholar 
Smits, J. G. C. & Van Beek, J. K. L. ECO: A generic eutrophication model including comprehensive sediment-water interaction. PLoS ONE 8, e68104 (2013).Article 
ADS 
CAS 

Google Scholar 
Topcu, A. & Pulatsu, S. Phosphorus fractions and cycling in the sediment of a shallow eutrophic pond. Tarim Bilim. Derg. 20, 63–70 (2014).Article 

Google Scholar 
Jeppesen, E., Sondergaard, M. & Jensen, J. P. Lake responses to reduced nutrient loading-an analysis of contemporary long-term data from 35 case studies. Freshw. Biol. 50, 1747–1771 (2005).Article 
CAS 

Google Scholar 
Song, C. L., Cao, X. Y. & Liu, Y. B. Seasonal variations in chlorophyll a concentrations in relation to potentials of sediment phosphate release by different mechanisms in a large chinese shallow eutrophic lake (Lake Taihu). Geomicrobiol. J. 26, 508–515 (2009).Article 
CAS 

Google Scholar 
Pop, O., Martin, U., Abel, C. & Müller, J. P. The twin-arginine signal peptide of PhoD and the TatAd/Cd proteins of Bacillus subtilis form an autonomous tat translocation system. J. Biol. Chem. 277, 3268–3273 (2002).Article 
CAS 

Google Scholar 
Luo, H. W., Zhang, H. M. & Long, R. A. Depth distributions of alkaline phosphatase and phosphonate utilization genes in the North Pacific Subtropical Gyre. Aquat. Microb. Ecol. 62, 61–69 (2011).Article 

Google Scholar 
Tan, H. et al. Long-term phosphorus fertilisation increased the diversity of the total bacterial community and the phoD phosphorus mineraliser group in pasture soils. Biol. Fertil. Soils 49, 661–672 (2012).Article 

Google Scholar 
Wan, W. J. et al. Spatial differences in soil microbial diversity caused by pH-driven organic phosphorus mineralization. Land Degrad. Dev. 32, 766–776 (2021).Article 

Google Scholar 
Chen, X. et al. Response of soil phoD phosphatase gene to long-term combined applications of chemical fertilizers and organic materials. Appl. Soil Ecol. 119, 197–204 (2017).Article 
ADS 

Google Scholar 
Sagnon, A. et al. Amendment with Burkina Faso phosphate rock-enriched composts alters soil chemical properties and microbial structure, and enhances sorghum agronomic performance. Sci. Rep. 12, 13945 (2022).Article 
ADS 
CAS 

Google Scholar 
Chhabra, S. et al. Fertilization management affects the alkaline phosphatase bacterial community in barley rhizosphere soil. Biol. Fertil. Soils 49, 31–39 (2012).Article 

Google Scholar 
Luo, H. W., Benner, R., Long, R. A. & Hu, J. J. Subcellular localization of marine bacterial alkaline phosphatases. Proc. Natl. Acad. Sci. 106, 212–219 (2009).Article 

Google Scholar 
Zhang, T. X. et al. Suspended particles phoD alkaline phosphatase gene diversity in large shallow eutrophic Lake Taihu. Sci. Total Environ. 728, 138615 (2020).Article 
ADS 
CAS 

Google Scholar 
Li, H. et al. Nutrients regeneration pathway, release potential, transformation pattern and algal utilization strategies jointly drove cyanobacterial growth and their succession. J. Environ. Sci. 103, 255–267 (2021).Article 
CAS 

Google Scholar 
Sun, T. T., Huang, T. & Liu, Y. X. Effects of cyanobacterial growth and decline on the phoD-harboring bacterial community structure in sediments of Lake Chaohu. J. Lake Sci. 34, 32 (2022).ADS 

Google Scholar 
Li, Y., Ai, M. J., Sun, Y., Zhang, Y. Q. & Zhang, J. Q. Spirosoma lacussanchae sp. nov., a phosphate-solubilizing bacterium isolated from a freshwater reservoir. Int. J. Syst. Evol. Microbiol. 67, 3144–3149 (2017).Article 
CAS 

Google Scholar 
Li, Y., Zhang, J. J., Xu, W. L. & Mou, Z. S. Microbial community structure in the sediments and its relation to environmental factors in eutrophicated Sancha Lake. Int. J. Environ. Res. Public Health 16, 1931–1946 (2019).Article 
CAS 

Google Scholar 
Jia, B. Y., Tang, Y. & Fu, W. L. Relationship among sediment characteristics, eutrophication process and human activities in the Sancha Lake. China Environ. Sci. 33, 1638–1644 (2013).CAS 

Google Scholar 
Li, Y., Zhang, J. J., Zhang, J. Q., Xu, W. L. & Mou, Z. S. Characteristics of inorganic phosphate-solubilizing bacteria from the sediments of a Eutrophic Lake. Int. J. Environ. Res. Public Health 16, 2141 (2019).Article 
CAS 

Google Scholar 
Ruban, V., Brigault, S., Demare, D. & Philippe, A. M. An investigation of the origin and mobility of phosphorus in freshwater sediments from Bort-Les-Orgues reservoir, France. J. Environ. Monit. 1, 403–407 (1999).Article 
CAS 

Google Scholar 
Ruban, V., López-Sánchez, J. F. & Pardo, P. Harmonized protocol and certified reference material for the determination of extractable contents of phosphorus in freshwater sediments: A synthesis of recent works. Fresenius J. Anal. Chem. 370, 224–228 (2001).Article 
CAS 

Google Scholar 
Li, Y., Zhang, J. Q., Gong, Z. L., Fu, W. L. & Wu, D. M. Fractions and temporal and spatial distribution of phosphorus in the sediments of Sancha lake. Appl. Ecol. Environ. Res. 17, 11731–11743 (2019).Article 

Google Scholar 
Li, Y., Zhang, J. Q., Gong, Z. L., Xu, W. L. & Mou, Z. S. Gcd gene diversity of quinoprotein glucose dehydrogenase in the sediment of Sancha lake and its response to the environment. Int. J. Environ. Res. Public Health 16, 1–10 (2019).Article 

Google Scholar 
Luo, G. W. et al. Long-term fertilisation regimes affect the composition of the alkaline phosphomonoesterase encoding microbial community of a vertisol and its derivative soil fractions. Biol. Fertil. Soils 53, 375–388 (2017).Article 
CAS 

