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    Comparison of three different bioleaching systems for Li recovery from lepidolite

    Bioleaching kinetics
    Comparison of Li bioleaching by three various types of organisms (Fig. 1) revealed that the leaching kinetics in systems with yeast R. mucilaginosa was the fastest. Presence of Li in solution was detected at 6th day of the process. After initial faster bioleaching within first 6 days (285.5 µg l−1), there was a gradual decrease of Li concentration in solution due to Li bioaccumulation into the biomass up to 13th day and later stable Li concentration in range of 240–250 µg l−1 was observed suggesting that the rate of bioleaching and bioaccumulation were equal.
    Figure 1

    Kinetics of Li bioleaching from lepidolite by consortium of A. ferrooxidans and A. thiooxidans (bacteria), A. niger (fungi) and R. mucilaginosa (yeast) (A), long-term kinetics of Li bioleaching by bacteria (B) (fungi: initial ore concentration 10 g l−1, t = 21 °C, pH = 5.1, statically, standard medium, yeast: 10 g l−1, t = 21 °C, pH = 5.1, shaking 160 rpm, rich medium and bacteria: 10 g l−1, t = 30 °C, pH = 1.5, statically, poor medium).

    Full size image

    The lowest amount of Li was bioleached by fungi A. niger. Under this bioleaching conditions Li was for the first time observed in solution after 26 days of the process. Its concentration gradually increased later on. Again bioaccumulation was observed affecting the amount of Li in the solution.
    In the case of bacteria, medium composition was the most important for Li bioleaching. In nutrient rich medium for acidophilic chemoautotrophic acidithiobacilli which contained energy sources (Fe2+ ions and S0) no Li bioleaching was observed during the whole process time. However, in the medium with limited amount of nutrients and energy sources containing just sulphuric acid and elemental sulphur, Li+ ions presence was observed at 21st day for the first time. Bacteria were probably forced to utilize nutrients necessary for their life directly in the leached material. During the first 77 days the lithium bioleaching kinetics was very slow but this stage was followed by the sharp increase of bioleaching rate (400 times increase of the bioleaching rate was observed) resulting in 11 mg l−1 of solubilised Li at the end of the bioleaching experiments (after 336 days). The rapid change in the bioleaching rate might be attributed to the changes of mineral structure due to bacterial activity. No Li was found in control experiments using the media without microorganisms addition.
    Kinetic analysis
    To kinetically interpret the heterogeneous non-catalytic reaction for lepidolite bioleaching the shrinking core model (SCM) was used. The assumptions to use the model are based on the three facts—(i) mixed lepidolite particles are considered as nonporous particles, (ii) ore grains gradually shrank and (iii) the product layers form around the unreacted grains20. The development and verification of the model were previously described in details by several authors20,21.
    Experimental data obtained for all three studied bioleaching systems were substituted into both equations of SCM model. In the case of bacterial bioleaching a plot of 1−(1−X)1/3 versus time (Fig. 2) was found a straight line suggesting that chemical reaction and outer diffusion are the rate controlling steps of the process of bacterial bioleaching. Changes of rate constant, kr, (apparent from slopes of the plots) can be visible, as well. The linear relationship was obtained in the initial stage of bioleaching (R2 = 0.9944) and later at the day 77 the rate of the process changed but still showed the good fitting obtained by plotting 1−(1−X)1/3 versus time (R2 = 0.9991). This changes are very well visible also in the previous Fig. 1 showing the increase of Li+ ion concentration within the experimental period.
    Figure 2

    Plot of 1−(1−X)1/3 versus time for Li recovery by consortium of bacteria (initial ore concentration 10 g l−1, t = 30 °C, pH = 1.5, statically, poor media).

