Quantitative genetic architecture of adaptive phenology traits in the deciduous tree, Populus trichocarpa (Torr. and Gray)

Adams HD, Collins AD, Briggs SP, Vennetier M, Dickman LT, Sevanto SA et al. (2015) Experimental drought and heat can delay phenological development and reduce foliar and shoot growth in semiarid trees. Glob Change Biol 21:4210–4220

Google Scholar 

Basler D, Körner C (2012) Photoperiod sensitivity of bud burst in 14 temperate forest tree species. Agric For Meteorol 165:73–81

Google Scholar 

Bhalerao R, Keskitalo J, Sterky F, Erlandsson R, Björkbacka H, Birve SJ et al. (2003) Gene expression in autumn leaves. Plant Physiol 131:430–442

PubMed  PubMed Central  Google Scholar 

Bradshaw HD, Stettler RF (1995) Molecular genetics of growth and development in populus. IV. Mapping QTLs with large effects on growth, form, and phenology traits in a forest tree. Genetics 139:963–973

CAS  PubMed  Google Scholar 

Brelsford CC, Nybakken L, Kotilainen TK, Robson TM (2019) The influence of spectral composition on spring and autumn phenology in trees. Tree Physiol 39:925–950

CAS  PubMed  Google Scholar 

Christensen K, Frederiksen H, Vaupel JW, McGue M (2003) Age trajectories of genetic variance in physical functioning: a longitudinal study of Danish twins aged 70 years and older. Behav Genet 33:125–136

PubMed  Google Scholar 

Chuine I (2010) Why does phenology drive species distribution? Philos Trans R Soc B 365:3149–3160

Google Scholar 

Class B, Brommer JE (2020) Can dominance genetic variance be ignored in evolutionary quantitative genetic analyses of wild populations? Evolution 74:1540–1550

PubMed  Google Scholar 

Cong N, Shen M, Piao S (2016) Spatial variations in responses of vegetation autumn phenology to climate change on the Tibetan Plateau. J Plant Ecol 10:744–752.

Google Scholar 

Costa e Silva J, Borralho NMG, Potts BM (2004) Additive and non-additive genetic parameters from clonally replicated and seedling progenies of Eucalyptus globulus. Theor Appl Genet 108:1113–1119

PubMed  Google Scholar 

Cronk QCB (2005) Plant eco‐devo: the potential of poplar as a model organism. N Phytologist 166:39–48

CAS  Google Scholar 

Evans LM, Slavov GT, Rodgers-Melnick E, Martin J, Ranjan P, Muchero W et al. (2014) Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations. Nat Genet 46:1089

CAS  PubMed  Google Scholar 

Fabbrini F, Gaudet M, Bastien C, Zaina G, Harfouche A, Beritognolo I et al. (2012) Phenotypic plasticity, QTL mapping and genomic characterization of bud set in black poplar. BMC Plant Biol 12:47

CAS  PubMed  PubMed Central  Google Scholar 

Falconer DS, Mackay TFC (1996) Introduction to quantitative genetics. 4th edn. Longman

Fracheboud Y, Luquez V, Björkén L, Sjödin A, Tuominen H, Jansson S (2009) The control of autumn senescence in European Aspen. Plant Physiol 149:1982–1991

CAS  PubMed  PubMed Central  Google Scholar 

Hadfield JD (2010) MCMC methods for multi-response generalized linear mixed models: the MCMCglmm R package. J Stat Softw 33:1–22.

