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      in Security

      Saving seaweed with machine learning

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      Last year, Charlene Xia ’17, SM ’20 found herself at a crossroads. She was finishing up her master’s degree in media arts and sciences from the MIT Media Lab and had just submitted applications to doctoral degree programs. All Xia could do was sit and wait. In the meantime, she narrowed down her career options, regardless of whether she was accepted to any program.

      “I had two thoughts: I’m either going to get a PhD to work on a project that protects our planet, or I’m going to start a restaurant,” recalls Xia.

      Xia poured over her extensive cookbook collection, researching international cuisines as she anxiously awaited word about her graduate school applications. She even looked into the cost of a food truck permit in the Boston area. Just as she started hatching plans to open a plant-based skewer restaurant, Xia received word that she had been accepted into the mechanical engineering graduate program at MIT.

      Shortly after starting her doctoral studies, Xia’s advisor, Professor David Wallace, approached her with an interesting opportunity. MathWorks, a software company known for developing the MATLAB computing platform, had announced a new seed funding program in MIT’s Department of Mechanical Engineering. The program encouraged collaborative research projects focused on the health of the planet.

      “I saw this as a super-fun opportunity to combine my passion for food, my technical expertise in ocean engineering, and my interest in sustainably helping our planet,” says Xia.

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      From MIT Mechanical Engineering: “Saving Seaweed with Machine Learning”

      Wallace knew Xia would be up to the task of taking an interdisciplinary approach to solve an issue related to the health of the planet. “Charlene is a remarkable student with extraordinary talent and deep thoughtfulness. She is pretty much fearless, embracing challenges in almost any domain with the well-founded belief that, with effort, she will become a master,” says Wallace.

      Alongside Wallace and Associate Professor Stefanie Mueller, Xia proposed a project to predict and prevent the spread of diseases in aquaculture. The team focused on seaweed farms in particular.

      Already popular in East Asian cuisines, seaweed holds tremendous potential as a sustainable food source for the world’s ever-growing population. In addition to its nutritive value, seaweed combats various environmental threats. It helps fight climate change by absorbing excess carbon dioxide in the atmosphere, and can also absorb fertilizer run-off, keeping coasts cleaner.

      As with so much of marine life, seaweed is threatened by the very thing it helps mitigate against: climate change. Climate stressors like warm temperatures or minimal sunlight encourage the growth of harmful bacteria such as ice-ice disease. Within days, entire seaweed farms are decimated by unchecked bacterial growth.

      To solve this problem, Xia turned to the microbiota present in these seaweed farms as a predictive indicator of any threat to the seaweed or livestock. “Our project is to develop a low-cost device that can detect and prevent diseases before they affect seaweed or livestock by monitoring the microbiome of the environment,” says Xia.

      The team pairs old technology with the latest in computing. Using a submersible digital holographic microscope, they take a 2D image. They then use a machine learning system known as a neural network to convert the 2D image into a representation of the microbiome present in the 3D environment.

      “Using a machine learning network, you can take a 2D image and reconstruct it almost in real time to get an idea of what the microbiome looks like in a 3D space,” says Xia.

      The software can be run in a small Raspberry Pi that could be attached to the holographic microscope. To figure out how to communicate these data back to the research team, Xia drew upon her master’s degree research.

      In that work, under the guidance of Professor Allan Adams and Professor Joseph Paradiso in the Media Lab, Xia focused on developing small underwater communication devices that can relay data about the ocean back to researchers. Rather than the usual $4,000, these devices were designed to cost less than $100, helping lower the cost barrier for those interested in uncovering the many mysteries of our oceans. The communication devices can be used to relay data about the ocean environment from the machine learning algorithms.

      By combining these low-cost communication devices along with microscopic images and machine learning, Xia hopes to design a low-cost, real-time monitoring system that can be scaled to cover entire seaweed farms.

      “It’s almost like having the ‘internet of things’ underwater,” adds Xia. “I’m developing this whole underwater camera system alongside the wireless communication I developed that can give me the data while I’m sitting on dry land.”

      Armed with these data about the microbiome, Xia and her team can detect whether or not a disease is about to strike and jeopardize seaweed or livestock before it is too late.

      While Xia still daydreams about opening a restaurant, she hopes the seaweed project will prompt people to rethink how they consider food production in general.

      “We should think about farming and food production in terms of the entire ecosystem,” she says. “My meta-goal for this project would be to get people to think about food production in a more holistic and natural way.” More

    • 63 Shares189 Views

      in Environment

      Making roadway spending more sustainable

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      The share of federal spending on infrastructure has reached an all-time low, falling from 30 percent in 1960 to just 12 percent in 2018.

      While the nation’s ailing infrastructure will require more funding to reach its full potential, recent MIT research finds that more sustainable and higher performing roads are still possible even with today’s limited budgets.

      The research, conducted by a team of current and former MIT Concrete Sustainability Hub (MIT CSHub) scientists and published in Transportation Research D, finds that a set of innovative planning strategies could improve pavement network environmental and performance outcomes even if budgets don’t increase.

      The paper presents a novel budget allocation tool and pairs it with three innovative strategies for managing pavement networks: a mix of paving materials, a mix of short- and long-term paving actions, and a long evaluation period for those actions.