    Full size image

    However, the SCM model did not fit to the bioleaching data of two other bioleaching systems, using fungi and yeasts. Obviously, parallel bioaccumulation of Li+ ions into the biomass was responsible for considerably different bioleaching behaviour.
    Changes of pH
    Conditions of bioleaching experiments (pH, medium composition) were adjusted according the type of the microorganism used. Independently of conditions, the decrease of pH (Fig. 3) was recorded in all three bioleaching system. The most obvious decrease in pH occurred in bioleaching by microscopic fungi A. niger, with a pH decrease from 5.1 to 3 within first 12 days, followed by slow decrease to 2.5 until the end of the experiment. According to various authors22,23, it can be suggested that organic acids, considered the main fungal bioleaching agents, were produced. In the control medium a small increase in pH (from 5.2 to 5.6) was observed.
    Figure 3

    Changes of pH during bioleaching of lepidolite by consortium of A. ferrooxidans and A. thiooxidans (bacteria), A. niger (fungi) and R. mucilaginosa (yeast) (fungi: initial ore concentration 10 g l−1, t = 21 °C, pH = 5.1, statically, standard medium, yeast: 10 g l−1, t = 21 °C, pH = 5.1, shaking 160 rpm, rich medium and bacteria: 10 g l−1, t = 30 °C, pH = 1.5, statically, poor medium).

    Full size image

    A similar pattern was also observed in bacterial bioleaching, in which fast decrease of pH to 1.2 was observed during first 7 days followed by slow decrease to 0.9. Later the pH was stable in range of 0.9–1.2. Probably bacteria A. thiooxidans were mainly responsible for such pH decrease. In the control without bacteria addition the pH initially decreased from 1.5 to 1.3 and later increased and remained at 1.5.
    As shown in Fig. 3 fast pH decrease was observed during first 6 days of bioleaching with yeast R. mucilaginosa from initial 5.1 to 4.1. Later pH did not change until 20th day followed by slow decrease to 3.5 at 30th day. In control media, without microorganisms, pH value slowly increased from initial 5.1 to final 5.5.
    Bioleaching mechanisms
    According to obtained results different mechanisms can be suggested for lepidolite bioleaching by biological systems studied. Mechanisms of Li bioleaching from lepidolite by A. niger fungus may be attributed to combination of biochemical (due to organic acids production) and biomechanical (due to hyphae penetration) leaching mechanisms. Significant drop of pH values indicates increased concentration of organic acids in the media as the result of high metabolic activity of the A. niger cell what was confirmed by various authors studying bioleaching by the microscopic fungi14,22,23,24,25. However, lepidolite interpenetration by A. niger hyphae growing along cleavages was observed by SEM analysis of solid residue after bioleaching, as well (Supplementary Information, Fig. S1), suggesting that direct biomechanical deterioration of lepidolite was also a part of the whole lithium extraction mechanism. However, according to Gadd26 the biochemical activities of microorganisms play more significant role than mechanical degradation.
    Mechanisms of lepidolite bioleaching by bacteria is unknown. However, from abovementioned results it is obvious that no other substance except H+ ions contributed to the dissolution of Li+ ions. These results suggested that Li in lepidolite was dissolved by acid. Probably the mechanisms suggested by Liu et al.20 for leaching of lepidolite in sulphuric acid may be applied to bioleaching by acidophilic bacteria with sulphuric acid as a main bioleaching agent, as well. The main reaction of mixed alkali metal bioleaching may be expressed as follows:

    $$ {text{M}}_{{2}} {text{O }} + {text{ H}}_{{2}} {text{SO}}_{{4}} = {text{ M}}_{{2}} {text{SO}}_{{4}} + {text{ H}}_{{2}} {text{O}} $$
    (1)

    where M presents alkali metals. Metallic elements from lepidolite are dissolved to form metal sulphates and mixed alums in the solution resulting just in partial lepidolite dissolution20. Overal reaction of lepidolite bioleaching in sulphuric acid produced by bacteria may be adopted from Onalbaeva et al.11:

