in

How the west was won: genetic reconstruction of rapid wolf recolonization into Germany’s anthropogenic landscapes

  • Åkesson M, Liberg O, Sand H, Wabakken P, Bensch S, Flagstad Ø (2016) Genetic rescue in a severely inbred wolf population. Mol Ecol 25:4745–4756

    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Andersen LW, Harms V, Caniglia R, Czarnomska SD, Fabbri E, Jędrzejewska B et al. (2015) Long-distance dispersal of a wolf, Canis lupus, in northwestern Europe. Mamm Res 60:163–168

    Article 

    Google Scholar 

  • Ansorge H, Kluth G, Hahne S (2006) Feeding ecology of wolves Canis lupus returning to Germany. Acta Theriol 51:99–106

    Article 

    Google Scholar 

  • Beugin M-P, Gayet T, Pontier D, Devillard S, Jombart T (2018) A fast likelihood solution to the genetic clustering problem. Methods Ecol Evol 9:1006–1016

    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Caniglia R, Fabbri E, Galaverni M, Milanesi P, Randi E (2014) Noninvasive sampling and genetic variability, pack structure, and dynamics in an expanding wolf population. J Mammal 95:41–59

    Article 

    Google Scholar 

  • Caniglia R, Fabbri E, Mastrogiuseppe L, Randi E (2013) Who is who? Identification of livestock predators using forensic genetic approaches. Forensic Sci Int Genet 7:397–404

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Carter NH, Linnell JDC (2016) Co-adaptation is key to coexisting with large carnivores. Trends Ecol Evol 31:575–578

    PubMed 
    Article 

    Google Scholar 

  • Chapron G, Kaczensky P, Linnell JDC, von Arx M, Huber D, Andrén H et al. (2014) Recovery of large carnivores in Europe’s modern human-dominated landscapes. Science 346:1517–1519

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Ciucci P, Reggioni W, Maiorano L, Boitani L (2009) Long-distance dispersal of a rescued wolf from the northern Apennines to the Western Alps. J Wildl Manag 73:1300–1306

    Article 

    Google Scholar 

  • Curran JM, Tvedebrink T (2013) DNAtools: tools for empirical testing of DNA match probabilities. R package

  • Czarnomska SD, Jędrzejewska B, Borowik T, Niedziałkowska M, Stronen AV, Nowak S et al. (2013) Concordant mitochondrial and microsatellite DNA structuring between Polish lowland and Carpathian Mountain wolves. Conserv Genet 14:573–588

    Article 

    Google Scholar 

  • DBBW (2017) Dokumentations- und Beratungsstelle des Bundes zum Thema Wolf. Wölfe in Deutschland—Statusbericht 2015/2016. p 1–28

  • Di Marco M, Boitani L, Mallon D, Hoffmann M, Iacucci A, Meijaard E et al. (2014) A retrospective evaluation of the global decline of carnivores and ungulates. Conserv Biol 28:1109–1118

    PubMed 
    Article 

    Google Scholar 

  • Dufresnes C, Miquel C, Remollino N, Biollaz F, Salamin N, Taberlet P et al. (2018) Howling from the past: historical phylogeography and diversity losses in European grey wolves. Proc R Soc B 285:20181148

    PubMed 
    Article 
    CAS 

    Google Scholar 

  • Excoffier L, Foll M, Petit RJ (2009) Genetic consequences of range expansions. Annu Rev Ecol Evol Syst 40:481–501

    Article 

    Google Scholar 

  • Fabbri E, Miquel C, Lucchini V, Santini A, Caniglia R, Duchamp C et al. (2007) From the Apennines to the Alps: colonization genetics of the naturally expanding Italian wolf (Canis lupus) population. Mol Ecol 16:1661–1671

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Francisco LV, Langston AA, Mellersh CS, Neal CL, Ostrander EA (1996) A class of highly polymorphic tetranucleotide repeats for canine genetic mapping. Mamm Genome 7:359–362

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Fredholm M, Winterø AK (1995) Variation of short tandem repeats within and between species belonging to the Canidae family. Mamm Genome 6:11–18

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Geffen E, Kam M, Hefner R, Hersteinsson P, Angerbjörn A, Dalèn L et al. (2011) Kin encounter rate and inbreeding avoidance in canids. Mol Ecol 20:5348–5358

