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    For plants, urban heat islands don’t mimic global warming

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    It’s tricky to predict precisely what the impacts of climate change will be, given the many variables involved. To predict the impacts of a warmer world on plant life, some researchers look at urban “heat islands,” where, because of the effects of urban structures, temperatures consistently run a few degrees higher than those of the surrounding rural areas. This enables side-by-side comparisons of plant responses.But a new study by researchers at MIT and Harvard University has found that, at least for forests, urban heat islands are a poor proxy for global warming, and this may have led researchers to underestimate the impacts of warming in some cases. The discrepancy, they found, has a lot to do with the limited genetic diversity of urban tree species.The findings appear in the journal PNAS, in a paper by MIT postdoc Meghan Blumstein, professor of civil and environmental engineering David Des Marais, and four others.“The appeal of these urban temperature gradients is, well, it’s already there,” says Des Marais. “We can’t look into the future, so why don’t we look across space, comparing rural and urban areas?” Because such data is easily obtainable, methods comparing the growth of plants in cities with similar plants outside them have been widely used, he says, and have been quite useful. Researchers did recognize some shortcomings to this approach, including significant differences in availability of some nutrients such as nitrogen. Still, “a lot of ecologists recognized that they weren’t perfect, but it was what we had,” he says.Most of the research by Des Marais’ group is lab-based, under conditions tightly controlled for temperature, humidity, and carbon dioxide concentration. While there are a handful of experimental sites where conditions are modified out in the field, for example using heaters around one or a few trees, “those are super small-scale,” he says. “When you’re looking at these longer-term trends that are occurring over space that’s quite a bit larger than you could reasonably manipulate, an important question is, how do you control the variables?”Temperature gradients have offered one approach to this problem, but Des Marais and his students have also been focusing on the genetics of the tree species involved, comparing those sampled in cities to the same species sampled in a natural forest nearby. And it turned out there were differences, even between trees that appeared similar.“So, lo and behold, you think you’re only letting one variable change in your model, which is the temperature difference from an urban to a rural setting,” he says, “but in fact, it looks like there was also a genotypic diversity that was not being accounted for.”The genetic differences meant that the plants being studied were not representative of those in the natural environment, and the researchers found that the difference was actually masking the impact of warming. The urban trees, they found, were less affected than their natural counterparts in terms of when the plants’ leaves grew and unfurled, or “leafed out,” in the spring.The project began during the pandemic lockdown, when Blumstein was a graduate student. She had a grant to study red oak genotypes across New England, but was unable to travel because of lockdowns. So, she concentrated on trees that were within reach in Cambridge, Massachusetts. She then collaborated with people doing research at the Harvard Forest, a research forest in rural central Massachusetts. They collected three years of data from both locations, including the temperature profiles, the leafing-out timing, and the genetic profiles of the trees. Though the study was looking at red oaks specifically, the researchers say the findings are likely to apply to trees broadly.At the time, researchers had just sequenced the oak tree genome, and that allowed Blumstein and her colleagues to look for subtle differences among the red oaks in the two locations. The differences they found showed that the urban trees were more resistant to the effects of warmer temperatures than were those in the natural environment.“Initially, we saw these results and we were sort of like, oh, this is a bad thing,” Des Marais says. “Ecologists are getting this heat island effect wrong, which is true.” Fortunately, this can be easily corrected by factoring in genomic data. “It’s not that much more work, because sequencing genomes is so cheap and so straightforward. Now, if someone wants to look at an urban-rural gradient and make these kinds of predictions, well, that’s fine. You just have to add some information about the genomes.”It’s not surprising that this genetic variation exists, he says, since growers have learned by trial and error over the decades which varieties of trees tend to thrive in the difficult urban environment, with typically poor soil, poor drainage, and pollution. “As a result, there’s just not much genetic diversity in our trees within cities.”The implications could be significant, Des Marais says. When the Intergovernmental Panel on Climate Change (IPCC) releases its regular reports on the status of the climate, “one of the tools the IPCC has to predict future responses to climate change with respect to temperature are these urban-to-rural gradients.” He hopes that these new findings will be incorporated into their next report, which is just being drafted. “If these results are generally true beyond red oaks, this suggests that the urban heat island approach to studying plant response to temperature is underpredicting how strong that response is.”The research team included Sophie Webster, Robin Hopkins, and David Basler from Harvard University and Jie Yun from MIT. The work was supported by the National Science Foundation, the Bullard Fellowship at the Harvard Forest, and MIT. More

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      in Environment

      MIT Maritime Consortium sets sail

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      Around 11 billion tons of goods, or about 1.5 tons per person worldwide, are transported by sea each year, representing about 90 percent of global trade by volume. Internationally, the merchant shipping fleet numbers around 110,000 vessels. These ships, and the ports that service them, are significant contributors to the local and global economy — and they’re significant contributors to greenhouse gas emissions.A new consortium, formalized in a signing ceremony at MIT last week, aims to address climate-harming emissions in the maritime shipping industry, while supporting efforts for environmentally friendly operation in compliance with the decarbonization goals set by the International Maritime Organization.“This is a timely collaboration with key stakeholders from the maritime industry with a very bold and interdisciplinary research agenda that will establish new technologies and evidence-based standards,” says Themis Sapsis, the William Koch Professor of Marine Technology at MIT and the director of MIT’s Center for Ocean Engineering. “It aims to bring the best from MIT in key areas for commercial shipping, such as nuclear technology for commercial settings, autonomous operation and AI methods, improved hydrodynamics and ship design, cybersecurity, and manufacturing.” Co-led by Sapsis and Fotini Christia, the Ford International Professor of the Social Sciences; director of the Institute for Data, Systems, and Society (IDSS); and director of the MIT Sociotechnical Systems Research Center, the newly-launched MIT Maritime Consortium (MC) brings together MIT collaborators from across campus, including the Center for Ocean Engineering, which is housed in the Department of Mechanical Engineering; IDSS, which is housed in the MIT Schwarzman College of Computing; the departments of Nuclear Science and Engineering and Civil and Environmental Engineering; MIT Sea Grant; and others, with a national and an international community of industry experts.The Maritime Consortium’s founding members are the American Bureau of Shipping (ABS), Capital Clean Energy Carriers Corp., and HD Korea Shipbuilding and Offshore Engineering. Innovation members are Foresight-Group, Navios Maritime Partners L.P., Singapore Maritime Institute, and Dorian LPG.“The challenges the maritime industry faces are challenges that no individual company or organization can address alone,” says Christia. “The solution involves almost every discipline from the School of Engineering, as well as AI and data-driven algorithms, and policy and regulation — it’s a true MIT problem.”Researchers will explore new designs for nuclear systems consistent with the techno-economic needs and constraints of commercial shipping, economic and environmental feasibility of alternative fuels, new data-driven algorithms and rigorous evaluation criteria for autonomous platforms in the maritime space, cyber-physical situational awareness and anomaly detection, as well as 3D printing technologies for onboard manufacturing. Collaborators will also advise on research priorities toward evidence-based standards related to MIT presidential priorities around climate, sustainability, and AI.MIT has been a leading center of ship research and design for over a century, and is widely recognized for contributions to hydrodynamics, ship structural mechanics and dynamics, propeller design, and overall ship design, and its unique educational program for U.S. Navy Officers, the Naval Construction and Engineering Program. Research today is at the forefront of ocean science and engineering, with significant efforts in fluid mechanics and hydrodynamics, acoustics, offshore mechanics, marine robotics and sensors, and ocean sensing and forecasting. The consortium’s academic home at MIT also opens the door to cross-departmental collaboration across the Institute.The MC will launch multiple research projects designed to tackle challenges from a variety of angles, all united by cutting-edge data analysis and computation techniques. Collaborators will research new designs and methods that improve efficiency and reduce greenhouse gas emissions, explore feasibility of alternative fuels, and advance data-driven decision-making, manufacturing and materials, hydrodynamic performance, and cybersecurity.“This consortium brings a powerful collection of significant companies that, together, has the potential to be a global shipping shaper in itself,” says Christopher J. Wiernicki SM ’85, chair and chief executive officer of ABS. “The strength and uniqueness of this consortium is the members, which are all world-class organizations and real difference makers. The ability to harness the members’ experience and know-how, along with MIT’s technology reach, creates real jet fuel to drive progress,” Wiernicki says. “As well as researching key barriers, bottlenecks, and knowledge gaps in the emissions challenge, the consortium looks to enable development of the novel technology and policy innovation that will be key. Long term, the consortium hopes to provide the gravity we will need to bend the curve.” More