Google Scholar 
Lagos, L. et al. Effect of phosphorus addition on total and alkaline phosphomonoesterase-harboring bacterial populations in ryegrass rhizosphere microsites. Biol. Fertil. Soils 52, 1007–1019 (2016).Article 
CAS 

Google Scholar 
Acuña, J. et al. Bacterial alkaline phosphomono-esterase in the rhizospheres of plants grown in chilean extreme environments. Biol. Fertil. Soils 52, 763–773 (2016).Article 

Google Scholar 
Nicholas, A. B. et al. Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing. Nat. Methods. 10, 57–59 (2013).Article 

Google Scholar 
Price, M. N., Dehal, P. S. & Arkin, A. P. FastTree: Computing large minimum evolution trees with profiles instead of a distance matrix. Mol. Biol. Evol. 26, 1641–1650 (2009).Article 
CAS 

Google Scholar 
Fan, X. F. & Xing, P. The vertical distribution of sediment archaeal community in the (black bloom) disturbing Zhushan Bay of Lake Taihu. Archaea 2016, 201–208 (2016).Article 

Google Scholar 
White, J. R., Nagarajan, N. & Pop, M. O. Statistical methods for detecting differentially abundant features in clinical metagenomic samples (differential abundance in clinical metagenomics). PLoS Comput. Biol. 5, 1–11 (2009).Article 

Google Scholar 
Hu, H., Chen, X. J., Hou, F. J., Wu, Y. P. & Cheng, Y. X. Bacterial and fungal community structures in loess plateau grasslands with different grazing intensities. Front. Microbiol. 8, 606 (2017).Article 

Google Scholar 
Dai, J. Y. et al. Bacterial alkaline phosphatases and affiliated encoding genes in natural waters: A review. J. Lake Sci. 28, 1153–1166 (2016).Article 

Google Scholar 
Chróst, R. J. & Overbeck, J. Kinetics of alkaline phosphatase activity and phosphorus availability for phytoplankton and bacterio-plankton in lake plusee (North German Eutrophic Lake). Microb. Ecol. 13, 229–248 (1987).Article 

Google Scholar 
Margalef, O. et al. Global patterns of phosphatase activity in natural soils. Sci. Rep. 7, 1337 (2017).Article 
ADS 
CAS 

Google Scholar 
Zhao, D. D., Luo, J. F., Huang, X. Y. & Lin, W. T. Diversity of bacterial APase phoD gene in the Pearl River water. Acta Sci. Circum. 35, 722–728 (2015).CAS 

Google Scholar 
Valdespino-Castillo, P. M. et al. Alkaline phosphatases in microbialites and bacterioplankton from Alchichica soda lake, Mexico. FEMS Microbiol. Ecol. 90, 504–519 (2014).CAS 

Google Scholar 
Ni, Z. K., Li, Y. & Wang, S. R. Cognizing and characterizing the organic phosphorus in lake sediments: Advances and challenges. Water Res. 220, 118663 (2022).Article 
CAS 

Google Scholar 
Han, S. S. & Wen, T. M. Phosphorus release and affecting factors in the sediments of eutrophic water. J. Ecol. 23, 98–101 (2004).
Google Scholar 
Wang, F. F., Qu, J. H. & Hu, Y. S. Spatio-temporal characteristics and correlation of phosphate, pH and alkaline phosphatase on water-sediment interface of Lake Taihu. Ecol. Environ. Sci. 21, 907–912 (2012).
Google Scholar 
Lu, Y. M. et al. Bioavailability of organic phosphorus in Lake Chaohu sediments. J. Environ. Eng. Technol. 10, 197–204 (2020).
Google Scholar 
LeBrun, E. S., King, R. S., Back, J. A. & Kang, S. Microbial community structure and function decoupling across a phosphorus gradient in streams. Microb. Ecol. 75, 64–73 (2018).Article 
CAS 

Google Scholar 
Zhang, J. et al. Connecting sources, fractions and algal availability of sediment phosphorus in shallow lakes: An approach to the criteria for sediment phosphorus concentrations. J. Environ. Sci. 25, 798–810 (2023).Article 

Google Scholar 
Hu, Y. J. et al. Effects of long-term fertilization on phoD-harboring bacterial community in Karst soils. Sci. Total Environ. 628–629, 53–63 (2018).Article 
ADS 

Google Scholar  More

Hatton, P. J., Castanha, C., Torn, M. S. & Bird, J. A. Litter type control on soil C and N stabilization dynamics in a temperate forest. Glob. Change Biol. 21(3), 1358–1367. https://doi.org/10.1111/gcb.12786 (2015).Article 
ADS 

Google Scholar 
Lladó, S., López-Mondéjar, R. & Baldrian, P. Forest soil bacteria: Diversity, involvement in ecosystem processes, and response to global change. Microbiol. Mol. Biol. Rev. 81(2), e00063–16. https://doi.org/10.1128/mmbr.00063-16 (2017).Article 
CAS 

Google Scholar 
Ranjard, L. & Richaume, A. Quantitative and qualitative microscale distribution of bacteria in soil. Res. Microbiol. 152(8), 707–716. https://doi.org/10.1016/S0923-2508(01)01251-7 (2001).Article 
CAS 

Google Scholar 
Nannipieri, P., Badalucco, L., Benbi, D. K., & Nieder, R. Handbook of processes and modelling in the soil-plant system. Biological Processes, 57–82 (2003).Wixon, D. L. & Balser, T. C. Complexity, climate change and soil carbon: A systems approach to microbial temperature response. Syst. Res. Behav. Sci. 26(5), 601–620. https://doi.org/10.1002/sres.995 (2009).Article 

Google Scholar 
Van Der Heijden, M. G., Bardgett, R. D. & Van Straalen, N. M. The unseen majority: Soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems. Ecol. Lett. 11(3), 296–310. https://doi.org/10.1111/j.1461-0248.2007.01139.x (2008).Article 

Google Scholar 
Tisdall, J. M. Possible role of soil microorganisms in aggregation in soils. Plant Soil 159, 115–121. https://doi.org/10.1007/BF00000100 (1994).Article 

Google Scholar 
Ingham, E. R. Soil biology primer, Chapter 4: Soil fungus. Soil and Water Conservation 22–23 (Soil and Water Conservation Society, 2009).
Google Scholar 
Stevens, W. B., Sainju, U. M., Caesar, A. J., West, M. & Gaskin, J. F. Soil-aggregating bacterial community as affected by irrigation, tillage, and cropping system in the northern great plains. Soil Sci. 179(1), 11–20 (2014).Article 
ADS 

