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Biogeochemical and historical drivers of microbial community composition and structure in sediments from Mercer Subglacial Lake, West Antarctica

  • Siegert M, Ross N, Le Brocq A. Recent advances in understanding Antarctic subglacial lakes and hydrology. Philos Trans R Soc A-Math Phys Eng Sci. 2016;374:20140306.

    Google Scholar 

  • Fricker H, Scambos T, Bindschadler R, Padman L. An active subglacial water system in West Antarctica mapped from space. Science. 2007;315:1544–8.

    CAS 

    Google Scholar 

  • Livingstone S, Li Y, Rutishauser A, Sanderson R, Winter K, Mikucki J, et al. Subglacial lakes and their changing role in a warming climate. Nat Rev Earth Environ. 2022;3:106–24.

    Google Scholar 

  • Tulaczyk S, Mikucki J, Siegfried M, Priscu J, Barcheck C, Beem L, et al. WISSARD at Subglacial Lake Whillans, West Antarctica: scientific operations and initial observations. Ann Glaciol. 2014;55:51–8.

    Google Scholar 

  • Priscu J, Achberger A, Cahoon J, Christner B, Edwards R, Jones W, et al. A microbiologically clean strategy for access to the Whillans Ice Stream subglacial environment. Antarctitc Sci. 2013;25:637–47.

    Google Scholar 

  • Christner BC, Priscu JC, Achberger AM, Barbante C, Carter SP, Christianson K, et al. A microbial ecosystem beneath the West Antarctic ice sheet. Nature. 2014;512:310–3.

    CAS 

    Google Scholar 

  • Michaud A, Dore J, Achberger A, Christner B, Mitchell A, Skidmore M, et al. Microbial oxidation as a methane sink beneath the West Antarctic Ice Sheet. Nat Geosci. 2017;10:582–6.

    CAS 

    Google Scholar 

  • Achberger A, Christner B, Michaud A, Priscu J, Skidmore M, Vick-Majors T, et al. Microbial community structure of Subglacial Lake Whillans, West Antarctica. Front Microbiol. 2016;7:1457.

    Google Scholar 

  • Vick-Majors TJ, Mitchell AC, Achberger AM, Christner BC, Dore JE, Michaud AB, et al. Physiological ecology of microorganisms in Subglacial Lake Whillans. Front Microbiol. 2016;7:1705.

    Google Scholar 

  • Vick‐Majors TJ, Michaud AB, Skidmore ML, Turetta C, Barbante C, Christner BC, et al. Biogeochemical connectivity between freshwater ecosystems beneath the West Antarctic Ice Sheet and the Sub‐Ice Marine Environment. Global Biogeochem Cycles. 2020;34:1–17.

    Google Scholar 

  • Montross S, Skidmore M, Tranter M, Kivimaki A, Parkes R. A microbial driver of chemical weathering in glaciated systems. Geology. 2013;41:215–8.

    CAS 

    Google Scholar 

  • Gill-Olivas B, Telling J, Tranter M, Skidmore M, Christner B, O’Doherty S, et al. Subglacial erosion has the potential to sustain microbial processes in Subglacial Lake Whillans, Antarctica. Commun Earth Environ. 2021;2:1–12.

    Google Scholar 

  • Priscu JC, Kalin J, Winans J, Campbell T, Siegfried MR, Skidmore M, et al. Scientific access into Mercer Subglacial Lake: scientific objectives, drilling operations and initial observations. Ann Glaciol. 2021;62:340–52.

    Google Scholar 

  • Fricker H, Scambos T. Connected subglacial lake activity on lower Mercer and Whillans Ice Streams, West Antarctica, 2003-2008. J Glaciol. 2009;55:303–15.

    Google Scholar 

  • Carter S, Fricker H, Siegfried M. Evidence of rapid subglacial water piracy under Whillans Ice Stream, West Antarctica. J Glaciol. 2013;59:1147–62.