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      in Security

      High-speed videos show what happens when a droplet splashes into a pool

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      Rain can freefall at speeds of up to 25 miles per hour. If the droplets land in a puddle or pond, they can form a crown-like splash that, with enough force, can dislodge any surface particles and launch them into the air.Now MIT scientists have taken high-speed videos of droplets splashing into a deep pool, to track how the fluid evolves, above and below the water line, frame by millisecond frame. Their work could help to predict how spashing droplets, such as from rainstorms and irrigation systems, may impact watery surfaces and aerosolize surface particles, such as pollen on puddles or pesticides in agricultural runoff.The team carried out experiments in which they dispensed water droplets of various sizes and from various heights into a pool of water. Using high-speed imaging, they measured how the liquid pool deformed as the impacting droplet hit the pool’s surface.Across all their experiments, they observed a common splash evolution: As a droplet hit the pool, it pushed down below the surface to form a “crater,” or cavity. At nearly the same time, a wall of liquid rose above the surface, forming a crown. Interestingly, the team observed that small, secondary droplets were ejected from the crown before the crown reached its maximum height. This entire evolution happens in a fraction of a second.

      “This cylinder-like wall of rising liquid, and how it evolves in time and space, is at the heart of everything,” Lydia Bourouiba says. GIF has been edited down to 5 frames per second.

      Image: Courtesy of the researchers; edited by MIT News

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      Scientists have caught snapshots of droplet splashes in the past, such as the famous “Milk Drop Coronet” — a photo of a drop of milk in mid-splash, taken by the late MIT professor Harold “Doc” Edgerton, who invented a photographic technique to capture quickly moving objects.The new work represents the first time scientists have used such high-speed images to model the entire splash dynamics of a droplet in a deep pool, combining what happens both above and below the surface. The team has used the imaging to gather new data central to build a mathematical model that predicts how a droplet’s shape will morph and merge as it hits a pool’s surface. They plan to use the model as a baseline to explore to what extent a splashing droplet might drag up and launch particles from the water pool.“Impacts of drops on liquid layers are ubiquitous,” says study author Lydia Bourouiba, a professor in the MIT departments of Civil and Environmental Engineering and Mechanical Engineering, and a core member of the Institute for Medical Engineering and Science (IMES). “Such impacts can produce myriads of secondary droplets that could act as carriers for pathogens, particles, or microbes that are on the surface of impacted pools or contaminated water bodies. This work is key in enabling prediction of droplet size distributions, and potentially also what such drops can carry with them.”Bourouiba and her mentees have published their results in the Journal of Fluid Mechanics. MIT co-authors include former graduate student Raj Dandekar PhD ’22, postdoc (Eric) Naijian Shen, and student mentee Boris Naar.Above and belowAt MIT, Bourouiba heads up the Fluid Dynamics of Disease Transmission Laboratory, part of the Fluids and Health Network, where she and her team explore the fundamental physics of fluids and droplets in a range of environmental, energy, and health contexts, including disease transmission. For their new study, the team looked to better understand how droplets impact a deep pool — a seemingly simple phenomenon that nevertheless has been tricky to precisely capture and characterize.Bourouiba notes that there have been recent breakthroughs in modeling the evolution of a splashing droplet below a pool’s surface. As a droplet hits a pool of water, it breaks through the surface and drags air down through the pool to create a short-lived crater. Until now, scientists have focused on the evolution of this underwater cavity, mainly for applications in energy harvesting. What happens above the water, and how a droplet’s crown-like shape evolves with the cavity below, remained less understood.“The descriptions and understanding of what happens below the surface, and above, have remained very much divorced,” says Bourouiba, who believes such an understanding can help to predict how droplets launch and spread chemicals, particles, and microbes into the air.Splash in 3DTo study the coupled dynamics between a droplet’s cavity and crown, the team set up an experiment to dispense water droplets into a deep pool. For the purposes of their study, the researchers considered a deep pool to be a body of water that is deep enough that a splashing droplet would remain far away from the pool’s bottom. In these terms, they found that a pool with a depth of at least 20 centimeters was sufficient for their experiments.They varied each droplet’s size, with an average diameter of about 5 millimeters. They also dispensed droplets from various heights, causing the droplets to hit the pool’s surface at different speeds, which on average was about 5 meters per second. The overall dynamics, Bourouiba says, should be similar to what occurs on the surface of a puddle or pond during an average rainstorm.“This is capturing the speed at which raindrops fall,” she says. “These wouldn’t be very small, misty drops. This would be rainstorm drops for which one needs an umbrella.”Using high-speed imaging techniques inspired by Edgerton’s pioneering photography, the team captured videos of pool-splashing droplets, at rates of up to 12,500 frames per second. They then applied in-house imaging processing methods to extract key measurements from the image sequences, such as the changing width and depth of the underwater cavity, and the evolving diameter and height of the rising crown. The researchers also captured especially tricky measurements, of the crown’s wall thickness profile and inner flow — the cylinder that rises out of the pool, just before it forms a rim and points that are characteristic of a crown.“This cylinder-like wall of rising liquid, and how it evolves in time and space, is at the heart of everything,” Bourouiba says. “It’s what connects the fluid from the pool to what will go into the rim and then be ejected into the air through smaller, secondary droplets.”The researchers worked the image data into a set of “evolution equations,” or a mathematical model that relates the various properties of an impacting droplet, such as the width of its cavity and the thickness and speed profiles of its crown wall, and how these properties change over time, given a droplet’s starting size and impact speed.“We now have a closed-form mathematical expression that people can use to see how all these quantities of a splashing droplet change over space and time,” says co-author Shen, who plans, with Bourouiba, to apply the new model to the behavior of secondary droplets and understanding how a splash end-up dispersing particles such as pathogens and pesticides. “This opens up the possibility to study all these problems of splash in 3D, with self-contained closed-formed equations, which was not possible before.”This research was supported, in part, by the Department of Agriculture-National Institute of Food and Agriculture Specialty Crop Research Initiative; the Richard and Susan Smith Family Foundation; the National Science Foundation; the Centers for Disease Control and Prevention-National Institute for Occupational Safety and Health; Inditex; and the National Institute of Allergy and Infectious Diseases of the National Institutes of Health. 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      in Environment