Google Scholar 
Islam, K. R. Lecture on Soil Physics, Personal Collection of K. Islam (Ohio State University, 2008).
Google Scholar 
López-Mondéjar, R., Zühlke, D., Becher, D., Riedel, K. & Baldrian, P. Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems. Sci. Rep. 6(1), 25279. https://doi.org/10.1038/srep25279 (2016).Article 
ADS 
CAS 

Google Scholar 
Wardle, D. A., Nilsson, M. C. & Zackrisson, O. Fire-derived charcoal causes loss of forest humus. Science 320(5876), 629–629. https://doi.org/10.1126/science.1154960 (2008).Article 
ADS 
CAS 

Google Scholar 
Shelobolina, E., Roden, E., Benzine, J. & Xiong, M. Y. Using phyllosilicate-Fe (II)-oxidizing soil bacteria to improve Fe and K plant nutrition. U.S. Patent Application 14/924,397 (Wisconsin Alumni Research Foundation, 2016).
Google Scholar 
Kumar, A., & Verma, J. P. The role of microbes to improve crop productivity and soil health. In Ecological Wisdom Inspired Restoration Engineering 249–265. https://doi.org/10.1007/978-981-13-0149-0_14 (2019).Dick, W. Lecture on Biochemistry Process in Soil Microbiology, Personal Collection of W. Dick (The Ohio State University School of Environment and Natural Resources, 2009).
Google Scholar 
Reed, S. C., Cleveland, C. C. & Townsend, A. R. Functional ecology of free-living nitrogen fixation: A contemporary perspective. Annu. Rev. Ecol. Evol. Syst. 42, 489–512. https://doi.org/10.1146/annurev-ecolsys-102710-145034 (2011).Article 

Google Scholar 
Sylvia, D. M., Fuhrmann, J. J., Hartel, P. G. & Zuberer, D. A. Principles and Applications of Soil Microbiology (No. QR111 S674 2005) 2nd edn. (Prentice Hall, 2005).
Google Scholar 
Torsvik, V., Daae, F. L., Sandaa, R. A. & Øvreås, L. Novel techniques for analysing microbial diversity in natural and perturbed environments. J. Biotechnol. 64(1), 53–62. https://doi.org/10.1016/s0168-1656(98)00103-5 (1998).Article 
CAS 

Google Scholar 
Roesch, L. F. W. et al. Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J. 1(4), 283–290. https://doi.org/10.1038/ismej.2007.53 (2007).Article 
CAS 

Google Scholar 
Rousk, J., Brookes, P. C. & Bååth, E. The microbial PLFA composition as affected by pH in an arable soil. Soil Biol. Biochem. 42(3), 516–520. https://doi.org/10.1016/j.soilbio.2009.11.026 (2010).Article 
CAS 

Google Scholar 
Brockett, B. F., Prescott, C. E. & Grayston, S. J. Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada. Soil Biol. Biochem. 44(1), 9–20. https://doi.org/10.1016/j.soilbio.2011.09.003 (2012).Article 
CAS 

Google Scholar 
Urbanová, M., Šnajdr, J. & Baldrian, P. Composition of fungal and bacterial communities in forest litter and soil is largely determined by dominant trees. Soil Biol. Biochem. 84, 53–64. https://doi.org/10.1016/j.soilbio.2015.02.011 (2015).Article 
CAS 

Google Scholar 
Binkley, D. & Vitousek, P. M. Soil nutrient availability. In Plant Physiological, Field Methods and Instrumentation (eds Pearey, R. W. et al.) 75–96 (Champan and Hall, 1989).Chapter 

Google Scholar 
Ruess, J. O. & Innis, G. S. A grassland nitrogen flow simulation mode. Ecology 58, 348–429. https://doi.org/10.2307/1935612 (1977).Article 

Google Scholar 
Kumar, M., Sharma, C. M. & Rajwar, G. S. Physico-chemical properties of forest soil along altitudinal gradient in Garhwal Himalaya. J. Hill Res. 17(2), 60–64 (2004).
Google Scholar 
Smit, E. et al. Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl. Environ. Microbiol. 67(5), 2284–2291. https://doi.org/10.1128/AEM.67.5.2284-2291.2001 (2001).Article 
ADS 
CAS 

Google Scholar 
Qazi, P. H. Bioprospecting Himalayan microbial diversity. ENVIS Newsletter on Himalayan Ecology 12(4). http://gbpihedenvis.nic.in/ENVIS%20Newsletter/vol%2012(4).pdf (2015).Pradhan, S. et al. Bacterial biodiversity from Roopkund glacier, Himalayan Mountain ranges, India. Extremophiles 14, 377–395. https://doi.org/10.1007/s00792-010-0318-3 (2010).Article 
CAS 

Google Scholar 
Shivaji, S. et al. Bacterial diversity of soil in the vicinity of Pindari glacier, Himalayan Mountain ranges, India, using culturable bacteria and soil 16S rRNA gene clones. Extremophiles 15, 1–22. https://doi.org/10.1007/s00792-010-0333-4 (2011).Article 
CAS 

Google Scholar 
Das, J. & Dangar, T. K. Microbial population dynamics, especially stress tolerant Bacillus thuringiensis, in partially anaerobic rice field soils during post-harvest period of the Himalayan, island, brackish water and coastal habitats of India. World J. Microbiol. Biotechnol. 24, 1403–1410. https://doi.org/10.1007/s11274-007-9620-3 (2008).Article 

Google Scholar 
Lyngwi, N. A., Koijam, K., Sharma, D. & Joshi, S. R. Cultivable bacterial diversity along the altitudinal zonation and vegetation range of tropical Eastern Himalaya. Rev. Biol. Trop. 61(1), 467–490. https://doi.org/10.15517/rbt.v61i1.11141 (2013).Article 

Google Scholar 
Pandey, S., Singh, S., Yadav, A. N., Nain, L. & Saxena, A. K. Phylogenetic diversity and characterization of novel and efficient cellulase producing bacterial isolates from various extreme environments. Biosci. Biotechnol. Biochem. 77(7), 1474–1480. https://doi.org/10.1271/bbb.130121 (2013).Article 
CAS 

Google Scholar 
Venkatachalam, S., Gowdaman, V. & Prabagaran, S. R. Culturable and culture-independent bacterial diversity and the prevalence of cold-adapted enzymes from the Himalayan Mountain ranges of India and Nepal. Microb. Ecol. 69, 472–491. https://doi.org/10.1007/s00248-014-0476-4 (2015).Article 
CAS 

