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    Non-additive microbial community responses to environmental complexity

    Selection and initial metabolic profiling of organismsIn order to maximize the chance of obtaining communities with diverse taxonomic profiles from different environmental compositions, the organisms selected were drawn from a number of bacterial taxa known to employ varying metabolic strategies. In addition, given the growing relevance of synthetic microbial communities to industrial and biotechnological applications73,74,75,76, we chose to employ bacterial species that have previously been used as model organisms and have well-characterized metabolic capabilities. This criterion, paired with the availability of flux-balance models associated with a majority of these organisms, allows us to explore the metabolic mechanisms observed in our various experimental conditions with higher confidence. These selection principles resulted in a set of 15 candidate bacterial organisms (Acinetobacter baylyi, Bacillus licheniformis, Bacillus subtilis, Corynebacterium glutamicum, Escherichia coli, Lactococcus lactis, Methylobacterium extorquens, Pseudomonas aeruginosa, Pseudomonas fluorescens, Pseudomonas putida, Salmonella enterica, Streptomyces coelicolor, Shewanella oneidensis, Streptococcus thermophilus, and Vibrio natriegens) spanning three bacterial phyla (Actinobacteria, Firmicutes, and Proteobacteria, Supplementary Table 1, Supplementary Fig. 1a).A microtiter plate-based phenotypic assay was used to assess the metabolic capabilities of each of the 15 candidate organisms. Each organism, stored in glycerol at −80 °C, was initially grown in 3 mL of Miller’s LB broth (Sigma–Aldrich, St. Louis, MO) for 18 h with shaking at 300 rpm at each organism’s recommended culturing temperature (Supplementary Table 1). To maximize oxygenation of the cultures and prevent biofilm formation, culture tubes were angled at 45° during this initial growth phase. Candidate organism Streptococcus thermophilus was found to have produced too little biomass in this time period and was grown for an additional 8 h. Each culture was then separately washed three times by centrifuging at 6000 × g for 2 min, removing the supernatant, suspending the pellet in 1 mL of M9 minimal medium with no carbon source, and vortexing or triturating to homogenize. The cultures were then diluted to OD600 0.5 ± 0.1 as read by a microplate reader (BioTek Instruments, Winooski, VT) and distributed into each well of three PM1 Phenotype MicroArray Plates (Biolog Inc., Hayward, CA) per organism at final OD600 of 0.05 ± 0.01. The carbon sources in the PM1 plates (Supplementary Table 2, Supplementary Fig. 1b) were resuspended in 150 µl of M9 minimal media prepared from autoclaved M9 salts (BD, Franklin Lakes, NJ) and filter-sterilized MgSO4 and CaCl2 prior to inoculation. The cultures in each PM1 plate were incubated at each organism’s recommended culturing temperature with shaking at 300 rpm for 48 h. After this growing period, the OD600 of each culture was measured by a microplate reader to quantify growth. To account for evaporation in the outer wells of the plates, which could yield in inflated OD readings, three ‘evaporation control’ plates with no carbon source were inoculated with bacteria at a final OD600 of 0.05 and incubated at 30 °C for 48 h. The averaged OD600 readings of these plates were subtracted from the readings of the bacterial growth plates to correct for evaporation. A one-tailed t-test was performed using these corrected OD600 values to determine significance of growth above the value of the negative controls (p  More

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    Spatial and temporal pattern of wildfires in California from 2000 to 2019

    California has a vast area and spans ten latitudes, and its internal geographical conditions and climate conditions vary widely13. Therefore, the California wildfires in history differed greatly in their frequency, size, intensity and extent of damage8. As the California wildfires are growing fiercer, they have become a hot topic worldwide. However, there is still a long way to go before the general conclusions from the wildfire literature can be applied in practice. For example, how the analyses of which types of wildfires are increasing the fastest can be used to guide the amendment of wildfire management policies? and how to guide fire fighting methods based on the results of the wildfire dominant factor model? To provide some practical reference for wildfire management work, we grouped the wildfires according to size (large fires, small fires) and ignition cause (natural fires and human-caused fires), and discussed their distribution characteristics separately using the administrative units from CAL FIRE and the weather division of California from the National Oceanic and Atmospheric Administration (NOAA) as the base map. While focusing on wildfires in the past two decades, the distribution of wildfires from 1920 to 1999 was used as prior information for comparison.Wildfire size distributionThe burned area of wildfires is an important indicator of their destructive power. Several studies have shown that 1% of large and extreme wildfires are responsible for 90% of the total damage caused by wildfires14,15. Besides, the Probability density distribution of wildfire burned area, that is the wildfire size, has an obvious heavy tail feature. Research from Strauss et al.16 and Holmes et al.17 indicate that the wildfire size distribution fits the Pareto distribution well. Based on their conclusions, five common heavy-tailed distributions were selected (which are Gamma, Lognormal, Pareto, Truncated Pareto and Weibull distribution) to fit the wildfire size distribution throughout California within the eighty years before year 2000 and twenty years after year 2000s, seeking the best description of the California wildfire size distribution. The estimated parameters and the goodness of fit test results are shown in Tables 1 and 2. The empirical wildfire size distribution and the fitting curve are shown in Figure. 1. Fig. 1 shows that the wildfire size distribution did not change much from the last century to the present. Also, all these fitting curves can capture the main feature of the empirical distribution. Table 1 lists the estimated shape and scale parameters for each distribution. It can be found that the shape parameter of current wildfire size distribution ((alpha)) decrease compared to the historical wildfires. The value of shape determines the thickness of the tail. A smaller shape value means a thicker tail. In the context of wildfires, it means the probability density of large wildfires increase. Table 2 shows the goodness of fit for each distribution by Akaike Information Criterion (AIC), Kolmogorov-Smirnov (K-S) and Cramer-VonMises (CvM) test score. For all the tests, the smaller the value of the test score, the better the fit. Among these five fits, the lognormal distribution is the best for wildfire size description in 1920–1999, following by the Pareto distribution; while the best fitting distribution in 2000–2019 changes to the truncated Pareto, the second-best fitting result is still from the Pareto distribution. Therefore, Pareto is appropriate to summarize the general feature of wildfire size distribution in California.