    PubMed 
    Article 

    Google Scholar 

  • Gese ME, Mech LD (1991) Dispersal of wolves (Canis lupus) in northeastern Minnesota, 1969–1989. Can J Zool 69:2946–2955

    Article 

    Google Scholar 

  • Gorjanc G, Henderson DA (2007) GeneticsPed: pedigree and genetic relationship functions. R package version 1.40.0

  • Goudet J (2005) hierfstat, a package for r to compute and test hierarchical F-statistics. Mol Ecol Notes 5:184–186

    Article 

    Google Scholar 

  • Goudet J, Perrin N, Waser P (2002) Tests for sex-biased dispersal using bi-parentally inherited genetic markers. Mol Ecol 11:1103–1114

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Granroth-Wilding H, Primmer C, Lindqvist M, Poutanen J, Thalmann O, Aspi J et al. (2017) Non-invasive genetic monitoring involving citizen science enables reconstruction of current pack dynamics in a re-establishing wolf population. BMC Ecol 17:44

    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Harmoinen J, von Thaden A, Aspi J, Kvist L, Cocchiararo B, Jarausch A et al. (2020) Reliable wolf-dog hybrid detection in Europe using a reduced SNP panel developed for non-invasively collected samples, PREPRINT (Version 1). Research Square. https://doi.org/10.21203/rs.3.rs-113866/v1

  • Hausknecht R, Gula R, Pirga B, Kuehn R (2007) Urine— a source for noninvasive genetic monitoring in wildlife. Mol Ecol Notes 7:208–212

    CAS 
    Article 

    Google Scholar 

  • Hedrick PW, Peterson RO, Vucetich LM, Adams JR, Vucetich JA (2014) Genetic rescue in Isle Royale wolves: genetic analysis and the collapse of the population. Conserv Genet 15:1111–1121

    Article 

    Google Scholar 

  • Hijmans RJ, Williams E, Vennes C (2017) geosphere: spherical trigonometry. R package version 1:5–7

  • Hindrikson M, Remm J, Pilot M, Godinho R, Stronen AV, Baltrūnaité L et al. (2017) Wolf population genetics in Europe: a systematic review, meta-analysis and suggestions for conservation and management. Biol Rev Camb Philos Soc 92:1601–1629

    PubMed 
    Article 

    Google Scholar 

  • Hulva P, Černá Bolfíková B, Woznicová V, Jindřichová M, Benešová M, Mysłajek RW et al. (2018) Wolves at the crossroad: Fission-fusion range biogeography in the Western Carpathians and Central Europe. Divers Distrib 24:179–192

    Article 

    Google Scholar 

  • Jimenez MD, Bangs EE, Boyd DK, Smith DW, Becker SA, Ausband DE et al. (2017) Wolf dispersal in the Rocky Mountains, Western United States: 1993-2008. J Wildl Manag 81:581–592

    Article 

    Google Scholar 

  • Jombart T (2008) adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics 24:1403–1405

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Jones AG, Small CM, Paczolt KA, Ratterman NL (2010) A practical guide to methods of parentage analysis. Mol Ecol Resour 10:6–30

    PubMed 
    Article 

    Google Scholar 

  • Jones OR, Wang J (2010) COLONY: a program for parentage and sibship inference from multilocus genotype data. Mol Ecol Resour 10:551–555

    PubMed 
    Article 

    Google Scholar 

  • Kaczensky P, Kluth G, Knauer F, Rauer G, Reinhardt I, Wotschikowsky U (2009) Monitoring of large carnivores in Germany. BfN-Skripten 251:1–99

    Google Scholar 

  • Kalinowski ST, Taper ML, Marshall TC (2007) Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment. Mol Ecol 16:1099–1106

    Article 

    Google Scholar 

  • Kardos M, Åkesson M, Fountain T, Flagstad Ø, Liberg O, Olason P et al. (2018) Genomic consequences of intensive inbreeding in an isolated wolf population. Nat Ecol Evol 2:124–131

    PubMed 
    Article 

    Google Scholar 

  • Koch E, Schweizer RM, Schweizer TM, Stahler DR, Smith DW, Wayne RK et al. (2019) De novo mutation rate estimation in wolves of known pedigree. Mol Biol Evol 36:2536–2547

    CAS 
    PubMed Central 
    Article 
    PubMed 

    Google Scholar 

  • Kojola I, Aspi J, Hakala A, Heikkinen S, Ilmoni C, Ronkainen S (2006) Dispersal in an expanding wolf population in Finland. J Mammal 87:281–286

