in

Oyster reef restoration facilitates the recovery of macroinvertebrate abundance, diversity, and composition in estuarine communities

  • Barbier, E. B. et al. The value of estuarine and coastal ecosystem services. Ecol. Monogr. 81, 169–193 (2011).

    Article 

    Google Scholar 

  • Lotze, H. K. Depletion, degradation, and recovery potential of estuaries and coastal seas. Science 312, 1806–1809 (2006).

    ADS 
    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Davis, J. & Kidd, I. M. Identifying major stressors: The essential precursor to restoring cultural ecosystem services in a degraded estuary. Estuar. Coast. 35, 1007–1017 (2012).

    Article 

    Google Scholar 

  • Copeland, B. Effects of decreased river flow on estuarine ecology. J. Water Pollut. Control Fed. 66, 1831–1839 (1966).

    Google Scholar 

  • Mcowen, C. J. et al. A global map of saltmarshes. Biodivers. Data J. https://doi.org/10.3897/BDJ.5.e11764 (2017).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Jackson, J. B. C. Historical overfishing and the recent collapse of coastal ecosystems. Science 293, 629–637 (2001).

    CAS 
    PubMed 
    Article 

    Google Scholar 

  • McAfee, D. & Connell, S. D. The global fall and rise of oyster reefs. Front. Ecol. Environ. 19, 118–125 (2021).

    Article 

    Google Scholar 

  • Powers, R. P. & Jetz, W. Global habitat loss and extinction risk of terrestrial vertebrates under future land-use-change scenarios. Nat. Clim. Chang. 9, 323–329 (2019).

    ADS 
    Article 

    Google Scholar 

  • Cardinale, B. J. et al. Biodiversity loss and its impact on humanity. Nature 486, 59–67 (2012).

    ADS 
    CAS 
    PubMed 
    Article 

    Google Scholar 

  • Hoekstra, J. M., Boucher, T. M., Ricketts, T. H. & Roberts, C. Confronting a biome crisis: Global disparities of habitat loss and protection. Ecol. Lett. 8, 23–29 (2005).

    Article 

    Google Scholar 

  • Goldewijk, K. K. Estimating global land use change over the past 300 years: The HYDE database. Glob. Biogeochem. 15, 417–433 (2001).

    ADS 
    Article 

    Google Scholar 

  • Munday, P. L. Habitat loss, resource specialization, and extinction on coral reefs. Glob. Chang. Biol. 10, 1642–1647 (2004).

    ADS 
    Article 

    Google Scholar 

  • Tilman, D., May, R. M., Lehman, C. L. & Nowak, M. A. Habitat destruction and the extinction debt. Nature 371, 65–66 (1994).

    ADS 
    Article 

    Google Scholar 

  • Elliott, M., Burdon, D., Hemingway, K. L. & Apitz, S. E. Estuarine, coastal and marine ecosystem restoration: Confusing management and science—A revision of concepts. Estuar. Coast. Shelf Sci. 74, 349–366 (2007).

    ADS 
    Article 

    Google Scholar 

  • Benayas, J. M. R., Newton, A. C., Diaz, A. & Bullock, J. M. Enhancement of biodiversity and ecosystem services by ecological restoration: A meta-analysis. Science 325, 1121–1124 (2009).

    ADS 
    CAS 
    Article 

    Google Scholar 

  • Hobbs, R. J. & Norton, D. A. Towards a conceptual framework for restoration ecology. Restor. Ecol. 4, 93–110 (1996).

    Article 

    Google Scholar 

  • Jones, C. G., Lawton, J. H. & Shachak, M. Organisms as Ecosystem Engineers in Ecosystem Management 130–147 (Springer, 1994).

  • Tolley, S. G. & Volety, A. K. The role of oysters in habitat use of oyster reefs by resident fishes and decapod crustaceans. J. Shellf. Res. 24, 1007–1012 (2005).

    Article 

    Google Scholar 

  • Carroll, J. M., Keller, D. A., Furman, B. T. & Stubler, A. D. Rough around the edges: Lessons learned and future directions in marine edge effects studies. Curr. Landsc. Ecol. Rep. 4, 91–102 (2019).