    Table 1 Heavy-tailed distribution fitting results of wildfire size distribution.Full size tableTable 2 Goodness-of-fit test results of Akaike Information Criterion (AIC), Kolmogorov–Smirnov (K–S) test, and Cramer-Von Mises (CvM) test for heavy-tailed distribution fitting.Full size tableTo further explore the variation of wildfire size distribution within the entire state of California, the probability density of the logarithm of wildfire size was plotted for 1920 to 1999 and 2000 to 2019. As shown in Fig. 2, wildfires in 1920–1999 were mostly about 100–1000 acre (0.40–4.05 km(^2)) in size; while during 2000–2019, the number of small fires increased significantly,Figure 1The empirical histogram of wildfire size and the typical heavy tailed distribution fitting curves for wildfires in (a) 1920–1999 and (b) 2000–2019. The wildfire sizes are in acres (1000 acre = 4.05 km(^2)). The curve with different colors represent different types of distribution, the black, yellow, red, green, and blue curves represent the fitting result of Gamma, Log-normal, Pareto, Truncated Pareto, and Weibull distribution, separately. The tail of the distribution was truncated from the burned area of 2000 acres to show the fitting difference between different distributions.Full size image the majority of wildfire sizes were in the range of 10–100 acres (0.04–0.40 km(^2)). Wildfires were also divided into natural wildfires and human-caused wildfires based on their ignition causes. The red, green and blue dashed lines in the figure delineate the fitting results of Gamma, Lognormal and Weibull distribution separately, which capture the distribution characteristics for each type of the wildfires. The fitting parameters and the goodness of test results were attached in the supplementary information (Table S1). Figure 2b,e show that although the overall shape of the distribution of natural wildfires in 1920–1999 and 2000–2019 are similar, the proportion of extreme wildfires larger than 10,000 acres (40.47 km(^2)) has increased significantly in the last two decades. From Fig. 2c,f, it can be found that the shape of the fire size distribution of human-caused wildfires differs greatly, which is the result of the rapid increase of the proportion of small fires. Although human activity directly or indirectly ignited 44(%) of wildfires in the United States18 and 39(%) of wildfires in California (as shown in the statistical summary in Table 3), they are generally easily contained in the initial attack19. The rapidly growing population in California has led to increased human activities and community coverage, which has increased the incidence of human-caused wildfires20. However, the expansion of human land has reduced the continuity, which is essential for the spread of wildfires21. Also, the improvement of wildfire monitoring and fire fighting ability has made most of the small human-caused wildfires able to be extinguished during the first 24 h after discovery19. Together, these reasons lead to the rapid increase in the frequency of small human-caused fires in the past two decades.Figure 2Logarithm of California wildfire size empirical distribution in 1920–1999 and 2000–2019. The Gamma, Lognormal and Weibull distribution fitting results are indicated by the red, green and blue dash lines. The wildfire sizes are in acres (1000 acre = 4.05 km(^2)). (a–c) are the historical wildfires from 1920 to 1999, (d–f) are the wildfires from 2000 to 2019; (a,d) are the distribution of all wildfires, (b,e) are the distribution of natural wildfires, (c,f) are the distribution of human-caused wildfires.Full size imageTable 3 Statistical summary of wildfire ignition causes in CA from 2000 to 2019.Full size tableLarge and small fires are not only very different in the probability density distribution characteristics but also in prevention measures, response methods, and resources needed to be invested in fire fighting22,23. In order to discuss the spatiotemporal distribution of large and small wildfires, it is critical to determine the threshold of large wildfires. Therefore, the mean excess plot shown in Fig. 3 was used to determine the threshold of the large fire. The linear part’s starting point is the threshold of the extreme value in the original distribution17,24. As shown in Fig. 3, 500 acres (2.02 km(^2)) would be appropriate to separate the large fires and small fires for the entire California. Also, as shown in Fig. 1, 500 acres is an appropriate starting point of the heavy tail. Based on the historical record from CAL FIRE, the frequency of large wildfires accounted for 19.68 (%) of the total (1247 out of 6336 wildfires), while the burned area of large wildfires accounted for 97.04 (%) of the total burned area (13,089.68 out of 13,488.19 thousand acres, that is 52,972.05 out of 54,584.77 km(^2)) in the past two decades. According to the size class of fire defined by national wildfire coordinating group (NWCG), the large fire in this study refers to the wildfires of or larger than class E.Figure 3Mean excess plot for wildfires burned areas.Full size imageTemporal variation of wildfires in CA from 1920–1999 and 2000 to 2019Based on the wildfire history records provided by the CAL FIRE Fire Perimeter database, the frequency and burned area of wildfires in CA from 1920 to 2019 were extracted, and separated into two time periods: 1920–1999 and 2000–2019. California has seen an average of 317 wildfires a year over the past 20 years, which were included in the Fire Perimeter database, burning an average of 674,410 acres (2,729.24 km(^2)). Figure 4 shows the changes in the annual wildfire frequency (a–e) and burned area (f–j) over time. The red lines represent the segmented linear regression trend in 1920–1999 and 2000–2019, separately. The grey areas depicted the 95(%) confidence interval. Comparing the slope of the fitting line, it is apparent that in most cases, the frequency and burned area growth of wildfires in the past two decades are much higher than that during the 80 years in history, if the breakpoint is fixed to the year 2000. Also, the 95(%) confidence intervals of the regression lines over the past two decades are generally larger than that between 1920 and 1999. Although the sample size in these two time periods is different, it can be seen from the spread of data points that the uncertainty of wildfire frequency and burned area have increased significantly in the past two decades. From the view of fire frequency, the rapid increase in the number of small fires brings greater uncertainty than that of large fires, and the uncertainty of natural fires is higher than that of human-caused fires. In terms of the burned area, the uncertainty comes mainly from large wildfires and natural wildfires. When it comes to the increase rate, Fig. 4b,c,g,h show that in the large and small wildfire group, the accelerated increase of wildfire frequency was mainly contributed by the small fires, while the accelerated increase of burned area was from the large fires. The frequency of large wildfires and the burned area of small wildfires in the recent 20 years even have the trend of decrease. This trend suggests that it would be efficient for the fire management department to pay more attention to the regions with the potential risk of extreme fires and prevent small fires from burning continuously and becoming large fires. Figure 4d,e,i,j display the trend for the natural and human-caused wildfires. The increase of the human-caused wildfire frequency is much faster than that of the natural wildfires in both time periods. However, the increases in the burned area due to the increasing frequency of wildfires with different causes are similar. It shows that the human-caused small wildfires have the strongest growth trend in the recent twenty years. In the view of wildfire management, while human activities increase the likelihood of wildfires ignition, large natural fires are more threatening in terms of size and destruction.Figure 4Temporal distribution of wildfire frequency and burned area from 1920 to 2019. The red line indicates the segmented linear regression results for 1920–1999 and 2000–2019. The gray areas indicate the 95(%) confidence interval. (R^2) represents the coefficient of determination and p represents the p-value. (a–e) are the temporal distribution of wildfire frequency, (f–j) are the temporal distribution of the burned area of wildfires; (a,f) are the