    Article 

    Google Scholar 

  • Kramer-Schadt S, Wenzler M, Gras P, Knauer F (2020) Habitatmodellierung und Abschätzung der potenziellen Anzahl von Wolfsterritorien in Deutschland. BfN-Skripten 556:1–30

    Google Scholar 

  • Lesniak I, Heckmann I, Heitlinger E, Szentiks CA, Nowak C, Harms V et al. (2017) Population expansion and individual age affect endoparasite richness and diversity in a recolonising large carnivore population. Sci Rep 7:41730

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Liberg O, Andrén H, Pedersen H-C, Sand H, Sejberg D, Wabakken P et al. (2005) Severe inbreeding depression in a wild wolf (Canis lupus) population. Biol Lett 1:17–20

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Libiseller C, Grimvall A (2002) Performance of partial Mann–Kendall tests for trend detection in the presence of covariates. Environmetrics 13:71–84

    CAS 
    Article 

    Google Scholar 

  • Mech LD, Boitani L (2003) Wolf social ecology. In: Mech LD, Boitani L (eds) Wolves: behavior, ecology, and conservation. University of Chicago Press, Chicago & London, p 1–34

  • Meuwissen THE, Luo Z (1992) Computing inbreeding coefficients in large populations. Genet Sel Evol 24:305–313

    PubMed Central 
    Article 
    PubMed 

    Google Scholar 

  • Neff MW, Broman KW, Mellersh CS, Ray K, Acland GM, Aguirre GD et al. (1999) A second-generation genetic linkage map of the domestic dog, Canis familiaris. Genetics 151:803–820

    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Nowak S, Mysłajek RW (2016) Wolf recovery and population dynamics in Western Poland, 2001–2012. Mamm Res 61:83–98

    Article 

    Google Scholar 

  • Parreira BR, Chikhi L (2015) On some genetic consequences of social structure, mating systems, dispersal, and sampling. Proc Natl Acad Sci U S A 112:E3318–E3326

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Resour 6:288–295

    Article 

    Google Scholar 

  • Peakall R, Smouse PE (2012) GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update. Bioinformatics 28:2537–2539

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Petit RJ (2011) Early insights into the genetic consequences of range expansions. Heredity 106:203–204

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Pilot M, Branicki W, Jędrzejewski W, Goszczyński J, Jędrzejewska B, Dykyy I et al. (2010) Phylogeographic history of grey wolves in Europe. BMC Evol Biol 10:104

    PubMed 
    PubMed Central 
    Article 
    CAS 

    Google Scholar 

  • Pohlert T (2018) trend: non-parametric trend tests and change-point detection. R package version 1.1.0

  • R Core Team (2017) R: a language and environment for statistical computing. Vienna, Austria

  • Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:248–249

    Article 

    Google Scholar 

  • Ražen N, Brugnoli A, Castagna C, Groff C, Kaczensky P, Kljun F et al. (2016) Long-distance dispersal connects Dinaric-Balkan and Alpine grey wolf (Canis lupus) populations. Eur J Wildl Res 62:137–142

    Article 

    Google Scholar 

  • Reinhardt I, Kaczensky P, Knauer F, Rauer G, Kluth G, Wölfl S et al. (2015) Monitoring von Wolf, Luchs und Bär in Deutschland. BfN-Skripten 413:1–96

    Google Scholar 

  • Reinhardt I, Kluth G (2007) Leben mit Wölfen. Leitfaden für den Umgang mit einer konfliktträchtigen Tierart in Deutschland. BfN-Skripten 201:1–180

    Google Scholar 

  • Reinhardt I, Kluth G, Blum C, Möslinger H, Harms V (2014) Wölfe in der Lausitz. Statusbericht für das Monitoringjahr 2013/2014. https://www.wolf.sachsen.de/download/Statusbericht_Sachsen_2013_2014.pdf. (Mar 2, 2020)

  • Reinhardt I, Kluth G, Nowak C, Szentiks CA, Krone O, Ansorge H et al. (2019) Military training areas facilitate the recolonization of wolves in Germany. Conserv Lett 10:e12635

    Google Scholar 

  • Ripple WJ, Estes JA, Beschta RL, Wilmers CC, Ritchie EG, Hebblewhite M et al. (2014) Status and ecological effects of the world’s largest carnivores. Science 343:1241484