    $$ {text{3Li}}_{{2}} {text{O}}cdot{text{2K}}_{{2}} {text{O}}cdot{text{5Al}}_{{2}} {text{O}}_{{3}} cdot{1}0{text{SiO}}_{{2}} cdot{text{2SiF}}_{{4}} + { 2}0{text{H}}_{{2}} {text{SO}}_{{4}} = {text{ 3Li}}_{{2}} {text{SO}}_{{4}} + {text{ 2K}}_{{2}} {text{SO}}_{{4}} + {text{ 5Al}}_{{2}} left( {{text{SO}}_{{4}} } right)_{{3}} + {text{ 11SiO}}_{{2}} + {text{ H}}_{{2}} {text{SiF}}_{{6}} + {text{ 18H}}_{{2}} {text{O }} + {text{ 2HF}} $$
    (2)

    $$ {text{3Li}}_{{2}} {text{O}}cdot{text{2K}}_{{2}} {text{O}}cdot{text{5Al}}_{{2}} {text{O}}_{{3}} cdot{text{12SiO}}_{{2}} cdot{text{4H}}_{{2}} {text{O }} + { 2}0{text{H}}_{{2}} {text{SO}}_{{4}} = {text{ 3Li}}_{{2}} {text{SO}}_{{4}} + {text{ 2K}}_{{2}} {text{SO}}_{{4}} + {text{ 5Al}}_{{2}} left( {{text{SO}}_{{4}} } right)_{{3}} + {text{ 12SiO}}_{{2}} + {text{ 24H}}_{{2}} {text{O}} $$
    (3)

    Also Guo et al.27observed that increased H+ concentration catalysed the process of Li leaching from lepidolite via accelerating the protonation of the crystal lattices.
    X-ray diffraction analysis
    XRD analysis was applied in this study for phase identification and structural changes evaluation of samples before and after bioleaching in all three studied systems. Significant differences in mineralogical composition of leaching residue among the three studied bioleaching systems are visible from XRD spectra comparison (Supplementary Information, Fig. S2) suggesting that different mechanisms can be responsible for bioleaching. While bacterial bioleaching led to the disappearing of muscovite phase from XRD spectrum, the fungal bioleaching led to the appearance of new silicate phase (SiO2) and muscovite was found a dominant phase. According to Liu et al.20 presence of quartz in the spectrum at the end of the process may correspond with alkali metal dissolution from the silicate lattice. Phase changes were observed also after bioleaching by yeast R. mucilaginosa. Reallocation and significant decrease of diffraction peaks intensity was observed and similarly as in case of microscopic fungi muscovite has become a dominant phase while polylithionite phase significantly weakened. Based on the results, it can be suggested that the bioleaching mechanisms of lepidolite by fungi and yeast may be similar, however, in the case of bacteria the mechanisms might be significantly different. Further experiments are necessary to understand the mechanisms behind the lepidolite bioleaching.
    Li distribution
    Bioaccumulation of lithium into the biomass was observed when heterotrophic microorganisms A. niger and R. mucilaginosa were used (Fig. 4A). No bioaccumulation was found when bioleaching by consortium of acidophilic bacteria was studied. It can be suggested that the process of Li recovery by A. niger and R. mucilaginosa is a combination of two basic processes – initial bioleaching (metal solubilisation) followed by rapid bioaccumulation (intracellular lithium accumulation). It is possible that lithium bioaccumulation could significantly contribute to its solubilisation as released Li+ cations were fast accumulated in the cells and thus “pulled” the equilibrium resulting in the increased efficiency of the Li dissolution.
    Figure 4

    Distribution of Li between solution and biomass during bioleaching of lepidolite (A) and efficiency of the lepidolite bioleaching (B) by consortium of A. ferrooxidans and A. thiooxidans (bacteria), A. niger (fungi) and R. mucilaginosa (yeast) (fungi: initial ore concentration 10 g l−1, t = 21 °C, pH = 5.1, statically, standard medium, yeast: 10 g l−1, t = 21 °C, pH = 5.1, shaking 160 rpm, rich medium and bacteria: 10 g l−1, t = 30 °C, pH = 1.5, statically, poor medium).

