Lomolino, M. V. Elevation gradients of species-density: historical and prospective views. Glob. Ecol. Biogeogr. 10, 3–13 (2001).
Google Scholar
McCain, C. M. Global analysis of reptile elevational diversity. Glob. Ecol. Biogeogr. 19, 541–553 (2010).
Quintero, I. & Jetz, W. Global elevational diversity and diversification of birds. Nature 555, 246–250 (2018).
Google Scholar
Orme, C. D. L. et al. Global hotspots of species richness are not congruent with endemism or threat. Nature 436, 1016–1019 (2005).
Google Scholar
Rahbek, C. et al. Humboldt’s enigma: what causes global patterns of mountain biodiversity? Science 365, 1108–1113 (2019).
Google Scholar
Wiens, J. J., Parra-Olea, G., García-París, M. & Wake, D. B. Phylogenetic history underlies elevational biodiversity patterns in tropical salamanders. Proc. R. Soc. B 274, 919–928 (2007).
Google Scholar
Pigot, A. L., Trisos, C. H. & Tobias, J. A. Functional traits reveal the expansion and packing of ecological niche space underlying an elevational diversity gradient in passerine birds. Proc. R. Soc. B 283, 20152013 (2016).
Google Scholar
Körner, C. & Spehn, E. M. (eds) Mountain Biodiversity: A Global Assessment (CRC Press, 2002).
Merckx, V. S. F. T. et al. Evolution of endemism on a young tropical mountain. Nature 524, 347–350 (2015).
Google Scholar
Fjeldsa, J. Geographical patterns for relict and young species of birds in Africa and South America and implications for conservation priorities. Biodivers. Conserv. 3, 207–226 (1994).
Google Scholar
Jetz, W., Rahbek, C. & Colwell, R. K. The coincidence of rarity and richness and the potential signature of history in centres of endemism. Ecol. Lett. 7, 1180–1191 (2004).
Google Scholar
Weir, J. T. Divergent timing and patterns of species accumulation in lowland and highland Neotropical birds. Evolution 60, 842–855 (2006).
Google Scholar
Hughes, C. & Eastwood, R. Island radiation on a continental scale: exceptional rates of plant diversification after uplift of the Andes. Proc. Natl Acad. Sci. USA 103, 10334–10339 (2006).
Google Scholar
Cozzarolo, C.-S. et al. Biogeography and ecological diversification of a mayfly clade in New Guinea.Front. Ecol. Evol. 7, 233 (2019).
Google Scholar
Davies, T. J., Savolainen, V., Chase, M. W., Moat, J. & Barracloug, T. G. Environmental energy and evolutionary rates in flowering plants. Proc. R. Soc. B 271, 2195–2200 (2004).
Google Scholar
Graves, G. R. Linearity of geographic range and its possible effect on the population structure of andean birds. Auk 105, 47–52 (1988).
Google Scholar
Janzen, D. H. Why mountain passes are higher in the tropics. Am. Nat. 101, 233–249 (1967).
Google Scholar
Cai, T. et al. What makes the Sino-Himalayan mountains the major diversity hotspots for pheasants? J. Biogeogr. 45, 640–651 (2018).
Google Scholar
Rana, S. K., Gross, K. & Price, T. D. Drivers of elevational richness peaks, evaluated for trees in the east Himalaya. Ecology 100, e02548 (2019).
Google Scholar
Rahbek, C. et al. Building mountain biodiversity: geological and evolutionary processes. Science 365, 1114–1119 (2019).
Google Scholar
Ribas, C. C., Moyle, R. G., Miyaki, C. Y. & Cracraft, J. The assembly of montane biotas: linking Andean tectonics and climatic oscillations to independent regimes of diversification in Pionus parrots. Proc. R. Soc. B 274, 2399–2408 (2007).
Google Scholar
Schwery, O. et al. As old as the mountains: the radiations of the Ericaceae. N. Phytologist 207, 355–367 (2015).
Google Scholar
Bates, J. M. & Zink, R. M. Evolution into the Andes: molecular evidence for species relationships in the genus Leptopogon. Auk 111, 507–515 (1994).
Roy, M. S. Recent diversification in African greenbuls (Pycnonotidae: Andropadus) supports a montane speciation model. Proc. R. Soc. B 264, 1337–1344 (1997).
Google Scholar
Garcia-Moreno, J. et al. Pre-Pleistocene differentiation among chat-tyrants. Condor 100, 629–640 (1998).
Google Scholar
Oliveros, C. H. et al. Earth history and the passerine superradiation. Proc. Natl Acad. Sci. USA 116, 7916–7925 (2019).
Google Scholar
Jetz, W., Thomas, G. H., Joy, J. B., Hartmann, K. & Mooers, A. O. The global diversity of birds in space and time. Nature 491, 444–448 (2012).
Google Scholar
Title, P. O. & Rabosky, D. L. Tip rates, phylogenies and diversification: what are we estimating, and how good are the estimates? Methods Ecol. Evol. 10, 821–834 (2019).
Google Scholar
Herrera-Alsina, L., van Els, P. & Etienne, R. S. Detecting the dependence of diversification on multiple traits from phylogenetic trees and trait data. Syst. Biol. 68, 317–328 (2019).