distribution for all wildfires; (b,g) are plots of large fires, which have the burned area larger than 500 acres (2.02 km(^2)), while (c,h) are plots of small fires, which have the burned area in the range of 10 acres (0.04 km(^2)) to 500 acres (2.02 km(^2)); (d,i,e,j) divided wildfires into natural fires and human-caused fires. The small plot in (h) zooms in to the burned area of 0–50 thousand acres.Full size imageCalifornia’s Mediterranean climate is characterized by hot and dry summers, which leads to a high wildfire ignition risk25,26. Also, the hot and dry Santa Ana wind events have accelerated the spread of wildfires each fall27. The precipitation in California was concentrated in the winter, and the temperature was moderate28, allowing wildland vegetation to grow fast and storing fuel for next year. However, the significant climate change after the year 2000 has affected the seasonal distribution of wildfires.Figure 5 compiles box plots of the seasonal variation of wildfire frequency and burned area distribution in 1920–1999 and 2000–2019, which were divided into different groups by size and ignition cause as well. The boxes and points in the plots represent the wildfire frequency or total burned area in this month each year. In general, the peak season for wildfires was late summer and early autumn. In terms of the frequency, from 1920 to 1999, the wildfire season started in June, and the most frequent occurrence was observed in August. In most years, the number of wildfires in July and August were similar, followed by June and September. However, from 2000 to 2019, the frequency of wildfires in July increased significantly and became much more considerable than in other months. Meanwhile, the start of the wildfire season has also advanced to May, and the duration has extended. From May to September, the overall fire frequency of all wildfires, large wildfires, and small wildfires increased each month. The number of natural fires also increased between June to September. The frequency of human-caused wildfires, on the other hand, increased each month. Similar to the previous discussions, the increase of wildfire frequency in July in the past two decades mainly came from small fires and human-caused wildfires. It is worth noting that there has been a major increase in the natural wildfires in July in the past two decades. In terms of the burned area, the month with the largest total burned area of wildfires in 2000–2019 has been advanced to July, compared to August in 1920–1999. Natural wildfires and human-caused wildfires contributed similarly to the burned area growth. There is no noticeable change in the total burned area in months other than the wildfire season.Figure 5Seasonal variation of wildfire frequency and burned area from 1920 to 2019. The threshold of large and small wildfires is 500 acre (2.02 km(^2)). (a–j show the seasonal variation of fire frequency, (k–t) show the seasonal variation of burned area; (a,b,k,l) are plots for all CA wildfires, (c–f) and (m–p) divided fires into large and small fire size group, (g–j) and (q–t) divided fires into natural and human-caused wildfire groups. The small plots in (o) and (p) zoom in to the burned area of 0–10 thousand acres.Full size imageSpatial distribution of wildfires in CA from 2000 to 2019CAL FIRE has 21 operational units throughout the state that are designated to address fire suppression over a certain geographic area and six ‘Contract Counties’ (Kern, Los Angeles, Marin, Orange, Santa Barbara and Ventura) for fire protection services. Due to the complex environmental and terrain conditions in California, the risk of wildfires varies significantly from region to region, and the causes of extreme wildfires are also completely different. In order to provide fire managers with more effective fire suppression measures, this study used kernel density estimation (KDE) to analyze hot spot regions of all the wildfires, natural fires and human-caused fires from 2000 to 2019, the KDE for wildfires in 1920–1999 were also added for comparison. The resolution of KDE analyses was 500 m. The results are shown in Figs. 6 and 7. Figure 6 treated all the fires equally, and shows the spatial density of wildfire numbers; while Fig. 7 weighted the wildfires with their burned area, and represents the burned area-weighted spatial density of wildfire occurrence.Comparing the spatial density distribution of all wildfires in different time periods in this study, as shown in Fig. 6a,d, it is evident that the coverage of wildfire occurrence has increased significantly. From 1920 to 1999, the only hot spot with a very high wildfire density was Los Angeles County (LAC). In the past two decades, not only did the hot spot of LAC expand to Ventura county (VNC) but also the wildfire density in the southwest corner of Riverside Unit (RRU) and San Diego Unit (MVU) on the south coast and the southwest corner of San Bernardino Unit (BDU) have grown to a very high level. In the eastern part of the San Joaquin Drainage under the central California climate division, namely the Sierra Nevada Mountains (identified in Fig. 10), wildfire density has increased from very low to very high. Among them, Nevada-Yuba-Placer Unit (NEU) and Tuolumne-Calaveras Unit (TCU) are the newly emerged high-density wildfire regions. Moreover, the spatial density distributions were grouped by causes, and Fig. 6b,e represent the natural wildfires, and c,f represent the human-caused wildfires. It can be found that while the high-density areas of natural wildfires have not shifted in both time periods, the density has increased. In contrast, the density of human-caused wildfires has increased notably in western and central California in the past two decades. Before the year 2000, there were almost no human-caused wildfires along the west coastline, but almost every county along the west-coast is characterized by an increase of human-caused wildfires in the past two decades. San Benito-Monterey Unit (BEU) and San Luis Obispo Unit (SLU) even became the new hot spots. Meanwhile, the coverage area of the original human-caused wildfire hot spots on the south coast has been further expanded. From 1920 to 1999, the density of human-caused wildfires in the Sierra Nevada Mountain was very low in central California. Still, in the past two decades, it has become a new wildfire ignition hot spot. The counties in northern California, such as Siskiyou Unit (SKU), Shasta-Trinity Unit (SHU), Tehama-Glenn Unit (TGU), etc., have been almost no human-caused wildfires from 1920 to 1999, but widespread human-caused wildfires have emerged in the past two decades.After inducing the wildfire burned area into the KDE calculation, the spatial density distribution has changed significantly. In general, as shown in 7a,d, the regions where large wildfires are concentrated are SKU and Sonoma-Lake-Napa Unit (LNU) in Northern California and MVU in the South Coast. Although the number of wildfires in the central Sierra Nevada Mountains has increased significantly, the total burned area did not significantly change. Thereafter, the wildfires with different causes were separated, and it can be found from 7b,e that natural wildfires with large burned areas were concentrated in northern California. In the past two decades, the region with a very high-density of wildfire occurrence in the northernmost SKU has expanded significantly, and a new hot spot of wildfires has also appeared in Lassen-Modoc Unit (LMU). However, the high-density wildfire area between Tuolumne-Calaveras Unit (TCU) and Madera-Mariposa-Merced Unit (MMU) did not arise in the past two decades. In the distribution of human-caused wildfires, as shown in 7c,f, the density of wildfires in MVU in the southernmost part of California has surpassed that of historical hot spots, VNC and LAC. Meanwhile, the density of wildfires at the junction of TCU and MMU in the central region has also increased.Comparing 6 and 7, it is obvious that the spatial distribution of wildfire density and burned area-weighted wildfire density are not entirely consistent. CAL FIRE Units along the South Coast, which are in the climate division of South Coast Drainage, are prominent in both densities, and are mainly composed of human-caused wildfires. The SKU and LMU units in the northernmost part of North Coast Drainage are the areas where natural wildfires were concentrated, and the distribution of SKU wildfires is relatively