    Full size image

    The highest amount of lithium was accumulated by R. mucilaginosa cells, representing 92% of the total amount of Li recovered from the ore. In the case of microscopic fungi A. niger, produced biomass accumulated 77% of the total solubilised Li. Distribution of Li between solution and biomass of particular microorganisms is shown in Fig. 4A. It is obvious that in both cases (fungi and yeast) bioaccumulation is dominant process of Li recovery and just small amount of Li+ ions remain in solution.
    Bioleaching efficiency
    The bioleaching efficiency is given as a sum of two processes – Li dissolution and its accumulation in the biomass. The final bioleaching yields for consortium of A. ferrooxidans and A. thiooxidans, fungi A. niger and R. mucilaginosa were found to be 8.8%, 0.2% and 1.1%, respectively. The results suggested that the most efficient among all three studied systems was the consortium of acidophilic bacteria A. ferrooxidans and A. thiooxidans (Fig. 4B) with the final bioleaching yield of almost 9%. On the other hand, very long time (336 days) was necessary for the process. Reichel et al.15 found 11% Li recovery from zinnwaldite using consortium of sulphur-oxidising bacteria, however, authors reported just 14 days for observed Li bioleaching efficiency although they do not found clear explanation of higher bioleaching efficiency in comparison with chemical leaching.
    The lowest bioleaching yield was observed when A. niger was used. Rezza et al.13,14 used A. niger for Li bioleaching from spodumene with highest recovery of 0.75 mg l−1 of lithium, they do not reported any bioaccumulation.
    Composition of medium had very strong effect on bioleaching efficiency by R. mucilaginosa as in nutrient rich medium due to significantly higher biomass production majority of Li has accumulated into the biomass resulting in 3 times higher final Li recovery. There were also morphological differences observed between yeasts cultivated in nutrient rich and poor environments with spherical shape and thin exopolymer layer of 0.48 µm for yeast from nutrient rich media in comparison with oval cells and thick exopolymer layer (1.8 µm) when cultivated in nutrient poor medium17.
    Despite of quite low bioleaching efficiency there is clearly visible potential of all three biological systems for Li recovery from hard rocks. Even with low Li concentration in solution after bioleaching, the lithium concentration in the leaching solution resembles the lithium concentration of sea water (0.1–0.2 mg l−1) and brines (0.1–2 g l−1) considered for economic recovery28,29. That shows that the leaching solution is generally suitable for further processing15.
    Due to the expensive separation of Li from leaching liquor, the conventional processing routes are likely not economic. However, ability of fungus A. niger and especially yeast R. mucilaginosa represent advantageous route of Li recovery after bioleaching. Thermal, chemical or microbiological process can be used to Li extraction from the biomass later on.
    Metabolic activity and hyphae penetration of microscopic fungi and yeasts resulted in significant structural changes of mineral enhancing the access of lithium by bioleaching agent. Maybe the combination of heterotrophic microorganisms (microscopic fungi or yeast) bioleaching leading to mineral structure changes with consequent bacterial bioleaching could bring better results in the future. More

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    Semi-automated identification of biological control agent using artificial intelligence