      3 Questions: Exploring the limits of carbon sequestration

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      As part of a multi-pronged approach toward curbing the effects of greenhouse gas emissions, scientists seek to better understand the impact of rising carbon dioxide (CO2) levels on terrestrial ecosystems, particularly tropical forests. To that end, climate scientist César Terrer, the Class of 1958 Career Development Assistant Professor of Civil and Environmental Engineering (CEE) at MIT, and colleague Josh Fisher of Chapman University are bringing their scientific minds to bear on a unique setting — an active volcano in Costa Rica — as a way to study carbon dioxide emissions and their influence. Elevated CO2 levels can lead to a phenomenon known as the CO2 fertilization effect, where plants grow more and absorb greater amounts of carbon, providing a cooling effect. While this effect has the potential to be a natural climate change mitigator, the extent of how much carbon plants can continue to absorb remains uncertain. There are growing concerns from scientists that plants may eventually reach a saturation point, losing their ability to offset increasing atmospheric CO2. Understanding these dynamics is crucial for accurate climate predictions and developing strategies to manage carbon sequestration. Here, Terrer discusses his innovative approach, his motivations for joining the project, and the importance of advancing this research.Q: Why did you get involved in this line of research, and what makes it unique?A: Josh Fisher, a climate scientist and long-time collaborator, had the brilliant idea to take advantage of naturally high CO2 levels near active volcanoes to study the fertilization effect in real-world conditions. Conducting such research in dense tropical forests like the Amazon — where the largest uncertainties about CO2 fertilization exist — is challenging. It would require large-scale CO2 tanks and extensive infrastructure to evenly distribute the gas throughout the towering trees and intricate canopy layers — a task that is not only logistically complex, but also highly costly. Our approach allows us to circumvent those obstacles and gather critical data in a way that hasn’t been done before.Josh was looking for an expert in the field of carbon ecology to co-lead and advance this research with him. My expertise of understanding the dynamics that regulate carbon storage in terrestrial ecosystems within the context of climate change made for a natural fit to co-lead and advance this research with him. This field has been central to my research, and was the focus of my PhD thesis.Our experiments inside the Rincon de la Vieja National Park are particularly exciting because CO2 concentrations in the areas near the volcano are four times higher than the global average. This gives us a rare opportunity to observe how elevated CO2 affects plant biomass in a natural setting — something that has never been attempted at this scale.Q: How are you measuring CO2 concentrations at the volcano?A: We have installed a network of 50 sensors in the forest canopy surrounding the volcano. These sensors continuously monitor CO2 levels, allowing us to compare areas with naturally high CO2 emissions from the volcano to control areas with typical atmospheric CO2 concentrations. The sensors are Bluetooth-enabled, requiring us to be in close proximity to retrieve the data. They will remain in place for a full year, capturing a continuous dataset on CO2 fluctuations. Our next data collection trip is scheduled for March, with another planned a year after the initial deployment.Q: What are the long-term goals of this research?A: Our primary objective is to determine whether the CO2 fertilization effect can be sustained, or if plants will eventually reach a saturation point, limiting their ability to absorb additional carbon. Understanding this threshold is crucial for improving climate models and carbon mitigation strategies.To expand the scope of our measurements, we are exploring the use of airborne technologies — such as drones or airplane-mounted sensors — to assess carbon storage across larger areas. This would provide a more comprehensive view of carbon sequestration potential in tropical ecosystems. Ultimately, this research could offer critical insights into the future role of forests in mitigating climate change, helping scientists and policymakers develop more accurate carbon budgets and climate projections. If successful, our approach could pave the way for similar studies in other ecosystems, deepening our understanding of how nature responds to rising CO2 levels. More