wider. The Units adjacent to the Sierra Nevada Mountains in central California, which are the units in the northeast of San Joaquin Drainage, show a low wildfire density when the burned area was added to the calculation, even though the number of wildfires has increased rapidly in the past two decades. This distribution is related to the vegetation cover and land use in California. In northern California, the evergreen and deciduous forests are the dominant vegetation, the forests are dense and less developed by human, and the population density is relatively low28,29. Wildfires are difficult to be detected early-on in these remote areas, and there is enough fuel to keep them burning and spreading. On the other hand, shrubs are the dominant vegetation in southern California. Also, most of the southern CA areas have been developed and associated with a higher level of human activity, leading to wildfires in southern California has a greater social and economic impact on human lives and society30.Figure 6Kernel density distribution of wildfire occurrence in CA during 1920–1999 (a–c), and 2000–2019 (d–f). (a–f) are wildfire density distribution maps for all wildfires, natural wildfires and human-caused wildfires in CA, separately.Full size imageFigure 7Kernel density distribution of burned area weighted wildfire occurrence in CA during 1920–1999 (a–c), and 2000–2019 (d–f). (a–f) are wildfire density distribution maps for all wildfires, natural wildfires and human-caused wildfires in CA, separately.Full size imageFrom the discussion above, it can be found that while the frequency and spatial density distribution of human-caused wildfires have changed significantly in the past two decades, the changes in burned area were relatively small because of the high proportion of small wildfires. Also, unlike natural fires, human-caused fires can be prevented or controlled in the early stage by taking effective measures19. Therefore, the human-caused wildfires were further classified to generate a more detailed spatial density distribution map. The anthropogenic causes were subdivided by CAL FIRE into 15 types. The spatial distribution of wildfires with different causes are shown in the supplementary figures (Supplementary Fig. 1). In this study, human-caused wildfires were classified into three categories: transportation (railroad, vehicle, aircraft), human activity (equipment use, smoking, campfire, debris, arson, playing with fire, firefighter training, non-firefighter training, escaped prescribed fire, illegal alien campfire) and construction (powerline, structure). As shown in Fig. 8, hot spots for all three broad types of wildfires include areas along the Sierra Nevada Range and along the southern coast. However they differ in the density level and coverage. Among them, the number and coverage of wildfires caused by human subjective behavior are larger than those caused by traffic and construction. Besides, the wildfires caused by human activities also led to the emergence of a unique hot spot in the northernmost edge of CA, which is the SKU county. Therefore, for the wildfire management purpose, it would be proactive to provide wildfire education to residents in regions with high wildfire risk, update the wildfire risk map in time, and issue early warnings of wildfire risk to the public during the fire season, to increase the public’s awareness of wildfire prevention.Figure 8KDE Analysis of human-caused wildfires in CA from 2000 to 2019. (a) Transportation (railroad, vehicle, aircraft); (b) Human Activity (equipment use, smoking, campfire, debris, arson, playing with fire, firefighter training, non-firefighter training, escaped prescribed fire, illegal alien campfire); (c) Human Construction (power line, structure).Full size imageMultivariate analysis of California wildfiresThe occurrence and spread of wildfires are related to human activities and environmental variables. In order to formulate effective suppression and control policies for wildfire management, it is essential to understand the relationship between the spatial distribution of wildfires and various variables. From the KDE analysis, the spatial distributions of the wildfire density calculated with and without burned area were obtained, which also shows the areas with high wildfire risk from 2000 to 2019. According to the research from Faivre et al.7, 12 variables that have potential correlations with wildfires, involving human-related variables, geographic conditions, fuel, and climate variables were selected to conduct the subsequent analyses.Table 4 calculated the spatial correlation between the burned area-weighted wildfire density and potential anthropogenic and environmental variables within the wildfire perimeters, as well as the interrelation between each variable. It can be derived from the first column that among the human-related variables, except for the distance to the road, other variables are positively correlated with the wildfire occurrence density. It means that in areas where wildfires have occurred in the last two decades, the farther away from the power line, the higher the wildfire density; the closer to the road, the higher the wildfire density; and the greater the density of houses and population, the higher the density of wildfires. Among environmental variables such as topography, vegetation cover, and climate, only elevation is negatively correlated with wildfire density. That is, the higher the elevation, the lower the wildfire density. From the correlations among various variables, it can be found that there is a strong correlation between the distance from the wildfire perimeter to the road and power line, population, and house density, as well as elevation and two climate variables. For further analyses, one variable would be removed between the two variables whose correlation is greater than 0.5. Therefore, the distance to power line, population density and elevation were removed in the multivariate analysis.Table 4 Spatial Correlation Analysis between 12 selected variables wildfire occurrence density: distance to power line (DP), distance to road (DR), housing density (DH), population density (DP), elevation, aspect, slope, tree, shrub, grass, maximum temperature (Tmax), maximum vapor pressure deficit (VPDmax).Full size tableThe principal component analysis (PCA) was implemented on the remaining variables and the two types of wildfire spatial densities obtained from KDE, to classify the variables and evaluate their relationships. The eigenvalue matrix was attached in the supplement information (Supplementary Table S3.). Both PCA results require five principal components to explain at least 80(%) of the data variance. The interrelations of the variables and the fire occurrence density decomposed by PC1 and PC2 are shown in Fig. 9. There is a strong and similar interrelationship between the two types of fire densities and the driver variables. The length and orientation of the variables indicate that the wildfire densities have the strongest correlation with the grass cover and the other two variables of vegetation cover (shrub and tree), namely fuel cover in general. Meanwhile, the correlation between the climate variables and the wildfire densities is also significant, especially for the maximum vapor pressure deficit (VPDmax). Besides, the human-related variables are moderately correlated with the wildfire densities, while topographic variables are almost orthogonal with the wildfire densities, which means their correlations are weak.Figure 9PCA loading plots with (a) fire occurrence density, (b) burned area weighted fire occurrence density. The variables include distance to road (DR), housing density (DH), aspect, slope, tree, shrub, grass, maximum temperature (Tmax), maximum vapor pressure deficit (VPDmax), wildfire density (FOD) and burned area weighted wildfire density ((FOD_A)).Full size imageBased on the analyses above, the Logistic Regression (LR) was implemented on the selected nine variables to further determine their relationship with wildfire occurrence. The coefficient, standard error and the significance level for each variable were shown in Table 5. The positive and negative sign of the coefficient represents the positive or negative correlation with the wildfire occurrence, and the p-value indicates whether the correlation is significant. The results reveal that the climate variables are the most critical in whether the wildfires can be ignited or not, followed by the variables of distance to road, and the cover of grass. The sign of the coefficient of the human-related variables is negative, which means that in general, wildfires ignited far from the human communities. Similarly, the areas where trees are dominant vegetation cover have fewer wildfire ignitions. Overall, logistic regression results show that the areas with high temperature, high VPD, grass as the dominant vegetation cover, and away from human communities have a higher risk of wildfire ignition.Table 5 Logistic regression results of uncorrelated explanatory variables for California wildfires occurrence (2000–2019).Full size table More