    PubMed 
    Article 
    CAS 

    Google Scholar 

  • Robinson JA, Räikkönen J, Vucetich LM, Vucetich JA, Peterson RO, Lohmueller KE et al. (2019) Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction. Sci Adv 5:eaau0757

    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Robinson SP, Simmons LW, Kennington WJ (2013) Estimating relatedness and inbreeding using molecular markers and pedigrees: the effect of demographic history. Mol Ecol 22:5779–5792

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Rousset F (2008) Genepop’007: a complete reimplementation of the Genepop software for Windows and Linux. Mol Ecol Resour 8:103–106

    PubMed 
    Article 

    Google Scholar 

  • Schwarz G (1978) Estimating the dimension of a model. Ann Stat 6:461–464

    Article 

    Google Scholar 

  • Seddon JM (2005) Canid-specific primers for molecular sexing using tissue or non-invasive samples. Conserv Genet 6:147–149

    Article 

    Google Scholar 

  • Sen PK (1968) Estimates of the regression coefficient based on Kendall’s tau. J Am Stat Assoc 63:1379–1389

    Article 

    Google Scholar 

  • Shibuya H, Collins BK, Huang TH-M, Johnson GS (1994) A polymorphic (AGGAAT), tandem repeat in an intron of the canine von Willebrand factor gene. Anim Genet 25:122

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Smith D, Meier T, Geffen E, Mech LD, Burch JW, Adams LG et al. (1997) Is incest common in gray wolf packs? Behav Ecol 8:384–391

    Article 

    Google Scholar 

  • Sugg DW, Chesser RK, Dobson FS, Hoogland JL (1996) Population genetics meets behavioural ecology. Trends Ecol Evol 11:338–342

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Szewczyk M, Nowak S, Niedźwiecka N, Hulva P, Špinkytė-Bačkaitienė R, Demjanovičová K et al. (2019) Dynamic range expansion leads to establishment of a new, genetically distinct wolf population in Central Europe. Sci Rep 9:481

    Article 
    CAS 

    Google Scholar 

  • Szpiech ZA, Jakobsson M, Rosenberg NA (2008) ADZE: a rarefaction approach for counting alleles private to combinations of populations. Bioinformatics 24:2498–2504

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Tvedebrink T, Eriksen PS, Curran JM, Mogensen HS, Morling N (2012) Analysis of matches and partial-matches in a Danish STR data set. Forensic Sci Int Genet 6:387–392

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • van Eeden LM, Crowther MS, Dickman CR, Macdonald DW, Ripple WJ, Ritchie EG et al. (2018) Managing conflict between large carnivores and livestock. Conserv Biol 32:26–34

    PubMed 
    Article 

    Google Scholar 

  • van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538

    Article 
    CAS 

    Google Scholar 

  • vonHoldt BM, Stahler DR, Smith DW, Earl DA, Pollinger JP, Wayne RK (2008) The genealogy and genetic viability of reintroduced Yellowstone grey wolves. Mol Ecol 17:252–274

    PubMed 
    Article 

    Google Scholar 

  • Wabakken P, Sand H, Kojola I, Zimmermann B, Arnemo JMON, Pedersen HC et al. (2007) Multistage, long-range natal dispersal by a Global Positioning System-Collared Scandinavian Wolf. J Wildl Manag 71:1631–1634

    Article 

    Google Scholar 

  • Wabakken P, Sand H, Liberg O, Bjärvall A (2001) The recovery, distribution, and population dynamics of wolves on the Scandinavian peninsula, 1978-1998. Can J Zool 79:710–725

    Article 

    Google Scholar 

  • Waits LP, Luikart G, Taberlet P (2001) Estimating the probability of identity among genotypes in natural populations: cautions and guidelines. Mol Ecol 10:249–256

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Walling CA, Pemberton JM, Hadfield JD, Kruuk LEB (2010) Comparing parentage inference software: reanalysis of a red deer pedigree. Mol Ecol 19:1914–1928

    PubMed 
    Article 

    Google Scholar 

  • Watson JEM, Shanahan DF, Di Marco M, Allan J, Laurance WF, Sanderson EW et al. (2016) Catastrophic declines in wilderness areas undermine global environment targets. Curr Biol 26:2929–2934

    CAS 
    PubMed 
    Article 

    Google Scholar 


  • Source: Ecology - nature.com

    Mature Andean forests as globally important carbon sinks and future carbon refuges

    Negative emissions, positive economy