Google Scholar 

Horvath DP, Anderson JV, Chao WS, Foley ME (2003) Knowing when to grow: signals regulating bud dormancy. Trends Plant Sci 8:534–540

CAS  PubMed  Google Scholar 

Howe GT, Aitken SN, Neale DB, Jermstad KD, Wheeler NC, Chen THH (2003) From genotype to phenotype: unraveling the complexities of cold adaptation in forest trees. Can J Bot 81:1247–1266

CAS  Google Scholar 

Howe GT, Saruul P, Davis J, Chen THH (2000) Quantitative genetics of bud phenology, frost damage, and winter survival in an F2 family of hybrid poplars. Theor Appl Genet 101:632–642

Google Scholar 

Ingvarsson PK, Garcia MV, Luquez V, Hall D, Jansson S (2008) Nucleotide polymorphism and phenotypic associations Within and Around the phytochrome B2 Locus in European Aspen (Populus tremula, Salicaceae). Genetics 178:2217

CAS  PubMed  PubMed Central  Google Scholar 

Jansson S, Douglas CJ (2007) Populus: a model system for plant biology. Annu Rev Plant Biol 58:435–458

CAS  PubMed  Google Scholar 

Karacic A, Verwijst T, Weih M (2003) Above-ground woody biomass production of short-rotation populus plantations on agricultural land in Sweden. Scand J For Res 18:427–437

Google Scholar 

Kennedy BW, Schaeffer LR (1989) Genetic evaluation under an animal model when identical genotypes are represented in the population. J Anim Sci 67:1946–1955

Google Scholar 

Keskitalo J, Bergquist G, Gardeström P, Jansson S (2005) A cellular timetable of autumn senescence. Plant Physiol 139:1635–1648

CAS  PubMed  PubMed Central  Google Scholar 

Lagercrantz ULF (2009) At the end of the day: a common molecular mechanism for photoperiod responses in plants? J Exp Bot 60:2501–2515

CAS  PubMed  Google Scholar 

Leuchner M, Menzel A, Werner H (2007) Quantifying the relationship between light quality and light availability at different phenological stages within a mature mixed forest. Agric For Meteorol 142:35–44

Google Scholar 

Luquez V, Hall D, Albrectsen BR, Karlsson J, Ingvarsson P, Jansson S (2008) Natural phenological variation in aspen (Populus tremula): the SwAsp collection. Tree Genet Genomes 4:279–292

Google Scholar 

Lynch M, Walsh B (1998) Genetics and analysis of quantitative traits. Sinauer Sunderland

MacKenzie CM, Primack RB, Miller-Rushing AJ (2018) Local environment, not local adaptation, drives leaf-out phenology in common gardens along an elevational gradient in Acadia National Park, Maine. Am J Bot 105:986–995

Google Scholar 

Marron N, Storme V, Dillen SY, Bastien C, Ricciotti L, Salani F et al. (2010) Genomic regions involved in productivity of two interspecific poplar families in Europe. 2. Biomass production and its relationships with tree architecture and phenology. Tree Genet Genomes 6:533–554

Google Scholar 

McKown AD, Guy RD, Klápště J, Geraldes A, Friedmann M, Cronk QC et al. (2014a) Geographical and environmental gradients shape phenotypic trait variation and genetic structure in Populus trichocarpa. N. Phytologist 201:1263–1276

CAS  Google Scholar 

McKown AD, Klápště J, Guy RD, Geraldes A, Porth I, Hannemann J et al. (2014b) Genome‐wide association implicates numerous genes underlying ecological trait variation in natural populations of Populus trichocarpa. N. Phytologist 203:535–553

CAS  Google Scholar 

McKown AD, Klápště J, Guy RD, El-Kassaby YA, Mansfield SD (2018) Ecological genomics of variation in bud-break phenology and mechanisms of response to climate warming in Populus trichocarpa. N. Phytologist 220:300–316

CAS  Google Scholar 

Michelson I, Ingvarsson Pär K, Robinson Kathryn M, Edlund E, Eriksson Maria E, Nilsson O et al. (2017) Autumn senescence in aspen is not triggered by day length. Physiol Plant 162:123–134

PubMed  Google Scholar 

Olson M, Levsen N, Soolanayakanahally Raju Y, Guy Robert D, Schroeder William R, Keller Stephen R et al. (2013) The adaptive potential of Populus balsamifera L. to phenology requirements in a warmer global climate. Mol Ecol 22:1214–1230