    Article 

    Google Scholar 

  • Harwell, H. D., Posey, M. H. & Alphin, T. D. Landscape aspects of oyster reefs: Effects of fragmentation on habitat utilization. J. Exp. Mar. Biol. Ecol. 409, 30–41 (2011).

    Article 

    Google Scholar 

  • Shervette, V. R. & Gelwick, F. Seasonal and spatial variations in fish and macroinvertebrate communities of oyster and adjacent habitats in a Mississippi estuary. Estuar. Coast. 31, 584–596 (2008).

    Article 

    Google Scholar 

  • Gain, I. E. et al. Macrofauna using intertidal oyster reef varies in relation to position within the estuarine habitat mosaic. Mar. Biol. 164, 1–16 (2017).

    MathSciNet 
    Article 

    Google Scholar 

  • Wong, M., Peterson, C. & Piehler, M. Evaluating estuarine habitats using secondary production as a proxy for food web support. Mar. Ecol. Prog. Ser. 440, 11–25 (2011).

    ADS 
    Article 

    Google Scholar 

  • Meyer, D. L. Habitat partitioning between the xanthid crabs Panopeus herbstii and Eurypanopeus depressus on intertidal oyster reefs (Crassostrea virginica) in southeastern North Carolina. Estuaries 17, 674–679 (1994).

    Article 

    Google Scholar 

  • McDonald, J. Divergent life history patterns in the co-occurring intertidal crabs Panopeus herbstii and Eurypanopeus depressus (Crustacea: Brachyura: Xanthidae). Mar. Ecol. Prog. Ser. 8, 173–180 (1982).

    ADS 
    Article 

    Google Scholar 

  • Grabowski, J. H. & Peterson, C. H. Restoring oyster reefs to recover ecosystem services in Theoretical Ecology Series vol. 4 281–298 (Elsevier, 2007).

  • Beck, M. W. et al. Oyster reefs at risk and recommendations for conservation, restoration, and management. Bioscience 61, 107–116 (2011).

    Article 

    Google Scholar 

  • Reeves, S. E. et al. Facilitating better outcomes: how positive species interactions can improve oyster reef restoration. Front. Mar. Sci. 7, 656 (2020).

    Article 

    Google Scholar 

  • Jud, Z. R. & Layman, C. A. Changes in motile benthic faunal community structure following large-scale oyster reef restoration in a subtropical estuary. Food Webs 25, e00177 (2020).

    Article 

    Google Scholar 

  • Pinnell, C. M., Ayala, G. S., Patten, M. V. & Boyer, K. E. Seagrass and oyster reef restoration in living shorelines: effects of habitat configuration on invertebrate community assembly. Diversity 13, 246 (2021).

    Article 

    Google Scholar 

  • La Peyre, M. K., Humphries, A. T., Casas, S. M. & La Peyre, J. F. Temporal variation in development of ecosystem services from oyster reef restoration. Ecol. Eng. 63, 34–44 (2014).

    Article 

    Google Scholar 

  • Geraldi, N. R., Powers, S. P., Heck, K. L. & Cebrian, J. Can habitat restoration be redundant? Response of mobile fishes and crustaceans to oyster reef restoration in marsh tidal creeks. Mar. Ecol. Prog. Ser. 389, 171–180 (2009).

    ADS 
    Article 

    Google Scholar 

  • Humphries, A. T. & La Peyre, M. K. Oyster reef restoration supports increased nekton biomass and potential commercial fishery value. PeerJ 3, e1111 (2015).

    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Ziegler, S. L., Grabowski, J. H., Baillie, C. J. & Fodrie, F. Effects of landscape setting on oyster reef structure and function largely persist more than a decade post-restoration. Restor. Ecol. 26, 933–942 (2018).

    Article 

    Google Scholar 

  • Rodriguez, A. B. et al. Oyster reefs can outpace sea-level rise. Nat. Clim. Change 4, 493–497 (2014).

    ADS 
    Article 

    Google Scholar 

  • Hanke, M. H., Posey, M. H. & Alphin, T. D. The influence of habitat characteristics on intertidal oyster Crassostrea virginica populations. Mar. Ecol. Prog. Ser. 571, 121–138 (2017).

