Ronce O. How does it feel to be like a rolling stone? Ten questions about dispersal evolution. Annu Rev Ecol Evol Syst. 2007;38:231–53.
Google Scholar
Shmida A, Wilson MV. Biological determinants of species diversity. J Biogeogr. 1985;12:1–20.
Google Scholar
Vellend M. Conceptual synthesis in community ecology. Q Rev Biol. 2010;85:183–206.
Google Scholar
Slatkin M. Gene flow and the geographic structure of natural populations. Science. 1987;236:787–92.
Google Scholar
Baas-Becking, LGM. Geobiology or introduction to environmental science (Translated from Dutch). The Hague: W.P. Van Stockum & Zoon; 1934.
Martiny JBH, Bohannan BJM, Brown JH, Colwell RK, Fuhrman JA, Green JL, et al. Microbial biogeography: putting microorganisms on the map. Nat Rev Microbiol. 2006;4:102–12.
Google Scholar
Peay KG, Schubert MG, Nguyen NH, Bruns TD. Measuring ectomycorrhizal fungal dispersal: macroecological patterns driven by microscopic propagules. Mol Ecol. 2012;21:4122–36.
Google Scholar
Andam CP, Doroghazi JR, Campbell AN, Kelly PJ, Choudoir MJ, Buckley DH. A latitudinal diversity gradient in terrestrial bacteria of the genus Streptomyces. mBio. 2016;7:e02200–15.
Google Scholar
Choudoir MJ, Barberán A, Menninger HL, Dunn RR, Fierer N. Variation in range size and dispersal capabilities of microbial taxa. Ecology. 2018;99:322–34.
Google Scholar
Hanson CA, Müller AL, Loy A, Dona C, Appel R, Jørgensen BB, et al. Historical factors associated with past environments influence the biogeography of thermophilic endospores in Arctic marine sediments. Front Microbiol. 2019;10:245.
Google Scholar
Albright MBN, Martiny JBH. Dispersal alters bacterial diversity and composition in a natural community. ISME J. 2018;12:296–9.
Google Scholar
Evans SE, Bell-Dereske LP, Dougherty KM, Kittredge HA. Dispersal alters soil microbial community response to drought. Environ Microbiol. 2020;22:905–16.
Google Scholar
Svoboda P, Lindström ES, Ahmed Osman O, Langenheder S. Dispersal timing determines the importance of priority effects in bacterial communities. ISME J. 2018;12:644–6.
Google Scholar
Cevallos-Cevallos JM, Danyluk MD, Gu G, Vallad GE, van Bruggen AHC. Dispersal of Salmonella typhimurium by rain splash onto tomato plants. J Food Prot. 2012;75:472–9.
Google Scholar
Lindström ES, Langenheder S. Local and regional factors influencing bacterial community assembly. Environ Microbiol Rep. 2012;4:1–9.
Google Scholar
Rime T, Hartmann M, Frey B. Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier. ISME J. 2016;10:1625–41.
Google Scholar
Lindström ES, Östman Ö. The importance of dispersal for bacterial community composition and functioning. PLoS ONE. 2011;6:e25883.
Google Scholar
Declerck SAJ, Winter C, Shurin JB, Suttle CA, Matthews B. Effects of patch connectivity and heterogeneity on metacommunity structure of planktonic bacteria and viruses. ISME J. 2013;7:533–42.
Google Scholar
Souffreau C, Pecceu B, Denis C, Rummens K, De Meester L. An experimental analysis of species sorting and mass effects in freshwater bacterioplankton. Freshw Biol. 2014;59:2081–95.
Google Scholar
Comte J, Langenheder S, Berga M, Lindström ES. Contribution of different dispersal sources to the metabolic response of lake bacterioplankton following a salinity change. Environ Microbiol. 2017;19:251–60.
Google Scholar
Albright MBN, Sevanto S, Gallegos-Graves LV, Dunbar J. Biotic interactions are more important than propagule pressure in microbial community invasions. mBio. 2020;11:e02089–20.
Google Scholar
Galès A, Latrille E, Wéry N, Steyer JP, Godon JJ. Needles of Pinus halepensis as biomonitors of bioaerosol emissions. PLoS ONE. 2014;9:e112182.
Google Scholar
Bell E, Blake LI, Sherry A, Head IM, Hubert CRJ. Distribution of thermophilic endospores in a temperate estuary indicate that dispersal history structures sediment microbial communities. Environ Microbiol. 2018;20:1134–47.