Google Scholar 
Saxena, A. K., Yadav, A. N., Kaushik, R., Tyagi, S. P., & Shukla, L. Biotechnological applications of microbes isolated from cold environments in agriculture and allied sectors. In International Conference on Low Temperature Science and Biotechnological Advances, Vol. 104 (Society of Low Temperature Biology, 2015).Singh, R. N. et al. First high-quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77. Stand. Genom. Sci. 11, 1–9. https://doi.org/10.1186/s40793-016-0176-4 (2016).Article 
CAS 

Google Scholar 
Mushtaq, H. et al. Biochemical characterization and functional analysis of heat stable high potential protease of Bacillus amyloliquefaciens strain HM48 from soils of Dachigam National Park in Kashmir Himalaya. Biomolecules 11(1), 117. https://doi.org/10.3390/biom11010117 (2021).Article 
CAS 

Google Scholar 
Maharana, A. K. & Ray, P. Isolation and screening of cold active extracellular enzymes producing psychrotrophic bacteria from soil of Jammu City. Biosci. Biotechnol. Res. Asia 10(1), 267–273. https://doi.org/10.13005/bbra/1120 (2013).Article 

Google Scholar 
Rehakova, K., Chlumska, Z. & Dolezal, J. Soil cyanobacterial and microalgal diversity in dry mountains of Ladakh, NW Himalaya, as related to site, altitude, and vegetation. Microb. Ecol. 62, 337–346. https://doi.org/10.1007/s00248-011-9878-8 (2011).Article 
CAS 

Google Scholar 
Rehakova, K. et al. Bacterial community of cushion plant Thylacospermum ceaspitosum on elevational gradient in the Himalayan cold desert. Front. Microbiol. 6, 304. https://doi.org/10.3389/fmicb.2015.00304 (2015).Article 

Google Scholar 
Gupta, P. & Vakhlu, J. Culturable bacterial diversity and hydrolytic enzymes from Drass, a cold desert in India. Afr. J. Microbiol. Res. 9, 1866–1876. https://doi.org/10.5897/AJMR2015.7424 (2015).Article 

Google Scholar 
Yadav, A. N. et al. Culturable diversity and functional annotation of psychrotrophic bacteria from cold desert of Leh Ladakh (India). World J. Microbiol. Biotechnol. 31, 95–108. https://doi.org/10.1007/s11274-014-1768-z (2015).Article 
CAS 

Google Scholar 
Farooq, S., Nazir, R., Ganai, B. A., Mushtaq, H. & Dar, G. J. Psychrophilic and psychrotrophic bacterial diversity of Himalayan Thajwas glacial soil, India. Biologia 77, 203–213. https://doi.org/10.1007/s11756-021-00915-6 (2022).Article 
CAS 

Google Scholar 
Ahmad, N., Johri, S., Abdin, M. Z. & Qazi, G. N. Molecular characterization of bacterial population in the forest soil of Kashmir, India. World J. Microbiol. Biotechnol. 25, 107–113. https://doi.org/10.1007/s11274-008-9868-2 (2009).Article 
CAS 

Google Scholar 
Thakur, D., Yadav, A., Gogoi, B. K. & Bora, T. C. Isolation and screening of Streptomyces in soil of protected forest areas from the states of Assam and Tripura, India, for antimicrobial metabolites. J. Mycol. Méd. 17(4), 242–249. https://doi.org/10.1016/j.mycmed.2007.08.001 (2007).Article 

Google Scholar 
Rina, K., Hiral, P., Payal, P., Dharaiya, N. & Patel, R. K. Study on microbial diversity of Wild Ass Sanctuary, Little Rann of Kutch, Gujarat, India. ICFAI Univ. J. Life Sci. 3(1), 34–41 (2009).
Google Scholar 
Das, S., Saikia, P., Baruah, P. P. & Chakraborty, A. Isolation and identification of soil bacteria collected from Dibru-Saikhowa, the National Park and Biosphere Reserve Forest of Assam, India. Int. J. Sci. Res. (IJSR), 1937–1940 (2016).De Mandal, S., Lalremsanga, H. T. & Kumar, N. S. Bacterial diversity of Murlen National Park located in Indo-Burman Biodiversity hotspot region: A metagenomic approach. Genom. Data 5, 25–26. https://doi.org/10.1016/j.gdata.2015.04.025 (2015).Article 

Google Scholar 
Megha, B., Sejal, P., Puja, P. & Jasrai, Y. T. Isolation and identification of soil microflora of national parks of Gujarat, India. Int. J. Curr. Microbiol. Appl. Sci. 4(3), 421–429 (2015).
Google Scholar 
Kumar, A., Singh, R. D., Patra, A. K., Sahu, S. K. & Singh, M. Impact of oak and pine canopy cover on soil biochemical and microbial indicators of Binsar Wildlife Sanctuary in the Western Himalaya, India. J. Pure Appl. Microbiol. 11(3), 1599–1607. https://doi.org/10.22207/JPAM.11.3.47 (2017).Article 
CAS 

Google Scholar 
Dhiman, P., Mehta, J. P., Singh, P. & andSharesthBaldotra, S. S.,. Effect of prescribe fire on bacterial abundance and their enzymatic activity in burnt and unburnt soil of Chilla Forest, Raja Ji National Park, Uttarakhand, India. Plant Arch. 18(1), 1125–1128 (2018).
Google Scholar 
Behera, P. et al. Spatial and temporal heterogeneity in the structure and function of sediment bacterial communities of a tropical mangrove forest. Environ. Sci. Pollut. Res. 26, 3893–3908 (2019).Article 
CAS 

Google Scholar 
Sharma, P. & Thakur, D. Antimicrobial biosynthetic potential and diversity of culturable soil actinobacteria from forest ecosystems of Northeast India. Sci. Rep. 10(1), 1–18. https://doi.org/10.1038/s41598-020-60968-6 (2020).Article 
CAS 