    ADS 
    Article 

    Google Scholar 

  • Barber, A., Walters, L. & Birch, A. Potential for restoring biodiversity of macroflora and macrofauna on oyster reefs in Mosquito Lagoon, Florida. Fla. Sci. 66, 47–62 (2010).

    Google Scholar 

  • Boudreaux, M. L., Stiner, J. L. & Walters, L. J. Biodiversity of sessile and motile macrofauna on intertidal oyster reefs in Mosquito Lagoon, Florida. J. Shellf. Res. 25, 1079–1089 (2006).

    Article 

    Google Scholar 

  • Desmond, J. S., Deutschman, D. H. & Zedler, J. B. Spatial and temporal variation in estuarine fish and invertebrate assemblages: Analysis of an 11-year data set. Estuaries 25, 552–569 (2002).

    Article 

    Google Scholar 

  • Xu, Y., Xian, W. & Li, W. Spatial and temporal variations of invertebrate community in the Yangtze River Estuary and its adjacent waters. Biodivers. Sci. 22, 311 (2014).

    Article 

    Google Scholar 

  • Nichols, F. H. Abundance fluctuations among benthic invertebrates in two pacific estuaries. Estuaries 8, 136 (1985).

    Article 

    Google Scholar 

  • Van Horn, J. & Tolley, S. G. Patterns of distribution along a salinity gradient in the flatback mud crab Eurypanopeus depressus. Gulf Mex. Sci. 26, 66 (2008).

    Google Scholar 

  • Costlow, J. D., Bookhout, C. G. & Monroe, R. Salinity-temperature effects on the larval development of the crab, Panopeus herbstii Milne-Edwards, reared in the laboratory. Physiol. Zool. 35, 79–93 (1962).

    Article 

    Google Scholar 

  • Sulkin, S., Heukelem, W. & Kelly, P. Behavioral basis for depth regulation in the hatching and post larval stages of the mud crab Eurypanopeus depresus. Mar. Ecol. Prog. Ser. 11, 157–164 (1983).

    ADS 
    Article 

    Google Scholar 

  • Phlips, E. J., Badylak, S. & Grosskopf, T. Factors affecting the abundance of phytoplankton in a restricted subtropical lagoon, the Indian River Lagoon, Florida, USA. Estuar. Coast. Shelf. Sci. 55, 385–402 (2002).

    ADS 
    CAS 
    Article 

    Google Scholar 

  • Menendez, R. J. Vertical zonation of the xanthid mud crabs Panopeus obesus and Panopeus simpsoni on oyster reefs. Bull. Mar. Sci. 40, 73–77 (1987).

    Google Scholar 

  • Barshaw, D. E. & Lavalli, K. L. Predation upon postlarval lobsters Homarus americanus by cunners Tautogolabrus adspersus and mud crabs Neopanope sayi on three different substrates: Eelgrass, mud and rocks. Mar. Ecol. Prog. Ser. 48, 119–123 (1988).

    ADS 
    Article 

    Google Scholar 

  • Key, P. B., Wirth, E. F. & Fulton, M. H. A review of grass shrimp, Palaemonetes spp., as a bioindicator of anthropogenic impacts. Environ. Bioindic. 1, 115–128 (2006).

    CAS 
    Article 

    Google Scholar 

  • Kneib, R. T. & Weeks, C. A. Intertidal distribution and feeding habits of the mud crab, Eurytium limosum. Estuaries 13, 462 (1990).

    Article 

    Google Scholar 

  • Hsueh, P.-W., McClintock, J. B. & Hopkins, T. S. Comparative study of the diets of the blue crabs Callinectes similis and C. sapidus from a mud-bottom habitat in Mobile Bay, Alabama. J. Crust. Biol. 12, 615–619 (1992).

    Article 

    Google Scholar 

  • King, S. P. & Sheridan, P. Nekton of new seagrass habitats colonizing a subsided salt marsh in Galveston Bay, Texas. Estuar. Coast. 29, 286–296 (2006).

    Article 

    Google Scholar 

  • Zupo, V. & Nelson, W. Factors influencing the association patterns of Hippolyte zostericola and Palaemonetes intermedius (Decapoda: Natantia) with seagrasses of the Indian River Lagoon, Florida. Mar. Biol. 134, 181–190 (1999).