    Sampling of N. barkeri and related species
    Phytoseiid mites inhabit a variety of habitats, such as various plants and soil litters. Individuals were collected from plants and those on substrates and soil litters were isolated using Berlese’ funnels and kept in 95% alcohol. Samples were mounted in Hoyer’s medium and softened and cleaned with lactic acid if the mite body was hard. In addition, specimens were deposited at several institutes: GIABR (Guangdong Institute of Applied Biological Resources, Guangzhou, Guangdong, China), HUM (Hokkaido University Museum, Sapporo, Japan), NMNS (National Museum of Nature and Science, Tsukuba, Japan), NTU (Department of Entomology, National Taiwan University, Taipei, Taiwan), TARL (Taiwan Acari Research Laboratory, Taichung City, Taiwan). Female phytoseiid mites were collected, including 250 specimens of N. barkeri, and 262 specimens of 35 non-target species belonging to subfamily Amblyseiinae, in 6 tribes, and 11 genera. The following numbers of these non-target species were collected: 4 of N. baraki, 10 of N. longispinosus, 10 of N. makuwa, 6 of N. taiwanicus, 9 of N. womersleyi, 9 of Amblyseius alpinia, 10 of A. bellatulus, 10 of A. eharai, 10 of A. herbicolus, 2 of A. pascalis, 10 of A. tamatavensis, 10 of Euseius aizawai, 6 of E. circellatus, 7 of E. daluensis, 11 of E. macaranga, 10 of E. ovalis, 6 of E. paraovalis, 3 of E. nicholsi, 6 of E. oolong, 7 of E. sojaensis, 4 of Gynaeseius liturivorus, 3 of G. santosoi, 10 of Okiseius subtropicus, 4 of Paraamblyseius formosanus, 7 of Paraphytoseius chihpenensis, 10 of Parap. cracentis, 3 of Parap. hualienensis, 10 of Parap. orientalis, 6 of Phytoscutus salebrosus, 10 of Proprioseiopsis asetus, 3 of Prop. ovatus, 8 of Scapulaseius anuwati, 10 of S. cantonensis, 10 of S. okinawanus, and 8 of S. tienhsainensis. In addition, specimens of N. barkeri were collected from the United States, China, Israel, Japan, the Netherlands, Taiwan, and Thailand (including intercepted specimens in plant quarantine).
    Quantitative measurements of phytoseiid mites
    Specimens were examined under an Olympus BX51 microscope, and measurements were performed using a stage-calibrated ocular micrometer and ImageJ 1.4736. Photos were taken using a Motic Moticam 5+ camera attached to the microscope (Figure S1). All measurements were recorded in micrometres (μm). The general terminology used for morphological descriptions in this study conformed to that of Chant and McMurtry20. The notation for idiosomal setae conformed to that of Lindquist and Evans37 and Lindquist38, as adapted by Rowell et al.39 and Chant and Yoshida-Shaul32. Phytoseiid mites exhibit pronounced sexual dimorphism, and female individuals are more crucial for identification because of their distinguishing features and greater prevalence. In the present study, 22 quantitative measurements were collected from the female specimens: dorsal shield length and width; j1, j3, j4, j6, J5, z2, z4, z5, Z1, Z4, Z5, s4, r3, and R1 setae length; ventrianal shield length and width (at ZV2 level); JV5 length; St IV length; spermatheca calyx length, and spermatheca calyx width (Fig. 1, Table 1).
    XGBoost training and computing
    We used XGBoost to develop a classification system for target mite species and related species based on their morphological features. Among machine learning methods, XGBoost is the most efficient for implementing the gradient boosting decision tree algorithm from multiple decision trees, which are created successively. For each iteration, a tree enhances its predictive power by minimising the unexplained part of the last tree. First, we determined the number of decision trees through cross-validation. The original sample was randomly partitioned into five equally sized subsamples (Table S1). A single subsample and the other subsamples were retained for use as the validation and training data, respectively. Cross-validation was then performed five times, with each subsample used exactly once as the validation data. The number of decision trees allows the same level of performance to be achieved in training and validation. The number of decision trees was then used for the full dataset to create a final model, and key morphological features were selected for their relative importance. Next, we used ICE plots to indicate the determinative roles of these key features in classification. Plots in which one line represents one specimen indicate changes in predictions (of target species) that occur as a morphological feature change. We generated XGBoost and ICE plots by respectively using the R package “xgboost”40 and “pdp”41.
    Drawings
    Hand-drawn illustrations (Fig. 1) were made under an optic microscope (Olympus BX51). These drawings were first scanned, then processed and digitized with Photoshop CS6 (Adobe Systems Incorporated, USA). More