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      in Energy

      Reducing carbon emissions from residential heating: A pathway forward

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      In the race to reduce climate-warming carbon emissions, the buildings sector is falling behind. While carbon dioxide (CO2) emissions in the U.S. electric power sector dropped by 34 percent between 2005 and 2021, emissions in the building sector declined by only 18 percent in that same time period. Moreover, in extremely cold locations, burning natural gas to heat houses can make up a substantial share of the emissions portfolio. Therefore, steps to electrify buildings in general, and residential heating in particular, are essential for decarbonizing the U.S. energy system.But that change will increase demand for electricity and decrease demand for natural gas. What will be the net impact of those two changes on carbon emissions and on the cost of decarbonizing? And how will the electric power and natural gas sectors handle the new challenges involved in their long-term planning for future operations and infrastructure investments?A new study by MIT researchers with support from the MIT Energy Initiative (MITEI) Future Energy Systems Center unravels the impacts of various levels of electrification of residential space heating on the joint power and natural gas systems. A specially devised modeling framework enabled them to estimate not only the added costs and emissions for the power sector to meet the new demand, but also any changes in costs and emissions that result for the natural gas sector.The analyses brought some surprising outcomes. For example, they show that — under certain conditions — switching 80 percent of homes to heating by electricity could cut carbon emissions and at the same time significantly reduce costs over the combined natural gas and electric power sectors relative to the case in which there is only modest switching. That outcome depends on two changes: Consumers must install high-efficiency heat pumps plus take steps to prevent heat losses from their homes, and planners in the power and the natural gas sectors must work together as they make long-term infrastructure and operations decisions. Based on their findings, the researchers stress the need for strong state, regional, and national policies that encourage and support the steps that homeowners and industry planners can take to help decarbonize today’s building sector.A two-part modeling approachTo analyze the impacts of electrification of residential heating on costs and emissions in the combined power and gas sectors, a team of MIT experts in building technology, power systems modeling, optimization techniques, and more developed a two-part modeling framework. Team members included Rahman Khorramfar, a senior postdoc in MITEI and the Laboratory for Information and Decision Systems (LIDS); Morgan Santoni-Colvin SM ’23, a former MITEI graduate research assistant, now an associate at Energy and Environmental Economics, Inc.; Saurabh Amin, a professor in the Department of Civil and Environmental Engineering and principal investigator in LIDS; Audun Botterud, a principal research scientist in LIDS; Leslie Norford, a professor in the Department of Architecture; and Dharik Mallapragada, a former MITEI principal research scientist, now an assistant professor at New York University, who led the project. They describe their new methods and findings in a paper published in the journal Cell Reports Sustainability on Feb. 6.The first model in the framework quantifies how various levels of electrification will change end-use demand for electricity and for natural gas, and the impacts of possible energy-saving measures that homeowners can take to help. “To perform that analysis, we built a ‘bottom-up’ model — meaning that it looks at electricity and gas consumption of individual buildings and then aggregates their consumption to get an overall demand for power and for gas,” explains Khorramfar. By assuming a wide range of building “archetypes” — that is, groupings of buildings with similar physical characteristics and properties — coupled with trends in population growth, the team could explore how demand for electricity and for natural gas would change under each of five assumed electrification pathways: “business as usual” with modest electrification, medium electrification (about 60 percent of homes are electrified), high electrification (about 80 percent of homes make the change), and medium and high electrification with “envelope improvements,” such as sealing up heat leaks and adding insulation.The second part of the framework consists of a model that takes the demand results from the first model as inputs and “co-optimizes” the overall electricity and natural gas system to minimize annual investment and operating costs while adhering to any constraints, such as limits on emissions or on resource availability. The modeling framework thus enables the researchers to explore the impact of each electrification pathway on the infrastructure and operating costs of the two interacting sectors.The New England case study: A challenge for electrificationAs a case study, the researchers chose New England, a region where the weather is sometimes extremely cold and where burning natural gas to heat houses contributes significantly to overall emissions. “Critics will say that electrification is never going to happen [in New England]. It’s just too expensive,” comments Santoni-Colvin. But he notes that most studies focus on the electricity sector in isolation. The new framework considers the joint operation of the two sectors and then quantifies their respective costs and emissions. “We know that electrification will require large investments in the electricity infrastructure,” says Santoni-Colvin. “But what hasn’t been well quantified in the literature is the savings that we generate on the natural gas side by doing that — so, the system-level savings.”Using their framework, the MIT team performed model runs aimed at an 80 percent reduction in building-sector emissions relative to 1990 levels — a target consistent with regional policy goals for 2050. The researchers defined parameters including details about building archetypes, the regional electric power system, existing and potential renewable generating systems, battery storage, availability of natural gas, and other key factors describing New England.They then performed analyses assuming various scenarios with different mixes of home improvements. While most studies assume typical weather, they instead developed 20 projections of annual weather data based on historical weather patterns and adjusted for the effects of climate change through 2050. They then analyzed their five levels of electrification.Relative to business-as-usual projections, results from the framework showed that high electrification of residential heating could more than double the demand for electricity during peak periods and increase overall electricity demand by close to 60 percent. Assuming that building-envelope improvements are deployed in parallel with electrification reduces the magnitude and weather sensitivity of peak loads and creates overall efficiency gains that reduce the combined demand for electricity plus natural gas for home heating by up to 30 percent relative to the present day. Notably, a combination of high electrification and envelope improvements resulted in the lowest average cost for the overall electric power-natural gas system in 2050.Lessons learnedReplacing existing natural gas-burning furnaces and boilers with heat pumps reduces overall energy consumption. Santoni-Colvin calls it “something of an intuitive result” that could be expected because heat pumps are “just that much more efficient than old, fossil fuel-burning systems. But even so, we were surprised by the gains.”Other unexpected results include the importance of homeowners making more traditional energy efficiency improvements, such as adding insulation and sealing air leaks — steps supported by recent rebate policies. Those changes are critical to reducing costs that would otherwise be incurred for upgrading the electricity grid to accommodate the increased demand. “You can’t just go wild dropping heat pumps into everybody’s houses if you’re not also considering other ways to reduce peak loads. So it really requires an ‘all of the above’ approach to get to the most cost-effective outcome,” says Santoni-Colvin.Testing a range of weather outcomes also provided important insights. Demand for heating fuel is very weather-dependent, yet most studies are based on a limited set of weather data — often a “typical year.” The researchers found that electrification can lead to extended peak electric load events that can last for a few days during cold winters. Accordingly, the researchers conclude that there will be a continuing need for a “firm, dispatchable” source of electricity; that is, a power-generating system that can be relied on to produce power any time it’s needed — unlike solar and wind systems. As examples, they modeled some possible technologies, including power plants fired by a low-carbon fuel or by natural gas equipped with carbon capture equipment. But they point out that there’s no way of knowing what types of firm generators will be available in 2050. It could be a system that’s not yet mature, or perhaps doesn’t even exist today.In presenting their findings, the researchers note several caveats. For one thing, their analyses don’t include the estimated cost to homeowners of installing heat pumps. While that cost is widely discussed and debated, that issue is outside the scope of their current project.In addition, the study doesn’t specify what happens to existing natural gas pipelines. “Some homes are going to electrify and get off the gas system and not have to pay for it, leaving other homes with increasing rates because the gas system cost now has to be divided among fewer customers,” says Khorramfar. “That will inevitably raise equity questions that need to be addressed by policymakers.”Finally, the researchers note that policies are needed to drive residential electrification. Current financial support for installation of heat pumps and steps to make homes more thermally efficient are a good start. But such incentives must be coupled with a new approach to planning energy infrastructure investments. Traditionally, electric power planning and natural gas planning are performed separately. However, to decarbonize residential heating, the two sectors should coordinate when planning future operations and infrastructure needs. Results from the MIT analysis indicate that such cooperation could significantly reduce both emissions and costs for residential heating — a change that would yield a much-needed step toward decarbonizing the buildings sector as a whole. More