Google Scholar 
Dar, G. H., Bhagat, R. C. & Khan, M. A. Biodiversity of the Kashmir Himalaya (Valley Book House, 2002).
Google Scholar 
Shameem, S. A., Kangroo, N. I. & Bhat, G. A. Comparative assessment of edaphic features and herbaceous diversity in lower Dachigam national park, Kashmir, Himalaya. J. Ecol. Nat. Environ. 3(6), 196–204 (2011).
Google Scholar 
Thakur, M., Sharma, L. K., Charoo, S. A. & Sathyakumar, S. Conflict bear translocation: Investigating population genetics and fate of bear translocation in Dachigam National Park, Jammu and Kashmir, India. PLoS One 10, e0132005. https://doi.org/10.1371/journal.pone.0132005 (2015).Article 
CAS 

Google Scholar 
Ahmad, K., Qureshi, Q., Agoramoorthy, G. & Nigam, P. Habitat use patterns and food habits of the Kashmir red deer or Hangul (Cervus elaphus hanglu) in Dachigam National Park, Kashmir, India. Ethol. Ecol. Evol. 28(1), 85–101. https://doi.org/10.1080/03949370.2015.1018955 (2016).Article 

Google Scholar 
Jammu and Kashmir Forest Department (JKFD). Handbook of Forest Statistics (Jammu and Kashmir Forest Department, 2011).
Google Scholar 
Anderson, J. M. & Ingram, J. S. I. A Handbook of Methods 62–65 (CAB International, 1993).
Google Scholar 
Joshi, S. R., Chauhan, M. A. N. J. U., Sharma, G. D. & Mishra, R. R. Effect of deforestation on microbes, VAM fungi and their enzymatic activity in Eastern Himalaya. In Studies in Himalayan Ecobiology 141–152 (Today and Tommorows Publication, 1991).
Google Scholar 
Jackson, M. L. Soil Chemical Analysis 151–154 (Prentice-Hall, 1958). https://doi.org/10.1002/jpln.19590850311.Book 

Google Scholar 
Gardner, W. H. Water content. Methods of soil analysis: Part 1. Phys. Mineral. Methods 5, 493–544 (1986).
Google Scholar 
Walkley, A. & Black, I. A. Estimation of soil organic carbon by the chromic acid titration method. Soil Sci. 37(1), 29–38 (1934).Article 
ADS 
CAS 

Google Scholar 
Bremner, J. M. Determination of nitrogen in soil by the Kjeldahl method. J. Agric. Sci. 55(1), 1–23 (1960).Article 

Google Scholar 
Coursey, D. G. & Eggins, H. O. W. Microorganismes responsables de l’altération de l’huile de palme pendant le stockage. Oléagineux 16, 227–233 (1961).CAS 

Google Scholar 
Kumar, R., Acharya, C. & Joshi, S. R. Isolation and analyses of uranium tolerant Serratia marcescens strains and their utilization for aerobic uranium U (VI) bioadsorption. J. Microbiol. 49, 568–574. https://doi.org/10.1007/s12275-011-0366-0 (2011).Article 
CAS 

Google Scholar 
Team, R. C. R: A language and environment for statistical computing. https://www.R-project.org (R Foundation for Statistical Computing, 2017).Bergey, D. H. & Holt, J. G. Bergey’s Manual of Determinative Bacteriology (Lippincott Williams & Wilkins, 1994).
Google Scholar 
Gürtler, V. & Stanisich, V. A. New approaches to typing and identification of bacteria using the 16S–23S rDNA spacer region. Microbiology 142(1), 3–16 (1996).Article 

Google Scholar 
Hammer, Ø., Harper, D. A. T. & Ryan, P. D. PAST: Paleontological statistics software package for education and data analysis. Palaeontol. Electron. 4, 1–9 (2001).
Google Scholar 
Sorensen, T. A. A method of establishing groups of equal amplitude in plant sociology based on similarity of species content and its application to analyses of the vegetation on Danish commons. Biol. Skar. 5, 1–34 (1948).
Google Scholar 
Muhumuza, M. & Balkwill, K. Factors affecting the success of conserving biodiversity in national parks: A review of case studies from Africa. Int. J. Biodivers. https://doi.org/10.1155/2013/798101 (2013).Article 

Google Scholar 
Yaqoob, A., Yunus, M., Bhat, G. A. & Singh, D. P. Phytodiversity and seasonal variations in the soil characteristics of shrublands of Dachigam National Park, Jammu and Kashmir, India. Clim. Change Environ. Sustain. 3(2), 137–143. https://doi.org/10.5958/2320-642X.2015.00015.0 (2015).Article 

Google Scholar 
Mir, Z. R., Noor, A., Habib, B. & Veeraswami, G. G. Seasonal population density and winter survival strategies of endangered Kashmir gray langur (Semnopithecus ajax) in Dachigam National Park, Kashmir, India. Springer Plus 4, 1–8. https://doi.org/10.1186/s40064-015-1366-z (2015).Article 
CAS 

Google Scholar 
Buchan, G. D. Soil temperature regime. In Soil and Environmental Analysis: Physical Methods (eds Smith, K. A. & Mullins, C.) 539–594 (Marcel Dekker, 2001).
Google Scholar 
Buchan, G. D. Temperature effects in soil. In Encyclopedia of Agrophysics, Encyclopedia of Earth Sciences Series (Springer, 2011).
Google Scholar 
Chiemeka, I. U. Soil temperature profile at Uturu, Nigeria. Pac. J. Sci. Technol. 11(1), 478–482 (2010).
Google Scholar 
Decker, K. L. M., Wang, D., Waite, C. & Scherbatskoy, T. Snow removal and ambient air temperature effects on forest soil temperatures in northern Vermont. Soil Sci. Soc. Am. J. 67(4), 1234–1242. https://doi.org/10.2136/sssaj2003.1234 (2003).Article 
ADS 
CAS 

Google Scholar 
Abu-Hamdeh, N. H. & Reeder, R. C. Soil thermal conductivity effects of density, moisture, salt concentration, and organic matter. Soil Sci. Soc. Am. J. 64(4), 1285–1290. https://doi.org/10.2136/sssaj2000.6441285x (2000).Article 
ADS 
CAS 

Google Scholar 
Lu, S., Ren, T., Gong, Y. & Horton, R. An improved model for predicting soil thermal conductivity from water content at room temperature. Soil Sci. Soc. Am. J. 71(1), 8–14. https://doi.org/10.2136/sssaj2006.0041 (2007).Article 
ADS 
CAS 

Google Scholar 
Elizbarashvili, E. S., Urushadze, T. F., Elizbarashvili, M. E., Elizbarashvili, S. E. & Schaefer, M. K. Temperature regime of some soil types in Georgia. Eurasian Soil Sci. 43(4), 427–435. https://doi.org/10.1134/S1064229310040083 (2010).Article 
ADS 