Google Scholar
Leung MHY, Wilkins D, Li EKT, Kong FKF, Lee PKH. Indoor-air microbiome in an urban subway network: diversity and dynamics. Appl Environ Microbiol. 2014;80:6760–70.
Google Scholar
Maignien L, DeForce EA, Chafee ME, Murat Eren A, Simmons SL. Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities. mBio. 2014;5:e00682–13.
Google Scholar
Bell T. Experimental tests of the bacterial distance-decay relationship. ISME J. 2010;4:1357–65.
Google Scholar
Kaneko R, Kaneko S. The effect of bagging branches on levels of endophytic fungal infection in Japanese beech leaves. For Pathol. 2004;34:65–78.
Google Scholar
Vannette RL, Fukami T. Dispersal enhances beta diversity in nectar microbes. Ecol Lett. 2017;20:901–10.
Google Scholar
Satou M, Kubota M, Nishi K. Measurement of horizontal and vertical movement of Ralstonia solanacearum in soil. J Phytopathol. 2006;154:592–7.
Google Scholar
Veen GF, Snoek BL, Bakx-Schotman T, Wardle DA, van der Putten WH. Relationships between fungal community composition in decomposing leaf litter and home-field advantage effects. Funct Ecol. 2019;33:1524–35.
Google Scholar
Liu G, Cornwell WK, Pan X, Ye D, Liu F, Huang Z, et al. Decomposition of 51 semidesert species from wide-ranging phylogeny is faster in standing and sand-buried than in surface leaf litters: implications for carbon and nutrient dynamics. Plant Soil. 2015;396:175–87.
Google Scholar
Kimball S, Goulden ML, Suding KN, Parker S. Altered water and nitrogen input shifts succession in a southern California coastal sage community. Ecol Appl. 2014;24:1390–404.
Google Scholar
Finks SS, Weihe C, Kimball S, Allison SD, Martiny AC, Treseder KK, et al. Microbial community response to a decade of simulated global changes depends on the plant community. Elementa. 2021;9:124.
Khalili B, Weihe C, Kimball S, Schmidt KT, Martiny JBH. Optimization of a method to quantify soil bacterial abundance by flow cytometry. mSphere. 2019;4:e00435–19.
Google Scholar
Lane DJ, Pace B, Olsen GJ, Stahl DA, Sogin ML, Pace NR. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc Natl Acad Sci USA. 1985;82:6955–9.
Google Scholar
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J. 2012;6:1621–4.
Google Scholar
Looby CI, Maltz MR, Treseder KK. Belowground responses to elevation in a changing cloud forest. Ecol Evol. 2016;6:1996–2009.
Google Scholar
Bolyen E, Rideout JR, Dillon MR, Bokulich NA, Abnet CC, Al-Ghalith GA, et al. Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol. 2019;37:852–7.
Google Scholar
Nilsson RH, Larsson KH, Taylor AFS, Bengtsson-Palme J, Jeppesen TS, Schigel D, et al. The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Res. 2019;47:D259–D264.
Google Scholar
Quast C, Pruesse E, Yilmaz P, Gerken J, Schweer T, Yarza P, et al. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 2013;41:D590–D596.
Google Scholar
Smith DJ, Ravichandar JD, Jain S, Griffin DW, Yu H, Tan Q, et al. Airborne bacteria in Earth’s lower stratosphere resemble taxa detected in the troposphere: results from a new NASA Aircraft Bioaerosol Collector (ABC). Front Microbiol. 2018;9:1752.
Google Scholar
Bryan NC, Christner BC, Guzik TG, Granger DJ, Stewart MF. Abundance and survival of microbial aerosols in the troposphere and stratosphere. ISME J. 2019;13:2789–99.
Google Scholar
Matulich KL, Weihe C, Allison SD, Amend AS, Berlemont R, Goulden ML, et al. Temporal variation overshadows the response of leaf litter microbial communities to simulated global change. ISME J. 2015;9:2477–89.
Google Scholar
Kim N, Zabaloy MC, Villamil MB, Riggins CW, Rodríguez-Zas S. Microbial shifts following five years of cover cropping and tillage practices in fertile agroecosystems. Microorganisms. 2020;8:1773.
Google Scholar
Gurfield N, Grewal S, Cua LS, Torres PJ, Kelley ST. Endosymbiont interference and microbial diversity of the Pacific coast tick, Dermacentor occidentalis, in San Diego County, California. PeerJ. 2017;5:e3202.