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      in Environment

      J-WAFS: Supporting food and water research across MIT

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      MIT’s Abdul Latif Jameel Water and Food Systems Lab (J-WAFS) has transformed the landscape of water and food research at MIT, driving faculty engagement and catalyzing new research and innovation in these critical areas. With philanthropic, corporate, and government support, J-WAFS’ strategic approach spans the entire research life cycle, from support for early-stage research to commercialization grants for more advanced projects.Over the past decade, J-WAFS has invested approximately $25 million in direct research funding to support MIT faculty pursuing transformative research with the potential for significant impact. “Since awarding our first cohort of seed grants in 2015, it’s remarkable to look back and see that over 10 percent of the MIT faculty have benefited from J-WAFS funding,” observes J-WAFS Executive Director Renee J. Robins ’83. “Many of these professors hadn’t worked on water or food challenges before their first J-WAFS grant.” By fostering interdisciplinary collaborations and supporting high-risk, high-reward projects, J-WAFS has amplified the capacity of MIT faculty to pursue groundbreaking research that addresses some of the world’s most pressing challenges facing our water and food systems.Drawing MIT faculty to water and food researchJ-WAFS open calls for proposals enable faculty to explore bold ideas and develop impactful approaches to tackling critical water and food system challenges. Professor Patrick Doyle’s work in water purification exemplifies this impact. “Without J-WAFS, I would have never ventured into the field of water purification,” Doyle reflects. While previously focused on pharmaceutical manufacturing and drug delivery, exposure to J-WAFS-funded peers led him to apply his expertise in soft materials to water purification. “Both the funding and the J-WAFS community led me to be deeply engaged in understanding some of the key challenges in water purification and water security,” he explains.Similarly, Professor Otto Cordero of the Department of Civil and Environmental Engineering (CEE) leveraged J-WAFS funding to pivot his research into aquaculture. Cordero explains that his first J-WAFS seed grant “has been extremely influential for my lab because it allowed me to take a step in a new direction, with no preliminary data in hand.” Cordero’s expertise is in microbial communities. He was previous unfamiliar with aquaculture, but he saw the relevance of microbial communities the health of farmed aquatic organisms.Supporting early-career facultyNew assistant professors at MIT have particularly benefited from J-WAFS funding and support. J-WAFS has played a transformative role in shaping the careers and research trajectories of many new faculty members by encouraging them to explore novel research areas, and in many instances providing their first MIT research grant.Professor Ariel Furst reflects on how pivotal J-WAFS’ investment has been in advancing her research. “This was one of the first grants I received after starting at MIT, and it has truly shaped the development of my group’s research program,” Furst explains. With J-WAFS’ backing, her lab has achieved breakthroughs in chemical detection and remediation technologies for water. “The support of J-WAFS has enabled us to develop the platform funded through this work beyond the initial applications to the general detection of environmental contaminants and degradation of those contaminants,” she elaborates. Karthish Manthiram, now a professor of chemical engineering and chemistry at Caltech, explains how J-WAFS’ early investment enabled him and other young faculty to pursue ambitious ideas. “J-WAFS took a big risk on us,” Manthiram reflects. His research on breaking the nitrogen triple bond to make ammonia for fertilizer was initially met with skepticism. However, J-WAFS’ seed funding allowed his lab to lay the groundwork for breakthroughs that later attracted significant National Science Foundation (NSF) support. “That early funding from J-WAFS has been pivotal to our long-term success,” he notes. These stories underscore the broad impact of J-WAFS’ support for early-career faculty, and its commitment to empowering them to address critical global challenges and innovate boldly.Fueling follow-on funding J-WAFS seed grants enable faculty to explore nascent research areas, but external funding for continued work is usually necessary to achieve the full potential of these novel ideas. “It’s often hard to get funding for early stage or out-of-the-box ideas,” notes J-WAFS Director Professor John H. Lienhard V. “My hope, when I founded J-WAFS in 2014, was that seed grants would allow PIs [principal investigators] to prove out novel ideas so that they would be attractive for follow-on funding. And after 10 years, J-WAFS-funded research projects have brought more than $21 million in subsequent awards to MIT.”Professor Retsef Levi led a seed study on how agricultural supply chains affect food safety, with a team of faculty spanning the MIT schools Engineering and Science as well as the MIT Sloan School of Management. The team parlayed their seed grant research into a multi-million-dollar follow-on initiative. Levi reflects, “The J-WAFS seed funding allowed us to establish the initial credibility of our team, which was key to our success in obtaining large funding from several other agencies.”Dave Des Marais was an assistant professor in the Department of CEE when he received his first J-WAFS seed grant. The funding supported his research on how plant growth and physiology are controlled by genes and interact with the environment. The seed grant helped launch his lab’s work addressing enhancing climate change resilience in agricultural systems. The work led to his Faculty Early Career Development (CAREER) Award from the NSF, a prestigious honor for junior faculty members. Now an associate professor, Des Marais’ ongoing project to further investigate the mechanisms and consequences of genomic and environmental interactions is supported by the five-year, $1,490,000 NSF grant. “J-WAFS providing essential funding to get my new research underway,” comments Des Marais.Stimulating interdisciplinary collaborationDes Marais’ seed grant was also key to developing new collaborations. He explains, “the J-WAFS grant supported me to develop a collaboration with Professor Caroline Uhler in EECS/IDSS [the Department of Electrical Engineering and Computer Science/Institute for Data, Systems, and Society] that really shaped how I think about framing and testing hypotheses. One of the best things about J-WAFS is facilitating unexpected connections among MIT faculty with diverse yet complementary skill sets.”Professors A. John Hart of the Department of Mechanical Engineering and Benedetto Marelli of CEE also launched a new interdisciplinary collaboration with J-WAFS funding. They partnered to join expertise in biomaterials, microfabrication, and manufacturing, to create printed silk-based colorimetric sensors that detect food spoilage. “The J-WAFS Seed Grant provided a unique opportunity for multidisciplinary collaboration,” Hart notes.Professors Stephen Graves in the MIT Sloan School of Management and Bishwapriya Sanyal in the Department of Urban Studies and Planning (DUSP) partnered to pursue new research on agricultural supply chains. With field work in Senegal, their J-WAFS-supported project brought together international development specialists and operations management experts to study how small firms and government agencies influence access to and uptake of irrigation technology by poorer farmers. “We used J-WAFS to spur a collaboration that would have been improbable without this grant,” they explain. Being part of the J-WAFS community also introduced them to researchers in Professor Amos Winter’s lab in the Department of Mechanical Engineering working on irrigation technologies for low-resource settings. DUSP doctoral candidate Mark Brennan notes, “We got to share our understanding of how irrigation markets and irrigation supply chains work in developing economies, and then we got to contrast that with their understanding of how irrigation system models work.”Timothy Swager, professor of chemistry, and Rohit Karnik, professor of mechanical engineering and J-WAFS associate director, collaborated on a sponsored research project supported by Xylem, Inc. through the J-WAFS Research Affiliate program. The cross-disciplinary research, which targeted the development of ultra-sensitive sensors for toxic PFAS chemicals, was conceived following a series of workshops hosted by J-WAFS. Swager and Karnik were two of the participants, and their involvement led to the collaborative proposal that Xylem funded. “J-WAFS funding allowed us to combine Swager lab’s expertise in sensing with my lab’s expertise in microfluidics to develop a cartridge for field-portable detection of PFAS,” says Karnik. “J-WAFS has enriched my research program in so many ways,” adds Swager, who is now working to commercialize the technology.Driving global collaboration and impactJ-WAFS has also helped MIT faculty establish and advance international collaboration and impactful global research. By funding and supporting projects that connect MIT researchers with international partners, J-WAFS has not only advanced technological solutions, but also strengthened cross-cultural understanding and engagement.Professor Matthew Shoulders leads the inaugural J-WAFS Grand Challenge project. In response to the first J-WAFS call for “Grand Challenge” proposals, Shoulders assembled an interdisciplinary team based at MIT to enhance and provide climate resilience to agriculture by improving the most inefficient aspect of photosynthesis, the notoriously-inefficient carbon dioxide-fixing plant enzyme RuBisCO. J-WAFS funded this high-risk/high-reward project following a competitive process that engaged external reviewers through a several rounds of iterative proposal development. The technical feedback to the team led them to researchers with complementary expertise from the Australian National University. “Our collaborative team of biochemists and synthetic biologists, computational biologists, and chemists is deeply integrated with plant biologists and field trial experts, yielding a robust feedback loop for enzyme engineering,” Shoulders says. “Together, this team will be able to make a concerted effort using the most modern, state-of-the-art techniques to engineer crop RuBisCO with an eye to helping make meaningful gains in securing a stable crop supply, hopefully with accompanying improvements in both food and water security.”Professor Leon Glicksman and Research Engineer Eric Verploegen’s team designed a low-cost cooling chamber to preserve fruits and vegetables harvested by smallholder farmers with no access to cold chain storage. J-WAFS’ guidance motivated the team to prioritize practical considerations informed by local collaborators, ensuring market competitiveness. “As our new idea for a forced-air evaporative cooling chamber was taking shape, we continually checked that our solution was evolving in a direction that would be competitive in terms of cost, performance, and usability to existing commercial alternatives,” explains Verploegen. Following the team’s initial seed grant, the team secured a J-WAFS Solutions commercialization grant, which Verploegen say “further motivated us to establish partnerships with local organizations capable of commercializing the technology earlier in the project than we might have done otherwise.” The team has since shared an open-source design as part of its commercialization strategy to maximize accessibility and impact.Bringing corporate sponsored research opportunities to MIT facultyJ-WAFS also plays a role in driving private partnerships, enabling collaborations that bridge industry and academia. Through its Research Affiliate Program, for example, J-WAFS provides opportunities for faculty to collaborate with industry on sponsored research, helping to convert scientific discoveries into licensable intellectual property (IP) that companies can turn into commercial products and services.J-WAFS introduced professor of mechanical engineering Alex Slocum to a challenge presented by its research affiliate company, Xylem: how to design a more energy-efficient pump for fluctuating flows. With centrifugal pumps consuming an estimated 6 percent of U.S. electricity annually, Slocum and his then-graduate student Hilary Johnson SM ’18, PhD ’22 developed an innovative variable volute mechanism that reduces energy usage. “Xylem envisions this as the first in a new category of adaptive pump geometry,” comments Johnson. The research produced a pump prototype and related IP that Xylem is working on commercializing. Johnson notes that these outcomes “would not have been possible without J-WAFS support and facilitation of the Xylem industry partnership.” Slocum adds, “J-WAFS enabled Hilary to begin her work on pumps, and Xylem sponsored the research to bring her to this point … where she has an opportunity to do far more than the original project called for.”Swager speaks highly of the impact of corporate research sponsorship through J-WAFS on his research and technology translation efforts. His PFAS project with Karnik described above was also supported by Xylem. “Xylem was an excellent sponsor of our research. Their engagement and feedback were instrumental in advancing our PFAS detection technology, now on the path to commercialization,” Swager says.Looking forwardWhat J-WAFS has accomplished is more than a collection of research projects; a decade of impact demonstrates how J-WAFS’ approach has been transformative for many MIT faculty members. As Professor Mathias Kolle puts it, his engagement with J-WAFS “had a significant influence on how we think about our research and its broader impacts.” He adds that it “opened my eyes to the challenges in the field of water and food systems and the many different creative ideas that are explored by MIT.” This thriving ecosystem of innovation, collaboration, and academic growth around water and food research has not only helped faculty build interdisciplinary and international partnerships, but has also led to the commercialization of transformative technologies with real-world applications. C. Cem Taşan, the POSCO Associate Professor of Metallurgy who is leading a J-WAFS Solutions commercialization team that is about to launch a startup company, sums it up by noting, “Without J-WAFS, we wouldn’t be here at all.”  As J-WAFS looks to the future, its continued commitment — supported by the generosity of its donors and partners — builds on a decade of success enabling MIT faculty to advance water and food research that addresses some of the world’s most pressing challenges. More