Google Scholar 
Walter, H. & Burnett, J. H. Ecology of Tropical and Subtropical Vegetation Vol. 539, xviii+-539 (Oliver and Boyd, 1971).
Google Scholar 
Callaway, R. M. Positive interactions and interdependence in plant communities. Springer Science Business Media https://doi.org/10.1007/978-1-4020-6224-7 (2007).Article 

Google Scholar 
Song, Y. et al. Effects of vegetation height and density on soil temperature variations. Chin. Sci. Bull. 58(8), 907–912. https://doi.org/10.1007/s11434-012-5596-y (2013).Article 

Google Scholar 
Dimri, B. M., Singh, S. B., Baneriee, S. K. & Singh, B. Relation of age and dominance of tree species with soil chemical attributes in Kalimpong and Kurseong District of West Bengal. Indian For. 113(4), 307–311 (1987).
Google Scholar 
Jackson, R. B., Mooney, H. A. & Schulze, E. D. A global budget for fine root biomass, surface area, and nutrient contents. Proc. Natl. Acad. Sci. 94(14), 7362–7366. https://doi.org/10.1073/pnas.94.14.7362 (1997).Article 
ADS 
CAS 

Google Scholar 
Wilson, S. D. Competition between grasses and woody plants. In Population Biology of Grasses (ed. Cheplick, G. P.) 231–254 (Cambridge University Press, 1998).Chapter 

Google Scholar 
Reth, S., Reichstein, M. & Falge, E. The effect of soil water content, soil temperature, soil pH-value and the root mass on soil CO2 efflux—A modified model. Plant Soil 268, 21–33. https://doi.org/10.1007/s11104-005-0175-5 (2005).Article 
CAS 

Google Scholar 
Zinke, P. J. The pattern of influence of individual forest trees on soil properties. Ecology 43(1), 130–133 (1962).Article 

Google Scholar 
Patric, J. H. Forest management and nutrient cycling in eastern hardwoods Vol. 324 (Forest Service, US Department of Agriculture, Northeastern Forest Experiment Station, 1975).
Google Scholar 
Mroz, G. D., Jurgensen, M. F. & Frederick, D. J. Soil nutrient changes following whole tree harvesting on three northern hardwood sites. Soil Sci. Soc. Am. J. 49(6), 1552–1557. https://doi.org/10.2136/sssaj1985.03615995004900060044x (1985).Article 
ADS 

Google Scholar 
Maggs, J. & Hewett, B. Organic C and nutrients in surface soils from some primary rainforests, derived grasslands and secondary rainforests on the Atherton Tableland in North East Queensland. Soil Res. 31(3), 343–350 (1993).Article 
CAS 

Google Scholar 
Hart, S. C. & Perry, D. A. Transferring soils from high-to low-elevation forests increases nitrogen cycling rates: Climate change implications. Glob. Change Biol. 5(1), 23–32 (1999).Article 
ADS 

Google Scholar 
Atlas, R. M. Diversity of microbial communities. Adv. Microb. Ecol., 1–47 (1984).Dimitriu, P. A. & Grayston, S. J. Relationship between soil properties and patterns of bacterial β-diversity across reclaimed and natural boreal forest soils. Microb. Ecol. 59, 563–573. https://doi.org/10.1007/s00248-009-9590-0 (2010).Article 

Google Scholar 
Bele, S. S. Soil Testing and Soil Microbiology 79–108 (Satyam Publishers and Distributors, 2014). https://doi.org/10.1007/s11356-018-3927-5.Book 

Google Scholar 
Cattelan, A. J., Hartel, P. G. & Fuhrmann, J. J. Bacterial composition in the rhizosphere of nodulating and non-nodulating soybean. Soil Sci. Soc. Am. J. 62(6), 1549–1555. https://doi.org/10.2136/sssaj1998.03615995006200060011x (1998).Article 
ADS 
CAS 

Google Scholar 
Silva, P. D. & Nahas, E. Bacterial diversity in soil in response to different plans, phosphate fertilizers and liming. Braz. J. Microbiol. 33, 304–310 (2002).Article 

Google Scholar 
Begum, K. et al. Isolation and characterization of bacteria with biochemical and pharmacological importance from soil samples of Dhaka City. Dhaka Univ. J. Pharm. Sci. 16(1), 129–136. https://doi.org/10.3329/dujps.v16i1.33390 (2017).Article 

Google Scholar 
Liu, D., Liu, Y., Fang, S. & Tian, Y. Tree species composition influenced microbial diversity and nitrogen availability in rhizosphere soil. Plant Soil Environ. 61(10), 438–443. https://doi.org/10.17221/94/2015-PSE (2015).Article 
CAS 

Google Scholar 
Chodak, M., Klimek, B., Azarbad, H. & Jaźwa, M. Functional diversity of soil microbial communities under Scots pine, Norway spruce, silver birch and mixed boreal forests. Pedobiologia 58(2–3), 81–88 (2015).Article 

Google Scholar 
Gartzia-Bengoetxea, N., Kandeler, E., de Arano, I. M. & Arias-González, A. Soil microbial functional activity is governed by a combination of tree species composition and soil properties in temperate forests. Appl. Soil. Ecol. 100, 57–64 (2016).Article 

Google Scholar 
Shameem, S. A., Mushtaq, H., Wani, A. A., Ahmad, N. & Hai, A. Phytodiversity of herbaceous vegetation in disturbed and undisturbed forest ecosystems of Pahalgam valley, Kashmir Himalaya, India. Br. J. Environ. Clim. Change 7(3), 148–167 (2017).Article 

Google Scholar 
Felske, A., Wolterink, A., Van Lis, R. & Akkermans, A. D. Phylogeny of the main bacterial 16S rRNA sequences in Drentse A grassland soils (The Netherlands). Appl. Environ. Microbiol. 64(3), 871–879. https://doi.org/10.1128/aem.64.3.871-879.1998 (1998).Article 
ADS 
CAS 

Google Scholar 
Chodak, M., Gołębiewski, M., Morawska-Płoskonka, J., Kuduk, K. & Niklińska, M. Soil chemical properties affect the reaction of forest soil bacteria to drought and rewetting stress. Ann. Microbiol. 65, 1627–1637. https://doi.org/10.1007/s13213-014-1002-0 (2015).Article 
CAS 