    Google Scholar 

  • Venturelli RA, Boehman B, Davis C, Hawkings JR, Johnston SE, Gustafson CD, et al. Constraints on the timing and extent of deglacial grounding line retreat in West Antarctica from subglacial sediments. AGU Advances. 2022; (in review).

  • Kingslake J, Scherer R, Albrecht T, Coenen J, Powell R, Reese R, et al. Extensive retreat and re-advance of the West Antarctic Ice Sheet during the Holocene. Nature. 2018;558:430–4.

    CAS 

    Google Scholar 

  • Venturelli RA, Siegfried MR, Roush KA, Li W, Burnett J, Zook R, et al. Mid-Holocene Grounding Line Retreat and Readvance at Whillans Ice Stream, West Antarctica. Geophys Res Lett. 2020;47:e2020GL088476.

    Google Scholar 

  • Scherer R, Aldahan A, Tulaczyk S, Possnert G, Engelhardt H, Kamb B. Pleistocene collapse of the West Antarctic ice sheet. Science. 1998;281:82–5.

    CAS 

    Google Scholar 

  • Achberger A. Structure and functional potential of microbial communities in Subglacial Lake Whillans and at the Ross Ice Shelf Grounding Zone, West Antarctica: Louisiana State University; 2016.

  • Blythe D, Duling D, Gibson D. Developing a hot-water drill system for the WISSARD project: 2. In situ water production. Ann Glaciol. 2014;55:298–310.

    Google Scholar 

  • Burnett J, Rack FR, Blythe D, Swanson P, Duling D, Gibson D, et al. Developing a hot-water drill system for the WISSARD project: 3. Instrumentation and control systems. Ann Glaciol. 2014;55:303–10.

    Google Scholar 

  • Rack F, Duling D, Blythe D, Burnett J, Gibson D, Roberts G, et al. Developing a hot-water drill system for the WISSARD project: 1. Basic drill system components and design. Ann Glaciol. 2014;55:285–97.

    Google Scholar 

  • Michaud A, Vick-Majors T, Achberger A, Skidmore M, Christner B, Tranter M, et al. Environmentally clean access to Antarctic subglacial aquatic environments. Antarctic Sci. 2020;32:1–12.

  • Kallmeyer J, Smith DC, Spivack AJ, D’Hondt S. New cell extraction procedure applied to deep subsurface sediments. Limnol Oceanogr Methods. 2008;6:236–45.

    Google Scholar 

  • Pan D, Morono Y, Inagaki F, Takai K. An improved method for extracting viruses from sediment: detection of far more viruses in the subseafloor than previously reported. Front Microbiol. 2019;10:878.

    Google Scholar 

  • Battin T, Wille A, Sattler B, Psenner R. Phylogenetic and functional heterogeneity of sediment biofilms along environmental gradients in a glacial stream. Appl Environ Microbiol. 2001;67:799–807.

    CAS 

    Google Scholar 

  • Klock J-H, Wieland A, Seifert R, Michaelis W. Extracellular polymeric substances (EPS) from cyanobacterial mats: characterisation and isolation method optimisation. Marine Biol. 2007;152:1077–85.

    CAS 

    Google Scholar 

  • Miyatake T, Moerdijk-Poortvliet T, Stal L, Boschker H. Tracing carbon flow from microphytobenthos to major bacterial groups in an intertidal marine sediment by using an in situ C-13 pulse-chase method. Limnol Oceanogr. 2014;59:1275–87.

    CAS 

    Google Scholar 

  • Albalasmeh A, Berhe A, Ghezzehei T. A new method for rapid determination of carbohydrate and total carbon concentrations using UV spectrophotometry. Carbohydrate Polymers. 2013;97:253–61.

    CAS 

    Google Scholar 

  • Lerotic M, Mak R, Wirick S, Meirer F, Jacobsen C. MANTiS: a program for the analysis of X-ray spectromicroscopy data. J Synchrotron Radiat. 2014;21:1206–12.

    CAS 

    Google Scholar 

  • Bonneville S, Delpomdor F, Preat A, Chevalier C, Araki T, Kazemian M, et al. Molecular identification of fungi microfossils in a Neoproterozoic shale rock. Sci Adv. 2020;6:eaax7599.