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      in Energy

      Puzzling out climate change

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      Shreyaa Raghavan’s journey into solving some of the world’s toughest challenges started with a simple love for puzzles. By high school, her knack for problem-solving naturally drew her to computer science. Through her participation in an entrepreneurship and leadership program, she built apps and twice made it to the semifinals of the program’s global competition.Her early successes made a computer science career seem like an obvious choice, but Raghavan says a significant competing interest left her torn.“Computer science sparks that puzzle-, problem-solving part of my brain,” says Raghavan ’24, an Accenture Fellow and a PhD candidate in MIT’s Institute for Data, Systems, and Society. “But while I always felt like building mobile apps was a fun little hobby, it didn’t feel like I was directly solving societal challenges.”Her perspective shifted when, as an MIT undergraduate, Raghavan participated in an Undergraduate Research Opportunity in the Photovoltaic Research Laboratory, now known as the Accelerated Materials Laboratory for Sustainability. There, she discovered how computational techniques like machine learning could optimize materials for solar panels — a direct application of her skills toward mitigating climate change.“This lab had a very diverse group of people, some from a computer science background, some from a chemistry background, some who were hardcore engineers. All of them were communicating effectively and working toward one unified goal — building better renewable energy systems,” Raghavan says. “It opened my eyes to the fact that I could use very technical tools that I enjoy building and find fulfillment in that by helping solve major climate challenges.”With her sights set on applying machine learning and optimization to energy and climate, Raghavan joined Cathy Wu’s lab when she started her PhD in 2023. The lab focuses on building more sustainable transportation systems, a field that resonated with Raghavan due to its universal impact and its outsized role in climate change — transportation accounts for roughly 30 percent of greenhouse gas emissions.“If we were to throw all of the intelligent systems we are exploring into the transportation networks, by how much could we reduce emissions?” she asks, summarizing a core question of her research.Wu, an associate professor in the Department of Civil and Environmental Engineering, stresses the value of Raghavan’s work.“Transportation is a critical element of both the economy and climate change, so potential changes to transportation must be carefully studied,” Wu says. “Shreyaa’s research into smart congestion management is important because it takes a data-driven approach to add rigor to the broader research supporting sustainability.”Raghavan’s contributions have been recognized with the Accenture Fellowship, a cornerstone of the MIT-Accenture Convergence Initiative for Industry and Technology. As an Accenture Fellow, she is exploring the potential impact of technologies for avoiding stop-and-go traffic and its emissions, using systems such as networked autonomous vehicles and digital speed limits that vary according to traffic conditions — solutions that could advance decarbonization in the transportation section at relatively low cost and in the near term.Raghavan says she appreciates the Accenture Fellowship not only for the support it provides, but also because it demonstrates industry involvement in sustainable transportation solutions.“It’s important for the field of transportation, and also energy and climate as a whole, to synergize with all of the different stakeholders,” she says. “I think it’s important for industry to be involved in this issue of incorporating smarter transportation systems to decarbonize transportation.”Raghavan has also received a fellowship supporting her research from the U.S. Department of Transportation.“I think it’s really exciting that there’s interest from the policy side with the Department of Transportation and from the industry side with Accenture,” she says.Raghavan believes that addressing climate change requires collaboration across disciplines. “I think with climate change, no one industry or field is going to solve it on its own. It’s really got to be each field stepping up and trying to make a difference,” she says. “I don’t think there’s any silver-bullet solution to this problem. It’s going to take many different solutions from different people, different angles, different disciplines.”With that in mind, Raghavan has been very active in the MIT Energy and Climate Club since joining about three years ago, which, she says, “was a really cool way to meet lots of people who were working toward the same goal, the same climate goals, the same passions, but from completely different angles.”This year, Raghavan is on the community and education team, which works to build the community at MIT that is working on climate and energy issues. As part of that work, Raghavan is launching a mentorship program for undergraduates, pairing them with graduate students who help the undergrads develop ideas about how they can work on climate using their unique expertise.“I didn’t foresee myself using my computer science skills in energy and climate,” Raghavan says, “so I really want to give other students a clear pathway, or a clear sense of how they can get involved.”Raghavan has embraced her area of study even in terms of where she likes to think.“I love working on trains, on buses, on airplanes,” she says. “It’s really fun to be in transit and working on transportation problems.”Anticipating a trip to New York to visit a cousin, she holds no dread for the long train trip.“I know I’m going to do some of my best work during those hours,” she says. “Four hours there. Four hours back.” More