    Article 

    Google Scholar 

  • Weber, J. C. & Epifanio, C. E. Response of mud crab (Panopeus herbstii) megalopae to cues from adult habitat. Mar. Biol. 126, 655–661 (1996).

    Article 

    Google Scholar 

  • Harris, K. P. Oyster Reef Restoration: Impacts on Infaunal Communities in a Shallow Water Estuary. Honors Thesis. University of Central Florida (2018).

  • Shaffer, M., Donnelly, M. & Walters, L. Does intertidal oyster reef restoration affect avian community structure and behavior in a shallow estuarine system? A post-restoration analysis. Fla. Field Nat. 47, 37–59 (2019).

    Google Scholar 

  • Puckett, B. J. et al. Integrating larval dispersal, permitting, and logistical factors within a validated habitat suitability index for oyster restoration. Front. Mar. Sci. 5, 76 (2018).

    Article 

    Google Scholar 

  • Kim, C., Park, K. & Powers, S. P. Establishing restoration strategy of eastern oyster via a coupled biophysical transport model. Restor. Ecol. 21, 353–362 (2013).

    Article 

    Google Scholar 

  • Rodriguez-Perez, A., James, M. A. & Sanderson, W. G. A small step or a giant leap: Accounting for settlement delay and dispersal in restoration planning. PLoS ONE 16, e0256369 (2021).

    CAS 
    PubMed 
    PubMed Central 
    Article 

    Google Scholar 

  • Yeager, L. A. & Layman, C. A. Energy flow to two abundant consumers in a subtropical oyster reef food web. Aquat. Ecol. 45, 267–277 (2011).

    Article 

    Google Scholar 

  • Rodney, W. S. & Paynter, K. T. Comparisons of macrofaunal assemblages on restored and non-restored oyster reefs in mesohaline regions of Chesapeake Bay in Maryland. J. Exp. Mar. Biol. Ecol. 335, 39–51 (2006).

    Article 

    Google Scholar 

  • Macreadie, P. I., Geraldi, N. R. & Peterson, C. H. Preference for feeding at habitat edges declines among juvenile blue crabs as oyster reef patchiness increases and predation risk grows. Mar. Ecol. Prog. Ser. 466, 145–153 (2012).

    ADS 
    Article 

    Google Scholar 

  • Fodrie, F. J. et al. Measuring individuality in habitat use across complex landscapes: Approaches, constraints, and implications for assessing resource specialization. Oecologia 178, 75–87 (2015).

    ADS 
    PubMed 
    Article 

    Google Scholar 

  • Grabowski, J. H. et al. Regional environmental variation and local species interactions influence biogeographic structure on oyster reefs. Ecology 101, e02921 (2020).

    PubMed 
    Article 

    Google Scholar 

  • Peterson, C., Grabowski, J. & Powers, S. Estimated enhancement of fish production resulting from restoring oyster reef habitat: Quantitative valuation. Mar. Ecol. Prog. Ser. 264, 249–264 (2003).

    ADS 
    Article 

    Google Scholar 

  • Garvis, S. K., Sacks, P. E. & Walters, L. J. Formation, movement, and restoration of dead intertidal oyster reefs in Canaveral National Seashore and Mosquito Lagoon, Florida. J. Shellf. Res. 34, 251–258 (2015).

    Article 

    Google Scholar 

  • Gilmore, G. R. Environmental and biogeographic factors influencing ichthyofaunal diversity: Indian River Lagoon. Bull. Mar. Sci. 57, 153–170 (1995).

    Google Scholar 

  • Swain, H. M. Reconciling rarity and representation: A review of listed species in the Indian River Lagoon. Bull. Mar. Sci. 57, 252–266 (1995).

    ADS 

    Google Scholar 

  • Tremain, D. M. & Adams, D. H. Seasonal variations in species diversity, abundance, and composition of fish communities in the northern Indian River Lagoon, Florida. Bull. Mar. Sci. 57, 171–192 (1995).

    Google Scholar 

  • Paperno, R., Mille, K. & Kadison, E. Patterns in species composition of fish and selected invertebrate assemblages in estuarine subregions near Ponce de Leon Inlet, Florida. Estuar. Coast. Shelf. Sci. 52, 117–130 (2001).