Google Scholar
Weir, J. T. & Schluter, D. The latitudinal gradient in recent speciation and extinction rates of birds and mammals. Science 315, 1574–1576 (2007).
Google Scholar
Derryberry, E. P. et al. Lineage diversification and morphological evolution in a large-scale continental radiation: the Neotropical ovenbirds and woodcreepers (Aves: Furnariidae). Evolution 65, 2973–2986 (2011).
Google Scholar
Fjeldså, J., Bowie, R. C. K. & Rahbek, C. The role of mountain ranges in the diversification of birds. Annu. Rev. Ecol. Evol. Syst. 43, 249–265 (2012).
Google Scholar
Chazot, N. et al. Into the Andes: multiple independent colonizations drive montane diversity in the Neotropical clearwing butterflies Godyridina. Mol. Ecol. 25, 5765–5784 (2016).
Google Scholar
Elias, M. et al. Out of the Andes: oatterns of diversification in clearwing butterflies. Mol. Ecol. 18, 1716–1729 (2009).
Google Scholar
McGuire, J. A., Witt, C. C., Altshuler, D. L. & Remsen, J. V. Phylogenetic systematics and biogeography of hummingbirds: Bayesian and maximum likelihood analyses of partitioned data and selection of an appropriate partitioning strategy. Syst. Biol. 56, 837–856 (2007).
Google Scholar
Brumfield, R. T. & Edwards, S. V. Evolution into and out of the Andes: a Bayesian analysis of historical diversification in Thamnophilus antshrikes. Evolution 61, 346–367 (2007).
Google Scholar
Zhou, C. et al. Genome-wide analysis sheds light on the high-altitude adaptation of the buff-throated partridge (Tetraophasis szechenyii). Mol. Genet. Genom. 295, 31–46 (2020).
Google Scholar
Xu, Z., He, J. & Wang, J. Hypoxia affects the resistance of Scylla paramamosain to Vibrio alginolyticus via changes of energy metabolism. Aquac. Rep. 19, 100565 (2021).
Google Scholar
Storz, J. F., Scott, G. R. & Cheviron, Z. A. Phenotypic plasticity and genetic adaptation to high-altitude hypoxia in vertebrates. J. Exp. Biol. 213, 4125–4136 (2010).
Google Scholar
Scott, G. R. Elevated performance: the unique physiology of birds that fly at high altitudes. J. Exp. Biol. 214, 2455–2462 (2011).
Google Scholar
Projecto-Garcia, J. et al. Repeated elevational transitions in hemoglobin function during the evolution of Andean hummingbirds. Proc. Natl Acad. Sci. USA 110, 20669–20674 (2013).
Google Scholar
Scott, G. R. et al. Molecular evolution of cytochrome C oxidase underlies high-altitude adaptation in the bar-headed goose. Mol. Biol. Evol. 28, 351–363 (2011).
Google Scholar
Schumm, M., White, A. E., Supriya, K. & Price, T. D. Ecological limits as the driver of bird species richness patterns along the east Himalayan elevational gradient. Am. Nat. 195, 802–817 (2020).
Google Scholar
Malpica, A., Covarrubias, S., Villegas-Patraca, R. & Herrera-Alsina, L. Ecomorphological structure of avian communities changes upon arrival of wintering species. Basic Appl. Ecol. 24, 60–67 (2017).
Google Scholar
Etienne, R. S. et al. A minimal model for the latitudinal diversity gradient suggests a dominant role for ecological limits. Am. Nat. 194, E122–E133 (2019).
Google Scholar
Freeman, B. G., Scholer, M. N., Ruiz-Gutierrez, V. & Fitzpatrick, J. W. Climate change causes upslope shifts and mountaintop extirpations in a tropical bird community. Proc. Natl Acad. Sci. USA 115, 11982–11987 (2018).
Google Scholar
Bouckaert, R. et al. BEAST 2: a software platform for Bayesian evolutionary analysis. PLoS Comput. Biol. 10, e1003537 (2014).
Google Scholar
Braun, E. L., Cracraft, J. & Houde, P. in Avian Genomics in Ecology and Evolution (ed. Kraus, R. H. S.) 151–210 (Springer, 2019).
del Hoyo, J., Elliott, A., Sargatal, J., Christie, D. A. & Kirwan, G. Handbook of the Birds of the World (Lynx Edicions, 2016).
Chapman, F. M. et al. The distribution of bird life in Ecuador: a contribution to a study of the origin of Andean bird-life. Bull. Am. Mus. Nat. Hist. 55, 1–784 (1926).
Maddison, W. P., Midford, P. E. & Otto, S. P. Estimating a binary character’s effect on speciation and extinction. Syst. Biol. 56, 701–710 (2007).
Google Scholar
Beaulieu, J. M. & O’Meara, B. C. Detecting hidden diversification shifts in models of trait-dependent speciation and extinction. Syst. Biol. 65, 583–601 (2016).
Google Scholar
Harmon, L. J., Weir, J. T., Brock, C. D., Glor, R. E. & Challenger, W. GEIGER: investigating evolutionary radiations. Bioinformatics 24, 129–131 (2008).
Google Scholar
Daru, B., Karunarathne, P. & Schliep, K. phyloregion: R package for biogeographic regionalization and spatial conservation. Methods Ecol. Evol. 11, 1483–1491 (2020).
Google Scholar
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