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      in Environment

      Minimizing the carbon footprint of bridges and other structures

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      Awed as a young child by the majesty of the Golden Gate Bridge in San Francisco, civil engineer and MIT Morningside Academy for Design (MAD) Fellow Zane Schemmer has retained his fascination with bridges: what they look like, why they work, and how they’re designed and built.He weighed the choice between architecture and engineering when heading off to college, but, motivated by the why and how of structural engineering, selected the latter. Now he incorporates design as an iterative process in the writing of algorithms that perfectly balance the forces involved in discrete portions of a structure to create an overall design that optimizes function, minimizes carbon footprint, and still produces a manufacturable result.While this may sound like an obvious goal in structural design, it’s not. It’s new. It’s a more holistic way of looking at the design process that can optimize even down to the materials, angles, and number of elements in the nodes or joints that connect the larger components of a building, bridge, tower, etc.According to Schemmer, there hasn’t been much progress on optimizing structural design to minimize embodied carbon, and the work that exists often results in designs that are “too complex to be built in real life,” he says. The embodied carbon of a structure is the total carbon dioxide emissions of its life cycle: from the extraction or manufacture of its materials to their transport and use and through the demolition of the structure and disposal of the materials. Schemmer, who works with Josephine V. Carstensen, the Gilbert W. Winslow Career Development Associate Professor of Civil and Environmental Engineering at MIT, is focusing on the portion of that cycle that runs through construction.In September, at the IASS 2024 symposium “Redefining the Art of Structural Design in Zurich,” Schemmer and Carstensen presented their work on Discrete Topology Optimization algorithms that are able to minimize the embodied carbon in a bridge or other structure by up to 20 percent. This comes through materials selection that considers not only a material’s appearance and its ability to get the job done, but also the ease of procurement, its proximity to the building site, and the carbon embodied in its manufacture and transport.“The real novelty of our algorithm is its ability to consider multiple materials in a highly constrained solution space to produce manufacturable designs with a user-specified force flow,” Schemmer says. “Real-life problems are complex and often have many constraints associated with them. In traditional formulations, it can be difficult to have a long list of complicated constraints. Our goal is to incorporate these constraints to make it easier to take our designs out of the computer and create them in real life.”Take, for instance, a steel tower, which could be a “super lightweight, efficient design solution,” Schemmer explains. Because steel is so strong, you don’t need as much of it compared to concrete or timber to build a big building. But steel is also very carbon-intensive to produce and transport. Shipping it across the country or especially from a different continent can sharply increase its embodied carbon price tag. Schemmer’s topology optimization will replace some of the steel with timber elements or decrease the amount of steel in other elements to create a hybrid structure that will function effectively and minimize the carbon footprint. “This is why using the same steel in two different parts of the world can lead to two different optimized designs,” he explains.Schemmer, who grew up in the mountains of Utah, earned a BS and MS in civil and environmental engineering from University of California at Berkeley, where his graduate work focused on seismic design. He describes that education as providing a “very traditional, super-strong engineering background that tackled some of the toughest engineering problems,” along with knowledge of structural engineering’s traditions and current methods.But at MIT, he says, a lot of the work he sees “looks at removing the constraints of current societal conventions of doing things, and asks how could we do things if it was in a more ideal form; what are we looking at then? Which I think is really cool,” he says. “But I think sometimes too, there’s a jump between the most-perfect version of something and where we are now, that there needs to be a bridge between those two. And I feel like my education helps me see that bridge.”The bridge he’s referring to is the topology optimization algorithms that make good designs better in terms of decreased global warming potential.“That’s where the optimization algorithm comes in,” Schemmer says. “In contrast to a standard structure designed in the past, the algorithm can take the same design space and come up with a much more efficient material usage that still meets all the structural requirements, be up to code, and have everything we want from a safety standpoint.”That’s also where the MAD Design Fellowship comes in. The program provides yearlong fellowships with full financial support to graduate students from all across the Institute who network with each other, with the MAD faculty, and with outside speakers who use design in new ways in a surprising variety of fields. This helps the fellows gain a better understanding of how to use iterative design in their own work.“Usually people think of their own work like, ‘Oh, I had this background. I’ve been looking at this one way for a very long time.’ And when you look at it from an outside perspective, I think it opens your mind to be like, ‘Oh my God. I never would have thought about doing this that way. Maybe I should try that.’ And then we can move to new ideas, new inspiration for better work,” Schemmer says.He chose civil and structural engineering over architecture some seven years ago, but says that “100 years ago, I don’t think architecture and structural engineering were two separate professions. I think there was an understanding of how things looked and how things worked, and it was merged together. Maybe from an efficiency standpoint, it’s better to have things done separately. But I think there’s something to be said for having knowledge about how the whole system works, potentially more intermingling between the free-form architectural design and the mathematical design of a civil engineer. Merging it back together, I think, has a lot of benefits.”Which brings us back to the Golden Gate Bridge, Schemmer’s longtime favorite. You can still hear that excited 3-year-old in his voice when he talks about it.“It’s so iconic,” he says. “It’s connecting these two spits of land that just rise straight up out of the ocean. There’s this fog that comes in and out a lot of days. It’s a really magical place, from the size of the cable strands and everything. It’s just, ‘Wow.’ People built this over 100 years ago, before the existence of a lot of the computational tools that we have now. So, all the math, everything in the design, was all done by hand and from the mind. Nothing was computerized, which I think is crazy to think about.”As Schemmer continues work on his doctoral degree at MIT, the MAD fellowship will expose him to many more awe-inspiring ideas in other fields, leading him to incorporate some of these in some way with his engineering knowledge to design better ways of building bridges and other structures. More