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    An integrative approach reveals a new species of flightless leaf beetle (Chrysomelidae: Suinzona) from South Korea

    Description of Suinzona borowieci sp. nov. (Figs. 1, 2 and 3)Figure 1Morphology of Suinzona borowieci sp. nov. and related species: (a,b) Holotype of S. borowieci sp. nov. (a) Dorsal habitus, (b) lateral habitus; (c–e) exposed hind wing, (c) S. borowieci sp. nov., (d) S. cyrtonoides, (e) Potaninia assamensis; (f–g) aedeagus with everted internal sac (left) and flagellum (right); (f) S. borowieci sp. nov., (g) S. cyrtonoides.Full size imageFigure 2Genitalia of Suinzona borowieci sp. nov. and related species: (a–d) S. borowieci sp. nov. (a) Aedeagus, dorsal view; (b) aedeagus, lateral view; (c) aedeagus, apical view; (d) spermatheca. (e) Aedeagus of Suinzona cyrtonoides, apical view.Full size imageFigure 3Distribution map of Suinzona and sampling sites: (a) Distribution of Suinzona species in China, South Korea and Japan, (b) type locality and collection sites of Suinzona borowieci sp. nov. in South Korea. Records of distribution are taken from Ge et al.3, Suzuki et al.21 and the results of this work. The map is redrawn and modified from National Geographic Information Institute of Korea (https://www.ngii.go.kr).Full size imageFamily Chrysomelidae Latreille, 1802Subfamily Chrysomelinae Latreille, 1802Genus Suinzona Chen, 1931Type localitySouth Korea: Gyeongbuk Province, Yeongyang County, Irwolsan Mountain, 36° 48′ 30.42″ N, 129° 5′ 23.56″ E, ca. 1135 m.Type materialHolotype: male (NMPC), South Korea: Gyeongbuk Prov., Yeongyang, Mt. Irwolsan, 36° 48′ 30.42″ N, 129° 5′ 23.56″ E, ca. 1135 m, 12.VI.2011, H.W. Cho // HOLOTYPUS Suinzona borowieci sp. n. Cho & Kim 2020. Paratype: SOUTH KOREA – Gyeongbuk Prov.: 1 female (NMPC), same data as holotype plus PARATYPUS Suinzona borowieci sp. n. Cho & Kim 2020; 1 female (HCC), same data as holotype except 31.VII.2004; 1 female (HCC), same data as holotype except 31.VII.2004; 4 males 2 females (HCC), same data as holotype except 22.V.2009; 8 males 2 females (HCC), same data as holotype except 25.VI.2010; 4 males 2 females (HCC), same data as holotype except 10.VI.2017; 1 male 1 female (HCC), same data as holotype except 17.VI.2017; 1 male (HCC), same data as holotype except 36° 48′ 11.74″ N, 129° 6′ 10.01″ E, ca. 1190 m, 17.V.2020; 3 males 1 female (HCC), same data as holotype except 7.VI.2020; 2 males (KNAE), Yeongyang, Irwol-myeon, Mt. Irwolsan, 7.VI.2014, J.K. Park // I14_KNAE483613 // I14_KNAE483649; 1 male 1 female (HCC), Bongwha, Myeongho-myeon, Bukgok-ri, Mt. Cheongnyangsan, 36° 47′ 47″ N, 128° 54′ 30″ E, 21–22.V.2015, J.S. Lee; 1 female (HCC), Daegu, Dong-gu, Mt. Palgongsan, 21.V.1998; 2 males 1 female (HCC), Gunwi, Bugye-myeon, Dongsan-ri, Mt. Palgongsan, 9.V.2009, S.S. Jung; 1 male 1 female (HCC), Yecheon, Bomun-myeon, Urae-ri, Mt. Hakgasan, 26.V.2010, Y.J. You; 1 male (HCC), Yecheon, Bomun-myeon, Mt. Hakgasan, 36° 40′ 32.16″ N, 128° 35′ 38.24″ E, ca. 330 m, 3.VI.2020, H.W. Cho; 1 female (HCC), Cheongsong, Hyeonseo-myeon, Galcheon-ri, 26.V.2004, H.W. Cho; Gangwon Prov.: 2 females (HCC), Taebaek, Hwangji-dong, Mt. Hambaeksan, 37° 9′ 53.22″ N, 128° 55′ 1.35″ E, ca. 1470 m, 6.VI.2005, H.W. Cho; 2 males 3 females (HCC), same data as preceding one except 6.VI.2006; 1 female (HCC), same data as preceding one except 29.V.2009; 1 female (HCC), same data as preceding one except 10.VI.2017; 1 female (HCC), same data as preceding one except 5.VI.2020; Chungnam Prov.: 1 male (HCC), Buyeo, Gyuam-myeon, Sumok-ri, 1–15.VI.2005, J.W. Lee.Other materialSix mature larvae (HCC), same data as holotype except 29.VI.2017; 5 mature larvae (HCC), Gangwon Prov., Taebaek, Hwangji-dong, Mt. Hambaeksan, 19.VI.2006, H.W. Cho; 8 mature larvae (HCC), Gyeongbuk Prov., Yecheon, Bomun-myeon, Mt. Hakgasan, 31.V.2020, H.W. Cho; 7 mature larvae (HCC), same data as preceding one except 3.VI.2020.DiagnosisSuinzona borowieci sp. nov. is almost identical to S. cyrtonoides in the shape of the flagellum of the aedeagus. However, it can be distinguished by its larger body size (5.5–7.0 mm vs. 4.8–6.0 mm), denser punctures on elytra (less dense punctures in S. cyrtonoides), larger and broader aedeagus with the distal tips of the flagellum quadrifurcated and slightly curved, arising from two sclerotized tubes (with a smaller and narrower aedeagus with distal tips of the flagellum quadrifurcated and almost straight, arising from a sclerotized tube in S. cyrtonoides).DescriptionMeasurements in mm (n = 5): length of body: 5.50–7.00 (mean 6.18); width of body: 3.50–4.50 (mean 3.97); height of body: 2.60–3.40 (mean 2.94); width of head: 1.65–1.95 (mean 1.81); interocular distance: 1.15–1.50 (mean 1.33); width of apex of pronotum: 1.90–2.20 (mean 2.02); width of base of pronotum: 2.70–3.25 (mean 2.94); length of pronotum along midline: 1.75–2.05 (mean 1.90); length of elytra along suture: 3.75–5.20 (mean 4.41). Body: oval and strongly convex (Fig. 1a,b). Body dark bluish-black with weak metallic lustre, rarely with a dark brass dorsum. Antenna, mouthparts and tarsus partially dark reddish-brown. Head. Vertex weakly convex, covered with sparse punctures, becoming coarser and denser towards sides, with convex area above antennal insertion. Eyes strongly transverse-oblong and protuberant. Frontal suture V-shaped, forming obtuse angle, arms bent at middle, reaching anterior margin. Frons flat, strongly depressed at anterior margin, covered with dense punctures. Clypeus narrow and trapezoidal. Anterior margin of labrum weakly concave. Mandibles with 2 blunt apical teeth and dense punctures bearing setae on outer side. Maxillary palp 4-segmented with apical palpomere fusiform, truncate apically. Antennae in males much longer than half the length of the body; antennomere 1 robust; antennomere 2 shorter than 3; antennomere 3 longer than 4; antennomeres 7–10 each moderately widened, much longer than wide; antennomere 11 longest, approximately 2.4 times as long as wide. Antennae in females less than half the length of the body. Pronotum. 1.50–1.63 times as wide as long. Lateral sides widest at or near base, roundly narrowed anteriorly, anterior angles strongly produced. Anterior and lateral margins bordered, lateral margins barely visible in dorsal view. Trichobothria present on posterior angles. Disc glabrous, covered with moderately dense punctures, becoming coarser along basal margin; interspaces covered with fine and moderately dense punctures. Scutellum much wider than long, widely rounded apically, with a few fine punctures. Elytra. 