Google Scholar 
Lugo, M. A. et al. Arbuscular mycorrhizal fungi and rhizospheric bacteria diversity along an altitudinal gradient in South American Puna grassland. Microb. Ecol. 55, 705–713. https://doi.org/10.1007/s00248-007-9313-3 (2008).Article 
CAS 

Google Scholar 
Wang, Q., Wang, S., Fan, B. & Yu, X. Litter production, leaf litter decomposition and nutrient return in Cunninghamia lanceolata plantations in south China: Effect of planting conifers with broadleaved species. Plant Soil 297, 201–211. https://doi.org/10.1007/s11104-007-9333-2 (2007).Article 
CAS 

Google Scholar 
Nüsslein, K. & Tiedje, J. M. Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil. Appl. Environ. Microbiol. 65(8), 3622–3626. https://doi.org/10.1128/aem.65.8.3622-3626.1999 (1999).Article 
ADS 

Google Scholar 
Hackl, E., Zechmeister-Boltenstern, S., Bodrossy, L. & Sessitsch, A. Comparison of diversities and compositions of bacterial populations inhabiting natural forest soils. Appl. Environ. Microbiol. 70(9), 5057–5065. https://doi.org/10.1128/AEM.70.9.5057-5065.2004 (2004).Article 
ADS 
CAS 

Google Scholar 
Chan, C. et al. Vegetation cover of forest, shrub and pasture strongly influences soil bacterial community structure as revealed by 16S rRNA gene T-RFLP analysis. FEMS Microbiol. Ecol. 64(3), 449–458. https://doi.org/10.1111/j.1574-6941.2008.00488.x (2008).Article 
CAS 

Google Scholar 
Adamczyk, B., Kitunen, V. & Smolander, A. Protein precipitation by tannins in soil organic horizon and vegetation in relation to tree species. Biol. Fertil. Soils 45(1), 55–64. https://doi.org/10.1007/s00374-008-0308-0 (2008).Article 
CAS 

Google Scholar 
Kanerva, S., Kitunen, V., Loponen, J. & Smolander, A. Phenolic compounds and terpenes in soil organic horizon layers under silver birch, Norway spruce and Scots pine. Biol. Fertil. Soils 44(4), 547–556. https://doi.org/10.1007/s00374-007-0234-6 (2008).Article 
CAS 

Google Scholar 
Ushio, M., Balser, T. C. & Kitayama, K. Effects of condensed tannins in conifer leaves on the composition and activity of the soil microbial community in a tropical montane forest. Plant Soil 365(1), 157–170. https://www.jstor.org/stable/42952341 (2013).Lomolino, M. V. Elevation gradients of species-density: Historical and prospective views. Glob. Ecol. Biogeogr. 10(1), 3–13. https://doi.org/10.1046/j.1466-822x.2001.00229.x (2001).Article 

Google Scholar 
Thomson, B. C. et al. Vegetation affects the relative abundances of dominant soil bacterial taxa and soil respiration rates in an upland grassland soil. Microb. Ecol. 59(2), 335–343. https://doi.org/10.1007/s00248-009-9575-z (2010).Article 

Google Scholar 
May, R. M. Patterns of species abundance and diversity. In Ecology and Evolution of Communities (eds Cody, M. L. & Diamond, J. M.) 81–120 (Harvard University, 1975).
Google Scholar 
Kapur, M. & Jain, R. K. Microbial diversity: Exploring the unexplored. World Federation of Culture Collection Newsletter 39, 12–16 (2004).
Google Scholar 
Bryant, J. A. et al. Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity. Proc. Natl. Acad. Sci. 105(Suppl 1), 11505–11511 (2008).Article 
ADS 
CAS 

Google Scholar 
Fierer, N. et al. Microbes do not follow the elevational diversity patterns of plants and animals. Ecology 92(4), 797–804. https://doi.org/10.1890/10-1170.1 (2011).Article 

Google Scholar  More

Benson, E. S. Sci. Context 29, 107–128 (2016).Article 
PubMed 

Google Scholar 
Buckmaster, C. A. Lab Anim. 44, 237 (2015).Article 

Google Scholar 
Kelly, M. J. et al. J. Zool. 244, 473–488 (1998).Article 

Google Scholar 
Spagnuolo, O. S. B., Lemerle, M. A., Holekamp, K. E. & Wiesel, I. Mamm. Biol. https://doi.org/10.1007/s42991-022-00309-4 (2022).Article 
PubMed 
PubMed Central 

Google Scholar 
California Department of Fish and Wildlife. Mountain lion P-22 compassionately euthanized following complete health evaluation results. wildlife.ca.gov, https://wildlife.ca.gov/News/mountain-lion-p-22-compassionately-euthanized-following-complete-health-evaluation-results (17 December 2022).Road Ecology Center, UC Davis. California roadkill observation system, https://www.wildlifecrossing.net/california/ (accessed 19 December 2022).Wong-Parodi, G. & Feygina, I. Environ. Commun. 15, 571–593 (2021).Article 

Google Scholar 
Carmi, N., Arnon, S. & Orion, N. J. Environ. Educ. 46, 183–201 (2015).Article 

Google Scholar 
Manfredo, M. J., Urquiza-Haas, E. G., Don Carlos, A. W., Bruskotter, J. T. & Dietsch, A. M. Biol. Conserv. 241, 108297 (2020).Article 

Google Scholar 
Schueler, D. S. & Newberry, M. G. III Appl. Environ. Educ. Commun. 19, 259–273 (2020).Article 

Google Scholar 
Jennings, L. Public gets to name Dallas Zoo’s baby giraffe. Dallas Zoo https://zoohoo.dallaszoo.com/2014/11/05/public-gets-to-name-dallas-zoos-baby-giraffe/ (5 November 2014).Verma, A., van der Wal, R. & Fischer, A. Ambio 44(Suppl 4), 648–660 (2015).Article 
PubMed 
PubMed Central 

Google Scholar 
Macdonald, D. W., Jacobsen, K. S., Burnham, D., Johnson, P. J. & Loveridge, A. J. Animals 6, 26 (2016).Article 
PubMed 
PubMed Central 

Google Scholar 
Jones, M. D., Shanahan, E. A. & McBeth, M. K. The Science of Stories: Applications of the Narrative Policy Framework in Public Policy Analysis (Palgrave MacMillan, 2014). More