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      in Environment

      An abundant phytoplankton feeds a global network of marine microbes

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      One of the hardest-working organisms in the ocean is the tiny, emerald-tinged Prochlorococcus marinus. These single-celled “picoplankton,” which are smaller than a human red blood cell, can be found in staggering numbers throughout the ocean’s surface waters, making Prochlorococcus the most abundant photosynthesizing organism on the planet. (Collectively, Prochlorococcus fix as much carbon as all the crops on land.) Scientists continue to find new ways that the little green microbe is involved in the ocean’s cycling and storage of carbon.Now, MIT scientists have discovered a new ocean-regulating ability in the small but mighty microbes: cross-feeding of DNA building blocks. In a study appearing today in Science Advances, the team reports that Prochlorococcus shed these extra compounds into their surroundings, where they are then “cross-fed,” or taken up by other ocean organisms, either as nutrients, energy, or for regulating metabolism. Prochlorococcus’ rejects, then, are other microbes’ resources.What’s more, this cross-feeding occurs on a regular cycle: Prochlorococcus tend to shed their molecular baggage at night, when enterprising microbes quickly consume the cast-offs. For a microbe called SAR11, the most abundant bacteria in the ocean, the researchers found that the nighttime snack acts as a relaxant of sorts, forcing the bacteria to slow down their metabolism and effectively recharge for the next day.Through this cross-feeding interaction, Prochlorococcus could be helping many microbial communities to grow sustainably, simply by giving away what it doesn’t need. And they’re doing so in a way that could set the daily rhythms of microbes around the world.“The relationship between the two most abundant groups of microbes in ocean ecosystems has intrigued oceanographers for years,” says co-author and MIT Institute Professor Sallie “Penny” Chisholm, who played a role in the discovery of Prochlorococcus in 1986. “Now we have a glimpse of the finely tuned choreography that contributes to their growth and stability across vast regions of the oceans.”Given that Prochlorococcus and SAR11 suffuse the surface oceans, the team suspects that the exchange of molecules from one to the other could amount to one of the major cross-feeding relationships in the ocean, making it an important regulator of the ocean carbon cycle.“By looking at the details and diversity of cross-feeding processes, we can start to unearth important forces that are shaping the carbon cycle,” says the study’s lead author, Rogier Braakman, a research scientist in MIT’s Department of Earth, Atmospheric and Planetary Sciences (EAPS).Other MIT co-authors include Brandon Satinsky, Tyler O’Keefe, Shane Hogle, Jamie Becker, Robert Li, Keven Dooley, and Aldo Arellano, along with Krista Longnecker, Melissa Soule, and Elizabeth Kujawinski of Woods Hole Oceanographic Institution (WHOI).Spotting castawaysCross-feeding occurs throughout the microbial world, though the process has mainly been studied in close-knit communities. In the human gut, for instance, microbes are in close proximity and can easily exchange and benefit from shared resources.By comparison, Prochlorococcus are free-floating microbes that are regularly tossed and mixed through the ocean’s surface layers. While scientists assume that the plankton are involved in some amount of cross-feeding, exactly how this occurs, and who would benefit, have historically been challenging to probe; any stuff that Prochlorococcus cast away would have vanishingly low concentrations,and be exceedingly difficult to measure.But in work published in 2023, Braakman teamed up with scientists at WHOI, who pioneered ways to measure small organic compounds in seawater. In the lab, they grew various strains of Prochlorococcus under different conditions and characterized what the microbes released. They found that among the major “exudants,” or released molecules, were purines and pyridines, which are molecular building blocks of DNA. The molecules also happen to be nitrogen-rich — a fact that puzzled the team. Prochlorococcus are mainly found in ocean regions that are low in nitrogen, so it was assumed they’d want to retain any and all nitrogen-containing compounds they can. Why, then, were they instead throwing such compounds away?Global symphonyIn their new study, the researchers took a deep dive into the details of Prochlorococcus’ cross-feeding and how it influences various types of ocean microbes.They set out to study how Prochlorococcus use purine and pyridine in the first place, before expelling the compounds into their surroundings. They compared published genomes of the microbes, looking for genes that encode purine and pyridine metabolism. Tracing the genes forward through the genomes, the team found that once the compounds are produced, they are used to make DNA and replicate the microbes’ genome. Any leftover purine and pyridine is recycled and used again, though a fraction of the stuff is ultimately released into the environment. Prochlorococcus appear to make the most of the compounds, then cast off what they can’t.The team also looked to gene expression data and found that genes involved in recycling purine and pyrimidine peak several hours after the recognized peak in genome replication that occurs at dusk. The question then was: What could be benefiting from this nightly shedding?For this, the team looked at the genomes of more than 300 heterotrophic microbes — organisms that consume organic carbon rather than making it themselves through photosynthesis. They suspected that such carbon-feeders could be likely consumers of Prochlorococcus’ organic rejects. They found most of the heterotrophs contained genes that take up either purine or pyridine, or in some cases, both, suggesting microbes have evolved along different paths in terms of how they cross-feed.The group zeroed in on one purine-preferring microbe, SAR11, as it is the most abundant heterotrophic microbe in the ocean. When they then compared the genes across different strains of SAR11, they found that various types use purines for different purposes, from simply taking them up and using them intact to breaking them down for their energy, carbon, or nitrogen. What could explain the diversity in how the microbes were using Prochlorococcus’ cast-offs?It turns out the local environment plays a big role. Braakman and his collaborators performed a metagenome analysis in which they compared the collectively sequenced genomes of all microbes in over 600 seawater samples from around the world, focusing on SAR11 bacteria. Metagenome sequences were collected alongside measurements of various environmental conditions and geographic locations in which they are found. This analysis showed that the bacteria gobble up purine for its nitrogen when the nitrogen in seawater is low, and for its carbon or energy when nitrogen is in surplus — revealing the selective pressures shaping these communities in different ocean regimes.“The work here suggests that microbes in the ocean have developed relationships that advance their growth potential in ways we don’t expect,” says co-author Kujawinski.Finally, the team carried out a simple experiment in the lab, to see if they could directly observe a mechanism by which purine acts on SAR11. They grew the bacteria in cultures, exposed them to various concentrations of purine, and unexpectedly found it causes them to slow down their normal metabolic activities and even growth. However, when the researchers put these same cells under environmentally stressful conditions, they continued growing strong and healthy cells, as if the metabolic pausing by purines helped prime them for growth, thereby avoiding the effects of the stress.“When you think about the ocean, where you see this daily pulse of purines being released by Prochlorococcus, this provides a daily inhibition signal that could be causing a pause in SAR11 metabolism, so that the next day when the sun comes out, they are primed and ready,” Braakman says. “So we think Prochlorococcus is acting as a conductor in the daily symphony of ocean metabolism, and cross-feeding is creating a global synchronization among all these microbial cells.”This work was supported, in part, by the Simons Foundation and the National Science Foundation. More