1.07–1.16 times as long as wide. Lateral sides widest near middle, roundly narrowed posteriorly. Humeral calli not developed. Disc glabrous and finely rugose, covered with rather irregular punctures arranged in longitudinal rows near suture and lateral margin, more irregular in median region; interspaces covered with fine and sparse punctures. Epipleura wholly visible in lateral view. Hind wings steno- and brachypterous (Fig. 1c). Venter. Hypomera weakly rugose, with a few punctures near anterolateral corners of prosternum. Prosternum covered with coarse and dense punctures bearing long setae; prosternal process broad and strongly expanded apicolaterally, closing procoxal cavities posteriorly. Metasternum covered with punctures bearing long setae, dense medially, sparse laterally. Abdominal ventrites covered with moderately dense punctures bearing long or short setae; apex of last visible abdominal ventrite deeply emarginate in males while rounded in females. Legs. Moderately robust. Tibiae simple without preapical tooth. Tarsomere 1 subequal in width to tarsomere 3 in males but distinctly narrower than tarsomere 3 in females. Tarsal claws simple. Genitalia. Aedeagus broad, lateral margins shallowly concave, with apex moderately produced and truncate in dorsal view (Fig. 2a,c); regularly curved, tapering from middle to apex, with apex pointed and slightly bent upward in lateral view (Fig. 2b); flagellum club-shaped with sharp, sclerotized and quadrifid tips (Fig. 1f). Spermatheca U-shaped, long and rounded at apex (Fig. 2d).EtymologyDedicated to the first author’s mentor Prof. dr hab. Lech Borowiec (University of Wrocław, Poland), the world’s leading specialist in tortoise beetles.DistributionSouth Korea: Chungnam, Gangwon, Gyeongbuk, Daegu (Fig. 3a,b).RemarksThe shape of the apical part of the male genitalia exhibits a certain degree of variation even within the same population. It is difficult to recognize a significant difference in the shape of the male genitalia between populations, but individuals from Yeongyang have a relatively large aedeagus. All specimens that we examined had a dark bluish-black dorsum with a weak metallic lustre, but a single specimen with a dark brass dorsum was found in Yecheon.Mature larva and biology of Suinzona borowieci sp. nov. (Figs. 4, 5 and 6)DiagnosisThe fourth (last) instar larva of S. borowieci sp. nov. is very similar to that of S. cyrtonoides comb. nov. in body shape, colouration and tubercular pattern. However, this species can be distinguished by the 4–5 small secondary tubercles between Dae and DLai on the meso- and metathorax and more densely setose bodies (1 large tubercle between Dae and DLai on the meso- and metathorax and less densely setose body in S. cyrtonoides).Figure 4Mature larva of Suinzona borowieci sp. nov.: (a) Dorsal habitus, (b) lateral habitus, (c) ventral habitus.Full size imageFigure 5Larval morphology of Suinzona borowieci sp. nov.: (a) Head, (b) maxillae and labium, (c) tibiotarsus and pretarsus, (d) mandible, (e) labrum and epipharynx, (f) Schematic presentation of tubercular patterns (top: prothorax; middle: mesothorax; bottom: 2nd abdominal segment).Full size imageFigure 6Host plants of Suinzona borowieci sp. nov.: (a) Arabis pendula L. from Yeongyang, (b) Urtica angustifolia Fisch. ex Hornem. from Yeongyang, (c) Aconitum pseudolaeve Nakai from Taebaek, (d) Isodon inflexus (Thunb.) Kudo from Yecheon; (e–f) A. pseudolaeve Nakai and U. angustifolia Fisch. ex Hornem. for laboratory tests (e) Adult from Yeongyang feeding on leaves, (f) larvae from Yecheon feeding on leaves.Full size imageDescriptionBody length 8.1–8.8 mm, width 2.9–3.2 mm, head width 1.75–1.80 mm (n = 3). Body elongate, rather broad, widest at abdominal segments III–IV, thence moderately narrowed posteriorly and slightly convex dorsally (Fig. 4a). Head pale yellowish-brown, densely setose, with a blackish-brown V-shaped mark along frontal arms; lateral regions of epicrania largely blackish-brown; posterior half of clypeus brown to dark brown; apex of labrum and mandibles blackish-brown. General colouration of integument yellowish-white, but dorsal integument densely covered with minute brown spinules (Fig. 4b); dorsal tubercles dark brown and ventral ones unpigmented (Fig. 4c), both densely setose; spiracles blackish-brown. Legs pale yellow with apex of tibiotarsus and pretarsus brown. Eversible glands absent. Pseudopods present on abdominal segments VI–VII. Head. Hypognathous, rounded, strongly sclerotized (Fig. 5a). Epicranium with 72–77 pairs of setae of varying length; epicranial stem distinct; frontal arms V-shaped, slightly sinuate, not extending to antennal insertions; median endocarina distinct, extending to frontoclypeal suture. Frons slightly depressed medially with 25–29 pairs of setae of varying length. Clypeus almost straight at anterior margin with 3 pairs of setae. Labrum deeply concave anteriorly with 2 pairs of setae and 2 pairs of campaniform sensilla (Fig. 5e, left); epipharynx with 6–7 pairs of setae at anterior margin (Fig. 5e, right). Mandible robust, palmate and 5-toothed, with 4–5 setae and 3 campaniform sensilla; penicillus present (Fig. 5d). Maxillary palp 3-segmented; palpomere I rectangular with 2 setae and 2 campaniform sensilla; II swollen cylindrical with 3 setae and 1 campaniform sensillum; III subconical with 1 seta, 1 digitiform sensillum and 1 campaniform sensillum on sides and a group of peg-like sensilla at the apex; palpifer well developed with 2 setae (Fig. 5b). Mala rounded with 13–14 setae and 1 campaniform sensillum; stipes distinctly longer than wide with 12–14 setae; cardo with 2–3 setae. Labial palp 2-segmented; palpomere I rectangular with 1 campaniform sensillum; II subconical with 1 seta, 1 campaniform sensillum and a group of peg-like sensilla at the apex. Hypopharynx bilobed, densely covered with minute spinules; prementum with four pairs of setae and three pairs of campaniform sensilla; postmentum basolaterally covered with minute spinules, with 8–9 pairs of setae. Six stemmata present on each side, 4 of them located above the antenna and 2 behind the antenna. Antenna 3-segmented; antenomere I wider than long with 2 campaniform sensilla; II approximately as wide as long, with a conical sensorium and 3–4 min setae; III subconical with 5–6 min setae. Thorax. Prothorax with D-DL-EP (dorsal, dorsolateral and epipleural tubercles fused together, 164–179) largest; P (pleural tubercle, 9–11) and ES-SS (eusternal and sternellar tubercles fused, 6–7) unpigmented (Fig. 5f). Meso- and metathorax with dorsal tubercles more or less arranged in 3 transverse rows; Dai (dorsal anterior interior, 6–10) on both sides separated, smaller than Dae (dorsal anterior exterior, 11–15); DLai (dorsolateral anterior interior, 4–5); Dpi (dorsal posterior interior, 12–15); Dpe (dorsal posterior exterior, 10–13) smaller than Dpi; DLpi (dorsolateral posterior interior, 17–19); DLe (dorsolateral exterior, 40–47) large; dorsal region with 8–9 secondary tubercles, 3 of them located anterior to Dai and Dae, 4–5 between Dae and DLai and 1 anterior to DLe; EPa (epipleural anterior, 17–22) larger than EPp (epipleural posterior, 8–11), both unpigmented; P (9–13), SS (1) and ES (3–4) unpigmented; sternal region with 4–5 additional setae arising from weakly sclerotized base. Mesothoracic spiracles annuliform and largest. Legs moderately long, 5-segmented; tibiotarsus with 23–25 setae; pretarsus large, strongly curved, basal tooth well developed, with 1 short seta (Fig. 5c). Abdomen. Segments I–VI with dorsal tubercles arranged in 3 transverse rows; Dai (5–8) on both sides separated, smaller than Dae (13–14); DLae (12–14) larger than DLai (7); Dpi (16–19), Dpe (15–19) and DLp (24–29) transverse, subequal in size; dorsal region with 5–10 small secondary tubercles; EP (23–27), P (12–13), PS-SS (parasternal and sternellar tubercles fused, 5–7) and ES (5–7) unpigmented; as1 (secondary tubercle on antero-exterior part of ES, 1) and as2 (secondary tubercle between P and PS, 1); sternal region with 3–4 additional setae arising from weakly sclerotized base. Segment VII with Dai and Dae fused and Dpi and Dpe fused. Segments VIII with dorsal and dorso-lateral tubercles completely fused (30–37). Segment IX with dorsal to epipleural tubercles completely fused (34–36). Segment X not visible from above, with paired pygopods. Spiracles annuliform, present on segments I–VIII.Host plantsBrassicaceae: Arabis pendula L.; Lamiaceae: Isodon inflexus (Thunb.) Kudo; Ranunculaceae: Aconitum pseudolaeve Nakai; Urticaceae: Urtica angustifolia Fisch. ex Hornem.Biological notesSuinzona borowieci sp. nov. is univoltine. Overwintered adults appear in late May. They mate and lay 15–18 eggs per cluster on the leaves of host plants in early June. Eggs are pale yellow to yellowish-orange and hatch after 8–9 days. The larvae are solitary during the instar stages and feed on the leaves. There are four larval instars, and pupation occurs in soil. The larvae take 14–16 days to pupate and then take 7–8 days to emerge as adults. Newly emerged adults are found during July. We observed larvae or adults of this species in nearby localities (~ 62 km), feeding on A. pendula L. (Fig. 6a) and U. angustifolia Fisch. ex Hornem. (Fig. 6b) from Yeongyang (at 1135 ~ 1190 m a.s.l.), A. pseudolaeve Nakai (Fig. 6c) from Taebaek (at 1,470 m a.s.l.), and I. inflexus (Thunb.) Kudo (Fig. 6d) from Yecheon (at 330 m a.s.l.). Each population showed a preference for its natural host plant but fed on other host plants and completed its life cycle in laboratory tests (Fig. 6e,f).