Animal collection and holding for this project was conducted under Marine Research Permit RE-19–28 issued by the Ministry of Natural Resources, Environment, and Tourism of the Republic of Palau (10.03.2019), Marine Research/Collection Permit and Agreement 62 issued by the Koror State Government (08.10.2019), Queensland Government GBRMPA Marine Parks Permit G14/36689.1, Queensland Government DNPRSR Marine Parks Permits QS2014/MAN247 and QS2014/MAN247a, Queensland Government General Fisheries Permit 168991, Queensland Government DAFF Animal Ethics approval CA2013/11/733, approval by The Bahamas Department of Marine Resources, approval by the Animal Care Officer of both the University of Bremen and the Leibniz Centre for Tropical Marine Research (ZMT), and in accordance with UK and Germany animal care guidelines.Sample collectionWe collected fish carbonate samples at four study locations across three tropical and subtropical regions: Eleuthera (24°50’N, 76°20’W), The Bahamas, between 2009 and 201127,37; Heron Reef (23°27’S, 151°55’E) and Moreton Bay (27°29’S, 153°24’E) in Queensland, Australia, in 2014 and 201528; and Koror (7°20’N, 134°28’E), Palau, during November and December 2019. These are located within four distinct marine biogeographic provinces and three realms (Tropical Atlantic, Central Indo-Pacific, and Temperate Australasia)43. At each location fish were collected using barrier nets, dip nets, clove oil or hook and line, and immediately transferred to aquaria facilities at the Cape Eleuthera Institute, Heron Island and Moreton Bay Research Stations, and the Palau International Coral Reef Center. Fish were held in a range of tanks (60, 400, or 1400 L in the Bahamas, 10, 60, 100, 120, or 400 L in Heron Island and Moreton Bay, and 8, 80, 280, or 400 L in Palau) of suitable dimensions for different fish sizes ( 5). Each sample was titrated with 0.01–0.5 N HCl (with continuous aeration with CO2-free air) until the end point (grey-lavender; pH~4.80) was reached and stable for at least 10 min. If the sample was over-titrated (pink), 0.01–0.1 N NaOH was added to titrate back to the end point and the amount of base used was subtracted from the amount of acid. Acid and base were added using an electronic multi-dispenser pipette (Eppendorf Repeater ®E3X, Eppendorf, Hamburg, Germany) with a precision of  ± 1 ({{{{{rm{mu }}}}}})L. Additionally, the pH of several samples was monitored using a pH microelectrode (Mettler Toledo InLab Micro) to ascertain the correctness of the colorimetric end point. The amount of carbonate in the sample was then calculated using Eq. (1). The method was validated using certified reference material (Alkalinity Standard Solution, 25,000 mg/L as CaCO3, HACH) and the accuracy in the determination of solid samples was verified using certified CaCO3 powder (Suprapur, ≥ 99.95% purity, Merck) samples (60–500 ({{{{{rm{mu }}}}}})g) and resulted in 96.53 ± 1.94% accuracy (mean ± SE; n = 8).To compare values obtained with the two titration methods we further analysed 12 samples collected at Lizard Island, Australia, in February 2016. Samples were collected at 24 h intervals from one individual of Lethrinus atkinsoni (f. Lethrinidae, body mass: 245 g), a group of five Lutjanus fulvus (f. Lutjanidae, mean body mass: 21 g), and an individual of Cephalopholis cyanostigma (f. Serranidae, body mass: 295 g), following the procedures described above. During sample collection water temperature ranged from 29.1 °C during the night to 32.6 °C during the day, with an average of ~31 °C, mean salinity was 35.4, and pHNBS ranged from 8.13 to 8.21. To compare the amount of carbonate measured by the two methods we added carbonate samples to 20 ml ultrapure water and disaggregated crystals via sonication. We then used a Metrohm Titrando autotitrator and Metrohm Aquatrode pH electrode to measure initial pH of the suspension of carbonates, then titrated each sample of carbonate in two stages. Firstly, they were titrated down to pH 4.80 using 0.1 M HCl, adding 20 µl increments of acid until this was sufficient to keep pH below 4.80 for 10 min whilst bubbling with CO2-free air. This first stage was comparable to the single end point titration used for samples collected in Palau. Secondly, whilst continuing to bubble with CO2-free air, further acid was added to the sample until it reached pH 3.89 and was stable for 1 min. Then 0.1 M NaOH was added to the samples to return them to the initial pH. For all samples the first end point titration (to pH 4.80) yielded slightly higher values for carbonate content than the second double titration. The ratio between the two methods (single end point/double titration) was 1.08 ± 0.01 (mean ± SE; range: 1.04–1.14; Supplementary Table 2). As we found a small but consistent difference between the two methods, all following analyses were initially performed on the actual data obtained with the double titration for samples from Australia and The Bahamas, and the single end point titration for samples from Palau. Then, to assess the robustness of the results, we repeated the analyses after applying a correction factor of 1.08 to the excretion rates of Palauan fishes (that used the single end point titration method). All results were consistent and robust to the measured difference between the titration methods (Supplementary Figs. 8, 9).Finally, measurements of multiple samples from each individual collected over periods of 18–169 h (median: 64 h) were combined to produce an average individual excretion rate in ({{{{{rm{mu }}}}}})mol h−1. For fish held in groups, carbonate excretion rates per individual (of average biomass) were obtained by averaging the total excretion rate of the group across the sampling period and dividing it by the number of individuals in the tank. Excretion rates obtained from fish groups thus evened the intraspecific variability within tanks, and are therefore more robust than those directly obtained from fish held individually. This aspect was considered in our models by fitting weighted regressions (see the “Statistical modelling” section). In total, we measured the carbonate excretion rates of 382 individual fishes arranged in 192 groups (i.e., independent observations), representing 85 species from 35 families across three tropical regions (180 individuals from 29 species in Australia, 90 individuals from 10 species in the Bahamas, and 112 individuals from 46 species in Palau; Supplementary Table 1).We assume that during the sampling of carbonates fishes were close to their resting metabolic rate and that their carbonate excretion rates are representative of fish at rest. Although the ratio of tank volume to fish volume in our study (median ~660; inter-quartile range ~180–1700) typically greatly exceeds the guideline ideal range for measuring resting metabolic rate (20–50)85, fishes were fasted prior to and throughout sampling, and in most instances their movement was somewhat constrained by tank volume. Fasting reduces metabolic rate in all animals, including fish, as they do not undergo energy-intensive digestive processes and use energy reserves to support vital processes, triggering metabolic changes in many tissues and reducing activity levels86,87. Additionally, other than the carbonate syphoning ( More