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    Importance of old bulls: leaders and followers in collective movements of all-male groups in African savannah elephants (Loxodonta africana)

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    Application of image processing to evidence for the persistence of the Ivory-billed Woodpecker (Campephilus principalis)

    The videos were imported from digital videotapes using iMovie 4 and iMovie HD 6.0.3. They were deinterlaced using JES Deinterlacer 3.8.4. Images are processed here using QuickTime Player 7.3.3, GraphicConverter 8.8.3, and GIMP 2.10. Within these applications, it is possible to interpolate and adjust brightness, contrast, color, and other parameters. The simple processing applied here is effective for some cases. With advanced processing techniques that involve greater control and analysis of parameters, experts in image processing might be able to extract additional information.
    The 2006 video
    The first video was obtained from a kayak with a Sony DCR-HC36 standard video camera (which captures interlaced video at 720 × 480 pixels) in the Pearl River swamp in Louisiana on February 20, 2006, in an area along English Bayou where there were five sightings that week; the ‘kent’ calls of the Ivory-billed Woodpecker were heard twice during the same period, once coming simultaneously from different directions. The 2006 video shows a large woodpecker perched on a tree, climbing upward, taking a short flight between limbs, and then taking off into a longer flight. Part of the perch tree, which includes two forks that facilitated scaling, was used in the size comparison in Fig. 2; the bird in the video appears to be larger than a Pileated Woodpecker specimen8. According to Julie Zickefoose, whose paintings of the Ivory-billed Woodpecker have appeared on the covers of the January 2006 issue of the Auk and both editions of Ref.3, the “long but fluffy and squared-off crest,” “extremely long, erect head and neck,” “large, long bill,” “bill to head proportions,” “rared-back pose,” “long and thin” wings, “flapping leap” between limbs, and “ponderous and heavy” flight are suggestive of the Ivory-billed Woodpecker but not the Pileated Woodpecker13.
    Figure 2

    A pileated Woodpecker specimen is mounted on part of the perch tree. Frames from the 2006 video were scaled using forks in the tree (dashed lines). A meter stick is placed at the point where the flight between limbs occurred. The inset shows Pileated Woodpecker and Ivory-billed Woodpecker specimens that were photographed side by side at the National Museum of Natural History. The bird in the video is partially hidden by vegetation in the image on the lower left, but it is fully in view in the images at the top when it took the flight between limbs.

    Full size image

    The 2008 video
    A short distance up the same bayou, another video was obtained with the same camera on March 29, 2008, from 23 m up a tree that was used as an observation platform for keeping watch for Ivory-billed Woodpeckers flying over the treetops in the distance. A large bird that flew along the bayou and passed below was identified as an Ivory-billed Woodpecker on the basis of two white stripes on the back and black leading edges and white trailing edges on the dorsal surfaces of the wings (those definitive field marks were observed from an ideal vantage point at close range and nearly directly above). The appearance in the video of the bird, its reflection from the still surface of the bayou, and reference objects made it possible to determine positions along the flight path and obtain estimates of the flight speed and wingspan. The bird in the 2008 video folded its wings closed during the middle of each upstroke as illustrated in Fig. 3. The two large woodpeckers are the only large birds north of the Rio Grande that have this distinctive wing motion, which is clearly resolved in the video. Using an approach that he had previously developed and applied to other woodpeckers17, Bret Tobalske, an expert on woodpecker flight mechanics, digitized the horizontal and vertical motions of the wingtips and concluded that the bird in the video is a large woodpecker13. The flap rate of the bird in the video is about ten standard deviations greater than the mean flap rate of the Pileated Woodpecker13.
    Figure 3