    CAS 

    Google Scholar 

  • Le Guillou C, Bernard S, De la Pena F, Le Brech Y. XANES-based quantification of carbon functional group concentrations. Anal Chem. 2018;90:8379–86.

    Google Scholar 

  • Solomon D, Lehmann J, Kinyangi J, Liang B, Heymann K, Dathe L, et al. Carbon (1s) NEXAFS spectroscopy of biogeochemically relevant reference organic compounds. Soil Sci Soc Am J. 2009;73:1817–30.

    CAS 

    Google Scholar 

  • Michaud A, Skidmore M, Mitchell A, Vick-Majors T, Barbante C, Turetta C, et al. Solute sources and geochemical processes in Subglacial Lake Whillans, West Antarctica. Geology. 2016;44:347–50.

    CAS 

    Google Scholar 

  • Raiswell R, Hawkings J, Eisenousy A, Death R, Tranter M, Wadham J. Iron in glacial systems: speciation, reactivity, freezing behavior, and alteration during transport. Front Earth Sci. 2018;6:222.

    Google Scholar 

  • Hyacinthe C, Bonneville S, Van Cappellen P. Reactive iron(III) in sediments: Chemical versus microbial extractions. Geochimica Et Cosmochimica Acta. 2006;70:4166–80.

    CAS 

    Google Scholar 

  • Raiswell R, Benning L, Tranter M, Tulaczyk S. Bioavailable iron in the Southern Ocean: the significance of the iceberg conveyor belt. Geochem Trans. 2008;9:7.

    Google Scholar 

  • Raiswell R, Vu H, Brinza L, Benning L. The determination of labile Fe in ferrihydrite by ascorbic acid extraction: Methodology, dissolution kinetics and loss of solubility with age and de-watering. Chem Geol. 2010;278:70–9.

    CAS 

    Google Scholar 

  • Fossing H, Jorgensen B. Measurement of bacterial sulfate reduction in sediments—evaluation of a single-step chromium reduction method. Biogeochemistry. 1989;8:205–22.

    CAS 

    Google Scholar 

  • Cline J. Spectrophotometric determination of hydrogen sulfide in natural waters. Limnol Oceanogr. 1969;14:454.

    CAS 

    Google Scholar 

  • Kallmeyer J, Ferdelman T, Weber A, Fossing H, Jorgensen B. A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements. Limnol Oceanogr Methods. 2004;2:171–80.

    Google Scholar 

  • Roy H, Weber H, Tarpgaard I, Ferdelman T, Jorgensen B. Determination of dissimilatory sulfate reduction rates in marine sediment via radioactive S-35 tracer. Limnol Oceanogr Methods. 2014;12:196–211.

    Google Scholar 

  • Caporaso J, Lauber C, Walters W, Berg-Lyons D, Huntley J, Fierer N, et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J. 2012;6:1621–4.

    CAS 

    Google Scholar 

  • Callahan BJ, McMurdie PJ, Rosen MJ, Han AW, Johnson AJ, Holmes SP. DADA2: high-resolution sample inference from Illumina amplicon data. Nat Methods. 2016;13:581–3.

    CAS 

    Google Scholar 

  • Button DK, Robertson BR. Determination of DNA content of aquatic bacteria by flow cytometry. Appl Environ Microbiol. 2001;67:1636–45.

    CAS 

    Google Scholar 

  • Michaud AB, Priscu JC, the Salsa Science Team. Sediment oxygen consumption in Antarctic subglacial environments. Limnology and Oceanography. 2022. (In Review).

  • Siegfried MR, Venturelli RA, Patterson MO, Arnuk W, Campbell TD, Gustafson CD, et al. The life and death of a subglacial lake in West Antarctica. Geology. 2023; in press; https://doi.org/10.1130/G50995.1.