Google Scholar
Knights D, Kuczynski J, Charlson ES, Zaneveld J, Mozer MC, Collman RG, et al. Bayesian community-wide culture-independent microbial source tracking. Nat Methods. 2011;8:761–3.
Google Scholar
Bertolini V, Gandolfi I, Ambrosini R, Bestetti G, Innocente E, Rampazzo G, et al. Temporal variability and effect of environmental variables on airborne bacterial communities in an urban area of Northern Italy. Appl Microbiol Biotechnol. 2013;97:6561–70.
Google Scholar
Voříšková J, Baldrian P. Fungal community on decomposing leaf litter undergoes rapid successional changes. ISME J. 2013;7:477–86.
Google Scholar
Rastogi G, Coaker GL, Leveau JHJ. New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches. FEMS Microbiol Lett. 2013;348:1–10.
Google Scholar
Lindow SE, Leveau JHJ. Phyllosphere microbiology. Curr Opin Biotechnol. 2002;13:238–43.
Google Scholar
Purahong W, Wubet T, Lentendu G, Schloter M, Pecyna MJ, Kapturska D, et al. Life in leaf litter: novel insights into community dynamics of bacteria and fungi during litter decomposition. Mol Ecol. 2016;25:4059–74.
Google Scholar
Austin AT, Vivanco L. Plant litter decomposition in a semi-arid ecosystem controlled by photodegradation. Nature. 2006;442:555–8.
Google Scholar
Glassman SI, Weihe C, Li J, Albright MBN, Looby CI, Martiny AC, et al. Decomposition responses to climate depend on microbial community composition. Proc Natl Acad Sci USA. 2018;115:11994–9.
Google Scholar
Punnapayak H, Sudhadham M, Prasongsuk S, Pichayangkura S. Characterization of Aureobasidium pullulans isolated from airborne spores in Thailand. J Ind Microbiol Biotechnol. 2003;30:89–94.
Google Scholar
Elmassry MM, Ray N, Sorge S, Webster J, Merry K, Caserio A, et al. Investigating the culturable atmospheric fungal and bacterial microbiome in West Texas: implication of dust storms and origins of the air parcels. FEMS Microbes. 2020;1:xtaa009.
Google Scholar
Van Diepen LTA, Frey SD, Landis EA, Morrison EW, Pringle A. Fungi exposed to chronic nitrogen enrichment are less able to decay leaf litter. Ecology. 2017;98:5–11.
Google Scholar
Du X, Guo Q, Gao X, Ma K. Seed rain, soil seed bank, seed loss and regeneration of Castanopsis fargesii (Fagaceae) in a subtropical evergreen broad-leaved forest. Ecol Manag. 2007;238:212–9.
Google Scholar
Work TT, Buddle CM, Korinus LM, Spence JR. Pitfall trap size and capture of three taxa of litter-dwelling arthropods: implications for biodiversity studies. Environ Entomol. 2002;31:438–48.
Google Scholar
Leibold MA, Holyoak M, Mouquet N, Amarasekare P, Chase JM, Hoopes MF, et al. The metacommunity concept: a framework for multi-scale community ecology. Ecol Lett. 2004;7:601–13.
Google Scholar
Evans S, Martiny JBH, Allison SD. Effects of dispersal and selection on stochastic assembly in microbial communities. ISME J. 2017;11:176–85.
Google Scholar
Cadotte MW. Dispersal and species diversity: a meta-analysis. Am Nat. 2006;167:913–24.
Google Scholar
Schmidt SK, Nemergut DR, Darcy JL, Lynch R. Do bacterial and fungal communities assemble differently during primary succession? Mol Ecol. 2014;23:254–8.
Google Scholar
Baker NR, Khalili B, Martiny JBH, Allison SD. Microbial decomposers not constrained by climate history along a Mediterranean climate gradient in southern California. Ecology. 2018;99:1441–52.
Google Scholar
Martiny JBH, Martiny AC, Weihe C, Lu Y, Berlemont R, Brodie EL, et al. Microbial legacies alter decomposition in response to simulated global change. ISME J. 2017;11:490–9.
Google Scholar
Santander MV, Mitts BA, Pendergraft MA, Dinasquet J, Lee C, Moore AN, et al. Tandem fluorescence measurements of organic matter and bacteria released in sea spray aerosols. Environ Sci Technol. 2021;55:5171–9.
Google Scholar
Hobbie SE. Plant species effects on nutrient cycling: revisiting litter feedbacks. Trends Ecol Evol. 2015;30:357–63.
Google Scholar
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