    Illustrations of large woodpeckers in flight. Left: The Pileated Woodpecker typically swoops upward a short distance before landing on a surface that faces the direction of approach; the Ivory-billed Woodpecker has long vertical ascents that allow time for maneuvering and landing on surfaces that do not face the direction of approach. Center: An Ivory-billed Woodpecker takes off with rapid wingbeats into a horizontal flight that quickly transitions into an upward swooping flight. Right: Illustration of a flight in the Pearl River swamp on March 29, 2008, that was viewed from 23 m up in a cypress tree. When the wings are folded closed in flight, the dorsal stripes and the white triangular patch have the same appearance as they do for the perched birds in Fig. 1. As discussed in Movie S6 of Ref.8, the wings of an Ivory-billed Woodpecker in a historical photo and of the bird in the 2008 video have the swept-back appearance of the wings in the middle image.

    Full size image

    Additional characteristics of the bird in the video that are consistent with the Ivory-billed Woodpecker but not the Pileated Woodpecker are the high flight speed, narrow wings, swept back wings, and prominent white patches on the dorsal surfaces of the wings8,13. There is one characteristic of the bird in the video that was initially thought to be inconsistent with the Ivory-billed Woodpecker. On the basis of historical accounts of a ‘duck-like’ flight, the Ivory-billed Woodpecker was thought to have a duck-like wing motion in which the wings remain extended throughout the flap cycle. In a series of paintings of the large woodpeckers in flight by Zickefoose18, the wings of the Pileated Woodpecker are correctly shown folding closed during the middle of the upstroke; in a proper representation of conventional wisdom at the time, the wings of the Ivory-billed Woodpecker are shown remaining extended throughout the flap cycle (duck-like flaps). An apparent paradox arose during the initial inspection of the video, which revealed an unexpected wing motion. The paradox was resolved after the discovery that a photo from 1939 shows an Ivory-billed Woodpecker in flight at an instant when the wings are nearly folded closed13.
    The 2007 video
    The other video was obtained with a Sony HDR-HC3 high-definition video camera (which captures interlaced video at 1,440 × 1,080 pixels) that was mounted on kayak paddles8 in the Choctawhatchee River swamp in Florida on January 19, 2007, in an area where an ornithologist and his colleagues had recently reported a series of sightings7. During an encounter with a pair of birds that were identified as Ivory-billed Woodpeckers on the basis of field marks and remarkable swooping flights, the camera captured a series of events that involve flights, field marks, and other behaviors and characteristics that are consistent with the Ivory-billed Woodpecker but no other species of the region. The analysis of the 2007 video is based in part on the fact that the probability of a series of unlikely events becomes extremely small as the number of events increases12. There is a downward swooping takeoff with a long horizontal glide that is consistent with the following account by Audubon15: “The transit from one tree to another, even should the distance be as much as a hundred yards, is performed by a single sweep, and the bird appears as if merely swinging from the top of the one tree to that of the other, forming an elegantly curved line.” There are upward swooping landings with long vertical ascents that are not consistent with the Pileated Woodpecker but are consistent with an account by Eckleberry of an Ivory-billed Woodpecker that “alighted with one magnificent upward swoop”19.
    A long vertical ascent allows time for maneuvering, and the bird appears to rotate about its axis during two of the ascents as illustrated in Fig. 3. In a film of the closely related Magellanic Woodpecker (Campephilus magellanicus)20, there is maneuvering during a landing with a long vertical ascent. During and after one of the ascents, a woodpecker in the 2007 video shows field marks and body proportions that are consistent with the Ivory-billed Woodpecker but no other species of the region. There is a takeoff into horizontal flight with deep and rapid flaps that are not consistent with the Pileated Woodpecker but are similar to the deep and rapid flaps during a takeoff of the closely related Imperial Woodpecker (Campephilus imperialis)21. In another event, a woodpecker climbs upward and engages in a series of behaviors that are consistent with the Ivory-billed Woodpecker but no other species of the region, including delivering a blow that produces an audible double knock and taking off with rapid wingbeats into a flight that immediately transitions into an upward swooping flight that is illustrated in Fig. 3. More

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    Evolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community

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