    ADS 
    Article 

    Google Scholar 

  • Smithsonian Marine Station (SMS) at Fort Pierce. Indian River Lagoon Species Inventory https://naturalhistory2.si.edu/smsfp/irlspec/

  • Walters, L. J. et al. A negative association between recruitment of the eastern oyster Crassostrea virginica and the brown tide Aureoumbra lagunensis in Mosquito Lagoon, Florida. Fla. Sci. 84, 81–91 (2021).

    Google Scholar 

  • Walters, L. J., Sacks, P. E. & Campbell, D. E. Boating impacts and boat-wake resilient restoration of the eastern oyster Crassostrea virginica in Mosquito Lagoon, Florida, USA. Fla. Sci. 84, 173–199 (2021).

    Google Scholar 

  • Hanke, M. H., Posey, M. H. & Alphin, T. D. The effects of intertidal oyster reef habitat characteristics on faunal utilization. Mar. Ecol. Prog. Ser. 581, 57–70 (2017).

    ADS 
    Article 

    Google Scholar 

  • Crabtree, R. E. & Dean, J. M. The structure of two South Carolina estuarine tide pool fish assemblages. Estuaries 5, 2–9 (1982).

    Article 

    Google Scholar 

  • Baggett, L. P. et al. Guidelines for evaluating performance of oyster habitat restoration: Evaluating performance of oyster restoration. Restor. Ecol. 23, 737–745 (2015).

    Article 

    Google Scholar 

  • Chambers, L. G. et al. How well do restored intertidal oyster reefs support key biogeochemical properties in a coastal lagoon?. Estuar. Coast. 41, 784–799 (2018).

    Article 

    Google Scholar 

  • Shannon, C. & Wiener, W. The Mathematical Theory of Communication (Illinois Press, 1963).

    Google Scholar 

  • Nagendra, H. Opposite trends in response for the Shannon and Simpson indices of landscape diversity. Appl. Geogr. 22, 175–186 (2002).

    Article 

    Google Scholar 

  • Pinheiro, J., Bates, D., DebRoy, S., Sarkar, D., & R Core Team. nlme: Linear and Nonlinear Mixed Effects Models (2021).

  • Hulbert, J. Pseudoreplication and the design of field experiments in ecology. Ecol. Monogr. 54, 187–211 (1984).

    Article 

    Google Scholar 

  • Wang, Z. & Goonewardene, L. A. The use of MIXED models in the analysis of animal experiments with repeated measures data. Can. J. Anim. Sci. 84, 1–11 (2004).

    Article 

    Google Scholar 

  • Bates, D., Mächler, M., Bolker, B. & Walker, S. Fitting Mixed-Effects Models Using the lme4 Package in R (2008).

  • Lenth, R. V. emmeans: Estimated Marginal Means, aka Least-Squares Means (2021).

  • Clarke, K. R., Somerfield, P. J. & Chapman, M. G. On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray–Curtis coefficient for denuded assemblages. J. Exp. Mar. Biol. Ecol. 330, 55–80 (2006).

    Article 

    Google Scholar 

  • Bray, J. R. & Curtis, J. T. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monogr. 27, 325–349 (1957).

    Article 

    Google Scholar 

  • Anderson, M. J. & Willis, T. J. Canonical analysis of principal coordinates: A useful method of constrained ordination for ecology. Ecology 84, 511–525 (2003).

    Article 

    Google Scholar 

  • Clarke, K. R., Gorley, R., Somerfield, P. J. & Warwick, R. Change in Marine Communities: An Approach to Statistical Analysis and Interpretation (Primer-E Ltd, 2014).

  • Akaike, H. A new look at the statistical model identification. IEEE Trans. Autom. Control 19, 716–723 (1974).

    ADS 
    MathSciNet 
    MATH 
    Article 

    Google Scholar 

  • Venables, W. N. & Ripley, B. D. Modern Applied Statistics with S. (Springer, 2002).


  • Source: Ecology - nature.com

    Energy storage important to creating affordable, reliable, deeply decarbonized electricity systems

    Barcoding and species delimitation of Iranian freshwater crabs of the Potamidae family (Decapoda: Brachyura)