CAS  PubMed  Google Scholar 

Pliura A, Suchockas V, Sarsekova D, Gudynaitė V (2014) Genotypic variation and heritability of growth and adaptive traits, and adaptation of young poplar hybrids at northern margins of natural distribution of Populus nigra in Europe. Biomass Bioenergy 70:513–529

Google Scholar 

Polgar CA, Primack RB (2011) Leaf‐out phenology of temperate woody plants: from trees to ecosystems. N Phytologist 191:926–941

Google Scholar 

Porth I, El‐Kassaby YA (2015) Using Populus as a lignocellulosic feedstock for bioethanol. Biotechnol J 10:510–524

CAS  PubMed  Google Scholar 

Porth I, Klápště J, McKown AD, La Mantia J, Guy RD, Ingvarsson PK et al. (2015) Evolutionary quantitative genomics of Populus trichocarpa. PLoS ONE 10:e0142864

PubMed  PubMed Central  Google Scholar 

Porth I, Klápště J, McKown AD, La Mantia J, Hamelin RC, Skyba O et al. (2014) Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics. Plant Physiol 164:548–554

CAS  PubMed  Google Scholar 

Rohde A, Bastien C, Boerjan W (2011b) Temperature signals contribute to the timing of photoperiodic growth cessation and bud set in poplar. Tree Physiol 31:472–482

PubMed  Google Scholar 

Rohde A, Storme V, Jorge V, Gaudet M, Vitacolonna N, Fabbrini F et al. (2011a) Bud set in poplar – genetic dissection of a complex trait in natural and hybrid populations. N Phytologist 189:106–121

CAS  Google Scholar 

Sannigrahi P, Ragauskas AJ, Tuskan GA (2010) Poplar as a feedstock for biofuels: a review of compositional characteristics. Biofuels Bioprod Bioref 4:209–226

CAS  Google Scholar 

Singh RK, Svystun T, AlDahmash B, Jönsson AM, Bhalerao RP (2017) Photoperiod- and temperature-mediated control of phenology in trees—a molecular perspective. N Phytologist 213:511–524

CAS  Google Scholar 

Slavov GT, Leonardi S, Burczyk J, Adams WT, Strauss Sh, DiFazio SP (2009) Extensive pollen flow in two ecologically contrasting populations of Populus trichocarpa. Mol Ecol 18:357–373

Triozzi PM, Ramos-Sánchez JM, Hernández-Verdeja T, Moreno-Cortés A, Allona I, Perales M (2018) Photoperiodic regulation of shoot apical growth in poplar. Front Plant Sci 9:1030–1030

PubMed  PubMed Central  Google Scholar 

Vitasse Y, Delzon S, Dufrêne E, Pontailler J-Y, Louvet J-M, Kremer A et al. (2009) Leaf phenology sensitivity to temperature in European trees: Do within-species populations exhibit similar responses? Agric For Meteorol 149:735–744

Google Scholar 

Walsh B, Lynch M (2018) Evolution and selection of quantitative traits. Oxford University Press

Weih M (2004) Intensive short rotation forestry in boreal climates: present and future perspectives. Can J For Res 34:1369–1378

Google Scholar 

Wilson AJ, Kruuk LEB, Coltman DW (2005) Ontogenetic patterns in heritable variation for body size: using random regression models in a wild ungulate population. Am Naturalist 166:E177–E192

Google Scholar 

Yu Q, Tigerstedt PMA, Haapanen M (2001) Growth and phenology of hybrid aspen clones (Populus tremula L. x Populus tremuloides Michx.)

Zanewich KP, Pearce DW, Rood SB (2018) Heterosis in poplar involves phenotypic stability: cottonwood hybrids outperform their parental species at suboptimal temperatures. Tree Physiol 38:789–800

CAS  PubMed  Google Scholar 

Zhou L, Bawa R, Holliday JA (2014) Exome resequencing reveals signatures of demographic and adaptive processes across the genome and range of black cottonwood (Populus trichocarpa). Mol Ecol 23:2486–2499

CAS  PubMed  Google Scholar