      This novel approach offers numerous benefits. When applied to a 30-year case study of the Iowa U.S. Route network, the MIT CSHub model and management strategies cut emissions by 20 percent while sustaining current levels of road quality. Achieving this with a conventional planning approach would require the state to spend 32 percent more than it does today. The key to its success is the consideration of a fundamental — but fraught — aspect of pavement asset management: uncertainty.

      Predicting unpredictability

      The average road must last many years and support the traffic of thousands — if not millions — of vehicles. Over that time, a lot can change. Material prices may fluctuate, budgets may tighten, and traffic levels may intensify. Climate (and climate change), too, can hasten unexpected repairs.

      Managing these uncertainties effectively means looking long into the future and anticipating possible changes.

      “Capturing the impacts of uncertainty is essential for making effective paving decisions,” explains Fengdi Guo, the paper’s lead author and a departing CSHub research assistant.

      “Yet, measuring and relating these uncertainties to outcomes is also computationally intensive and expensive. Consequently, many DOTs [departments of transportation] are forced to simplify their analysis to plan maintenance — often resulting in suboptimal spending and outcomes.”

      To give DOTs accessible tools to factor uncertainties into their planning, CSHub researchers have developed a streamlined planning approach. It offers greater specificity and is paired with several new pavement management strategies.

      The planning approach, known as Probabilistic Treatment Path Dependence (PTPD), is based on machine learning and was devised by Guo.

      “Our PTPD model is composed of four steps,” he explains. “These steps are, in order, pavement damage prediction; treatment cost prediction; budget allocation; and pavement network condition evaluation.”

      The model begins by investigating every segment in an entire pavement network and predicting future possibilities for pavement deterioration, cost, and traffic.

      “We [then] run thousands of simulations for each segment in the network to determine the likely cost and performance outcomes for each initial and subsequent sequence, or ‘path,’ of treatment actions,” says Guo. “The treatment paths with the best cost and performance outcomes are selected for each segment, and then across the network.”

      The PTPD model not only seeks to minimize costs to agencies but also to users — in this case, drivers. These user costs can come primarily in the form of excess fuel consumption due to poor road quality.

      “One improvement in our analysis is the incorporation of electric vehicle uptake into our cost and environmental impact predictions,” Randolph Kirchain, a principal research scientist at MIT CSHub and MIT Materials Research Laboratory (MRL) and one of the paper’s co-authors. “Since the vehicle fleet will change over the next several decades due to electric vehicle adoption, we made sure to consider how these changes might impact our predictions of excess energy consumption.”

      After developing the PTPD model, Guo wanted to see how the efficacy of various pavement management strategies might differ. To do this, he developed a sophisticated deterioration prediction model.

      A novel aspect of this deterioration model is its treatment of multiple deterioration metrics simultaneously. Using a multi-output neural network, a tool of artificial intelligence, the model can predict several forms of pavement deterioration simultaneously, thereby, accounting for their correlations among one another.

      The MIT team selected two key metrics to compare the effectiveness of various treatment paths: pavement quality and greenhouse gas emissions. These metrics were then calculated for all pavement segments in the Iowa network.

      Improvement through variation

       The MIT model can help DOTs make better decisions, but that decision-making is ultimately constrained by the potential options considered.

      Guo and his colleagues, therefore, sought to expand current decision-making paradigms by exploring a broad set of network management strategies and evaluating them with their PTPD approach. Based on that evaluation, the team discovered that networks had the best outcomes when the management strategy includes using a mix of paving materials, a variety of long- and short-term paving repair actions (treatments), and longer time periods on which to base paving decisions.

      They then compared this proposed approach with a baseline management approach that reflects current, widespread practices: the use of solely asphalt materials, short-term treatments, and a five-year period for evaluating the outcomes of paving actions.

      With these two approaches established, the team used them to plan 30 years of maintenance across the Iowa U.S. Route network. They then measured the subsequent road quality and emissions.

      Their case study found that the MIT approach offered substantial benefits. Pavement-related greenhouse gas emissions would fall by around 20 percent across the network over the whole period. Pavement performance improved as well. To achieve the same level of road quality as the MIT approach, the baseline approach would need a 32 percent greater budget.

      “It’s worth noting,” says Guo, “that since conventional practices employ less effective allocation tools, the difference between them and the CSHub approach should be even larger in practice.”

      Much of the improvement derived from the precision of the CSHub planning model. But the three treatment strategies also play a key role.

      “We’ve found that a mix of asphalt and concrete paving materials allows DOTs to not only find materials best-suited to certain projects, but also mitigates the risk of material price volatility over time,” says Kirchain.

      It’s a similar story with a mix of paving actions. Employing a mix of short- and long-term fixes gives DOTs the flexibility to choose the right action for the right project.

      The final strategy, a long-term evaluation period, enables DOTs to see the entire scope of their choices. If the ramifications of a decision are predicted over only five years, many long-term implications won’t be considered. Expanding the window for planning, then, can introduce beneficial, long-term options.

      It’s not surprising that paving decisions are daunting to make; their impacts on the environment, driver safety, and budget levels are long-lasting. But rather than simplify this fraught process, the CSHub method aims to reflect its complexity. The result is an approach that provides DOTs with the tools to do more with less.

      This research was supported through the MIT Concrete Sustainability Hub by the Portland Cement Association and the Ready Mixed Concrete Research and Education Foundation. More