    Suinzona cyrtonoides (Jacoby, 1885) comb. nov. (Figs. 1, 2 and 3)Type localityJapan: Kyushu, Kumamoto Prefecture, Konose.Type materialSyntypes: 1 female (BMNH), Lectotype [mislabelled, not lectotype] // Type // DATA under card // Japan, G. Lewis, 1910–320. // Chrysomela crytonoides Jac. // Lectotype, Chrysomela crytonoides Jacoby, Designated. S. GE 2004 // Potaninia cyrtonoides Jacoby, Det. S. GE 2004 // Suinzona cyrtonoides (Jacoby, 1885) det. H.W. Cho 2014; 1 female (BMNH), Japan, G. Lewis, 1910–320. // Paralectotype // Paralectotype, Chrysomela crytonoides Jacoby, Designated. S. GE 2004 // Potaninia cyrtonoides Jacoby, Det. S. GE 2004 // Suinzona cyrtonoides (Jacoby, 1885) det. H.W. Cho 2014; 1 male (MCZC), Japan Lewis // 1st Jacoby Coll. // cyrtonoides Jac. // Type 17,474; 1 female (MCZC), Japan Lewis // 1st Jacoby Coll.Other materialJAPAN – Kyushu: 1 male (BMNH), Yuyama 1883 // Japan, G. Lewis, 1910–320. // Paralectotype [mislabelled, not type series] // Paralectotype, Chrysomela crytonoides Jacoby, Designated. S. GE 2004 // Potaninia cyrtonoides Jacoby, Det. S. GE 2004 // Suinzona cyrtonoides (Jacoby, 1885) det. H.W. Cho 2014; Honshu: 3 males 2 females (KMNH), Nippara, Okutama, Tokyo, 5.VI.1955, Y. Tominaga; 2 males 3 females (BMNH), Mt. Mitake, Ome-shi, Tokyo, 15.VII.2005, Y. Komiya; 1 male (HSC), Chichibu, Saitama Pref., 18.VI.1984, M. Minami; 1 male (HSC), Tochigi, Sano-shi, Tanuma, 4.VI.2008, H. Ohkawa; 1 male (HSC), Gumma, Fujioka-shi, Mikabo-yama rindo, 8.VI.2009, H. Ohkawa; 1 male 2 females (HSC), same data as preceding one except 21.VII.2009; 1 male 1 female (HSC), same data as preceding one except 1.V.2010; Shikoku: 1 female (HSC), Tokushima, Yoshinokawa-shi, Mt. Kotsu-zan, 18.V.1987, S. Mano; 2 females (EUMJ), Tokushima, Mt. Tsurugi, 15.VII.1984, M. Miyatake; 1 male 1 female (EUMJ), Ehime: Omogo-Sibukusa, Kamiukena-gun, 5.VI.2005, Y. Satoh; 7 males (HCC), Ehime, Kamiukena, Kumakogen, Wakayama, 33° 43′ 59.4″ N, 133° 08′ 06.5″ E, 5.VI.2019, H.W. Cho & Y. Hiroyuki; 1 male (HSC), Ehime, Saijo-shi, Mt. Ishizuchizan, 30.V.2009, H. Suenaga; 2 males (HSC), Ehime, Saijo-shi, Nishinokawa, 16.V.2010, H. Suenaga; 1 male 1 female (HSC), Ehime, Saijo-shi, Nishinokawa, 5.VI.2010, H. Suenaga; 1 female (EUMJ), Jiyoshi-toge, Ehime Pref., 26.IV.1976, A. Oda; 1 male (EUMJ), Mt. Ishizuchi, Ehime pref., 1.VI.1975, H. Kan; 1 female (EUMJ), Iwayaji, Ehime Pref., 1.VI.1969, M. Miyatake; 1 male (EUMJ), Ehime: Yokono, 750 m alt. Yanadani-mura, 7.V.1994, M. Sakai; 1 male (EUMJ), Ehime: Yokono, 660 m alt. Yanadani-mura, 6.V.1994, M. Sakai; 1 female (EUMJ), Ehime: Yokono, 700 m alt. Yanadani-mura, 15.VII.1994, M. Sakai.DistributionJapan: Honshu, Shikoku, Kyushu (Fig. 3a).Host plantsUrticaceae: Boehmeria spicata (Thunb.) Thunb., Boehmeria tricuspis (Hance) Makino.Biological notesDetailed descriptions of larvae and pupae and the life cycle have been published by Kimoto16 and Kimoto and Takizawa11. Its life cycle is similar to that of S. borowieci sp. nov., but they feed on different host plants.RemarksThe apical part of the aedeagus is highly variable, narrow to broad, apex narrowly to widely rounded or weakly truncate, mainly with two weak or strong denticles on the apicolateral margin. The aedeagus of the type specimen is narrowly rounded without apicolateral denticles (Fig. 2e). However, we were not able to find an obvious tendency in the morphological variation of the aedeagus at the intrapopulation or interpopulation level. Chrysomela cyrtonoides Jacoby, 1885 was described from Japan. Later, it was transferred to the genus Potaninia by Chûjô and Kimoto17 and then accepted by various authors until now. However, we found that all materials of P. cyrtonoides have reduced hind wings (Fig. 1d), which are the key diagnostic features of the genus Suinzona, and molecular analysis also suggests its placement in Suinzona. Therefore, Suinzona cyrtonoides (Jacoby, 1885) comb. nov. is proposed. Jacoby18 gave ‘Konose’ as the type locality and used at least two specimens collected by G. Lewis for the description. A male specimen (BMNH) from ‘Yuyama’, designated by Ge et al.3 as a lectotype, did not belong to the type series of S. cyrtonoides and thus lost its lectotype status (ICZN: Article 74.2). Indeed, a female specimen (BMNH) was mislabelled as a lectotype. We were able to find four specimens collected from Japan that might belong to the type series of S. cyrtonoides in the G. Lewis collection (BMNH, MCZC), but more precise locality data were not available. Therefore, we regard them as syntypes and defer selection of a lectotype.Molecular phylogenetic analysesIt is evident from the clarified phylogenetic inference based on mitogenomes that the genus Suinzona differs from the genus Potaninia, S. borowieci sp. nov. as the sister species of S. cyrtonoides (Fig. 7a). The phylogenetic inferences included a total of 20 mitogenomes of Chrysomelinae and outgroups of Galerucinae (Supplementary Table S1). The complete mitogenomes of the four Suinzona species and one Potaninia species (incomplete) were newly sequenced in the present study. Each mitogenome contains a typical set of mitochondrial genes (13 PCGs, 22 tRNAs and two rRNAs) and a control region. Phylogenetic trees based on ML and BI inferences revealed the presence of two well-supported clades (Chrysomelini and Doryphorini + Entomoscelini + Gonioctenini), placing the genus Suinzona as the sister group of the genus Potaninia. This result matched the morphological character of the hind wing. The COI haplotype network of the genus Suinzona complex (Fig. 7b) confirms the previous results and shows that the currently known single species is well distinguished as a species. Two independent networks were completely separated without any connection due to the existence of the mutation (62 steps) exceeding the 95% parsimony limits between them.Figure 7Phylogenetic tree and parsimonious network: (a) Bayesian consensus tree inferred from the combined mitochondrial 13 PCGs + 2 rRNA gene. Bayesian inference (left) and maximum likelihood (right) support values are shown on the branch nodes. Only the values over 70% are reported, (b) Parsimonious network of COI haplotypes. Circles correspond to haplotypes, the frequency and geographic origin of which are indicated by circle size. The geographical origins of the haplotypes are noted at the bottom right of the figure.Full size imageKey to Suinzona borowieci sp. nov. and related species1. Hind wings well developed (Fig. 1e); humeral calli present; trichobothria present on anterior angles of pronotum; lateral margins of pronotum distinctly visible from above. China, India, Laos, Myanmar, Thailand and Vietnam……………………………………………………………… Potaninia assamensis (Baly, 1879)– Hind wings reduced (Fig. 1c,d); humeral calli absent; trichobothria absent on anterior angles of pronotum; lateral margins of pronotum not or barely visible from above. China, Korea and Japan……………………… 22. Aedeagus with apex of flagellum quadrifid (Fig. 1f,g). South Korea, Japan……………. 3– Aedeagus with apex of flagellum varied in shape, but not quadrifid (see Ge et al.3 for key to 23 species). China (Sichuan, Yunnan)……………………………………………… Suinzona spp.3. Larger, body length 5.5–7.0 mm; elytra more densely punctate (Fig. 1a); aedeagus larger and broader (Fig. 2c). South Korea…………………………………. Suinzona borowieci sp. nov.– Smaller, body length 4.8–6.0 mm; elytra less densely punctate (Fig. 1d); aedeagus smaller and narrower (Fig. 2e). Japan…………………………….. Suinzona cyrtonoides (Jacoby, 1885) More

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    Unveiling African rainforest composition and vulnerability to global change

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    African forest maps reveal areas vulnerable to the effects of climate change

    Preserving the biodiversity of rainforests, and limiting the effects of climate change on them, are global challenges that are recognized in international policy agreements and commitments1. The Central African rainforests are the second largest area of continuous rainforest in the world, after the Amazon rainforest. They store more carbon per hectare than does the Amazon and, on average, have a higher density of large trees2 than does any other continent — a feature attributed to the effects of big herbivores, particularly elephants, on the competition between trees for light, water and space3. Human activities, notably logging and over-hunting, facilitated by an expanding road network4, pose a serious threat to Central African rainforests and their value for society5.