  • Vyse S, Herzschuh U, Pfalz G, Pestryakova L, Diekmann B, Nowaczyk N, et al. Sediment and carbon accumulation in a glacial lake in Chukotka (Arctic Siberia) during the Late Pleistocene and Holocene: combining hydroacoustic profiling and down-core analyses. Biogeosciences. 2021;18:4791–816.

    CAS 

    Google Scholar 

  • Oliva-Urcia B, Moreno A, Leunda M, Valero-Garces B, Gonzalez-Samperiz P, Gil-Romera G, et al. Last deglaciation and Holocene environmental change at high altitude in the Pyrenees: the geochemical and paleomagnetic record from Marbor, Lake (N Spain). J Paleolimnol. 2018;59:349–71.

    Google Scholar 

  • Davis C. Ecology of subglacial lake microbial communities in West Antarctica: University of Florida; 2022.

  • Lanoil B, Skidmore M, Priscu JC, Han S, Foo W, Vogel SW, et al. Bacteria beneath the West Antarctic ice sheet. Environ Microbiol. 2009;11:609–15.

    CAS 

    Google Scholar 

  • Boyd E, Hamilton T, Havig J, Skidmore M, Shock E. Chemolithotrophic Primary Production in a Subglacial Ecosystem. Appl Environ Microbiol. 2014;80:6146–53.

    Google Scholar 

  • Sattley WM, Madigan MT. Isolation, characterization, and ecology of cold-active, chemolithotrophic, sulfur-oxidizing bacteria from perennially ice-covered Lake Fryxell, Antarctica. Appl Environ Microbiol. 2006;72:5562–8.

    CAS 

    Google Scholar 

  • Dieser M, Broemsen E, Cameron KA, King GM, Achberger A, Choquette K, et al. Molecular and biogeochemical evidence for methane cycling beneath the western margin of the Greenland Ice Sheet. ISME J. 2014;8:2305–16.

    CAS 

    Google Scholar 

  • Vaclavkova S, Schultz-Jensen N, Jacobsen O, Elberling B, Aamand J. Nitrate-controlled anaerobic oxidation of pyrite by thiobacillus cultures. Geomicrobiol J. 2015;32:412–9.

    CAS 

    Google Scholar 

  • Gustafson C, Key K, Siegfried M, Winberry J, Fricker H, Venturelli R, et al. A dynamic saline groundwater system mapped beneath an Antarctic ice stream. Science. 2022;376:640–4.

    CAS 

    Google Scholar 

  • Priscu JC, Tulaczyk S, Studinger M, Kennicutt M, Christner BC, Foreman CM. Antarctic subglacial water: origin, evolution and ecology. Polar lakes and rivers: limnology of Arctic and Antarctic aquatic ecosystems Oxford University Press, Oxford. 2008:119–35.

  • Whitman W, Coleman D, Wiebe W. Prokaryotes: the unseen majority. Proc Natl Acad Sci USA 1998;95:6578–83.

    CAS 

    Google Scholar 

  • Scherer R. Quaternary and tertiary microfossils from beneath Ice Stream-B—evidence for a dynamic West Antarctic ice-sheet history. Global Planet Change. 1991;90:395–412.

    Google Scholar 

  • Haran T, Bohlander J, Scambos T, Painter T, Fahnestock M. MODIS Mosaic of Antarctica 2008–2009 (MOA2009) Image Map, Version 2. 2021; Boulder, Colorado USA NASA National Snow and Ice Data Center Distributed Active Archive Center. https://doi.org/10.5067/4ZL43A4619AF.

  • Mouginot J, Rignot E, Scheuchl B. Continent‐Wide Interferometric SAR Phase Mapping of Antarctic Ice Velocity. Geophysical Research Letters. 2019;46:9710–8. https://doi.org/10.1029/2019GL083826.

  • Depoorter MA, Bamber JL, Griggs JA, Lenaerts JTM, Ligtenberg SRM, van den Broeke MR, et al. Calving fluxes and basal melt rates of Antarctic ice shelves. Nature. 2013;502:89–92. https://doi.org/10.1038/nature12567.


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