    Read the paper: Unveiling African rainforest composition and vulnerability to global change
    How important is climate change, when acting on top of these existing human-generated pressures, for the future of these rainforests? Writing in Nature, Réjou-Méchain et al.6 provide an answer, and show that expected changes in climate in the region pose serious risks to the rainforests. Some forests in locations that have so far been relatively undisturbed by humans are more vulnerable to climate change than are those in areas already affected. For those areas already affected, the lower tree diversity as a consequence of human intervention reduces the capacity of forests to respond to climate change.The authors had access to an impressive commercial forest-inventory data set from 105 logging concessions (designated areas in which commercial operators are allowed to harvest timber), across five Central African countries. Analysing the abundance distribution of 6.1 million trees across 185,665 plots, the authors generate maps of floristically unique forest types — forests characterized by distinct sets of tree species. The spatial extent of these forest types is predominantly shaped by climate gradients, with further effects arising from human-induced pressures and variation in soil type.Previous research into links between species distribution and environmental variation used approaches such as ecological niche models, which are mechanistic or correlative models that relate field observations of species with environmental variables to predict habitat suitability. But the resulting predictions of how various species will be affected by climate change have been highly uncertain. This is mainly because of sampling bias, challenges such as spatial autocorrelation (locations closer together in space tend to be more similar to each other than do locations farther apart)7, and high variation in the responses of individual species to environmental drivers of distribution, including human-induced factors.
    Satellites could soon map every tree on Earth
    Réjou-Méchain et al. instead applied a modelling approach called supervised component generalized linear regression, which can identify the main predictive factors from an array of possibilities. This enabled them to detect distribution patterns at the scale of species assemblages (the set of species in a community), rather than focusing on individual species, and to model species and assemblage distribution in response to predictive variables, such as those of climate and human pressures, that potentially show linear dependencies on each other (collinearity). Collinearity is a challenge in niche models, and commonly occurs between climate variables, producing results that are unreliable and difficult to interpret.By combining their approach with a method called cluster analysis, Réjou-Méchain and colleagues show that the Central African rainforests are not a single bloc of forests, but instead encompass at least ten distinct forest types. This includes climate-driven types of forest such as the Atlantic coastal evergreen forest in Gabon, which harbours tree species that prefer cool, dark areas for the dry season. Another grouping, semi-deciduous forest, is found along the northern margin of the Central African region studied, and is characterized by species that can tolerate higher rates of water loss to the atmosphere (evapotranspiration).Such spatial variability in the species composition of Central African rainforests has many implications. For example, it will affect forest vulnerability to climate change, how warming might interact with human pressures to change biodiversity, and how it might affect the potential of these forests to mitigate the rise in atmospheric carbon. Global warming is projected to result in a drier, hotter environment in Central Africa, and previous research has suggested potentially dangerous implications for the fate of the rainforests there8. They might respond to limited water availability by opening canopies and becoming more prone to fires and less carbon dense. Using climate-model projections for the year 2085, Réjou-Méchain and colleagues conclude that the current climate niches associated with the ten forest types they have identified might disappear, or move to locations that would be difficult for the forests to reach through dispersal of tree seeds (by means such as wind and animals), and would hence become inaccessible.
    Prioritizing where to restore Earth’s ecosystems
    What do these findings mean for the future, and how can we manage the forests to minimize the threat from climate change? To provide an answer, Réjou-Méchain et al. looked at three components that characterize the vulnerability of forest communities to warming: their sensitivity, exposure and adaptive capacity. The authors conclude that some areas are more sensitive than others, which means that the dominant tree species in some forest types will be less able to tolerate environmental change than will those in other areas — for example, species in the northern and southwestern edge of the rainforest. Some areas, particularly those in the east, are expected to be more exposed to climate change than others. And some, especially areas under pressure from human activities, have lower local biodiversity, and might thus have less capacity to adapt compared with areas of greater biodiversity.Réjou-Méchain et al. report that the areas most vulnerable to climate change and predicted to be highly vulnerable to future human-induced pressures include forests in coastal Gabon, the Democratic Republic of the Congo (Fig. 1) and the northern margin of the domain studied. This finding suggests priority regions for targeted actions to protect forests from environmental changes. One such region under human pressure is in Cameroon and contains a forest group called degraded semi-deciduous forest. Protecting this type of forest offers a fast way of generating a carbon sink that will operate over a long time frame9. This is because it features long-lived ‘pioneer’ taxa, which colonize areas after a disturbance — whether natural or human induced. Such species frequently have a high requirement for light, and in this region have the potential to reach great heights in the absence of further disturbance.

    Figure 1 | Kahuzi-Biéga National Park, Democratic Republic of the Congo. The road marks the boundary of this forest, which is one of the few remaining forest habitats for the eastern lowland gorilla (Gorilla beringei graueri). Rainforests are under threat from human-induced pressures, such as the deforestation visible outside this park. Réjou-Méchain et al.6 present maps of Central African rainforests that could aid conservation work.Credit: Adam Amir

    As for elsewhere in sub-Saharan Africa, climate-change predictions for 2085 are uncertain for Central Africa. Réjou-Méchain and colleagues’ projections for the effects of human pressures for that year are probably underestimates, especially considering that road expansions are likely to continue to push the frontier of wilderness deeper into remote forest areas. Nevertheless, the research offers convincing evidence enabling land users and managers to take decisive actions. This could include efforts to protect the areas most vulnerable to climate change from human pressures, for example by setting up protection schemes, and actions that could include boosting forest connectivity in areas that have already experienced high levels of human pressure. To ensure the effectiveness of any interventions, it will be imperative to engage with local people in developing management solutions. Conservation and the sustainable management of rainforest carbon stocks have key roles in the reduction of carbon emissions.Perhaps most crucially, rainforests in Central Africa and the ecosystem services they provide are intertwined with people’s livelihoods and food security. Developing sustainable management plans that recognize the diversity of the ways in which people interact with and depend on these forests will be a huge challenge. It will require concerted cross-disciplinary and cross-sectoral efforts that move beyond national boundaries. More

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    Substituting chemical P fertilizer with organic manure: effects on double-rice yield, phosphorus use efficiency and balance in subtropical China

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