Pond C. Storage. In: Townsend C, Calow P, editors. Physiological ecology. Oxford: Blackwell Scientific; 1981. p. 190–219.
Chapin FS, Schulze E, Mooney HA. The ecology and economics of storage in plants. Annu Rev Ecol Syst. 1990;21:423–47.
Google Scholar
Moradali MF, Rehm BHA. Bacterial biopolymers: from pathogenesis to advanced materials. Nat Rev Microbiol. 2020;18:195–210.
Google Scholar
Varpe Ø. Life history adaptations to seasonality. Integr Comp Biol. 2017;57:943–60.
Google Scholar
Paul EA. Soil microbiology, ecology and biochemistry. 4th ed. Waltham, MA: Academic Press; 2015.
Becker KW, Collins JR, Durham BP, Groussman RD, White AE, Fredricks HF, et al. Daily changes in phytoplankton lipidomes reveal mechanisms of energy storage in the open ocean. Nat Commun. 2018;9:1–9.
Google Scholar
Rothermich MM, Guerrero R, Lenz RW, Goodwin S. Characterization, seasonal occurrence, and diel fluctuation of poly(hydroxyalkanoate) in photosynthetic microbial mats. Appl Environ Microbiol. 2000;66:13.
Google Scholar
Borzi A. Le comunicazioni intracellulari delle Nostochinee. Malpighia. 1887;1:28–74.
Sherman LA, Meunier P, Colón-López MS. Diurnal rhythms in metabolism: a day in the life of a unicellular, diazotrophic cyanobacterium. Photosynth Res. 1998;58:25–42.
Google Scholar
Stuart RK, Mayali X, Boaro AA, Zemla A, Everroad RC, Nilson D, et al. Light regimes shape utilization of extracellular organic C and N in a cyanobacterial biofilm. mBio. 2016;7:e00650–16.
Google Scholar
Allen MM. Cyanobacterial cell inclusions. Annu Rev Microbiol. 1984;38:1–25.
Google Scholar
Sanz-Luque E, Bhaya D, Grossman AR. Polyphosphate: a multifunctional metabolite in cyanobacteria and algae. Front Plant Sci. 2020;11:938.
Google Scholar
Martin P, Lauro FM, Sarkar A, Goodkin N, Prakash S, Vinayachandran PN. Particulate polyphosphate and alkaline phosphatase activity across a latitudinal transect in the tropical Indian Ocean: polyphosphate in the tropical Indian Ocean. Limnol Oceanogr. 2018;63:1395–406.
Google Scholar
Diaz J, Ingall E, Benitez-Nelson C, Paterson D, de Jonge MD, McNulty I, et al. Marine polyphosphate: a key player in geologic phosphorus sequestration. Science. 2008;320:652–5.
Google Scholar
Godwin CM, Cotner JB. Aquatic heterotrophic bacteria have highly flexible phosphorus content and biomass stoichiometry. ISME J. 2015;9:2324–7.
Google Scholar
Oehmen A, Lemos P, Carvalho G, Yuan Z, Keller J, Blackall L, et al. Advances in enhanced biological phosphorus removal: From micro to macro scale. Water Res. 2007;41:2271–300.
Google Scholar
Dorofeev AG, Nikolaev YuA, Mardanov AV, Pimenov NV. Role of phosphate-accumulating bacteria in biological phosphorus removal from wastewater. Appl Biochem Microbiol. 2020;56:1–14.
Google Scholar
Carrondo MA. Ferritins, iron uptake and storage from the bacterioferritin viewpoint. EMBO J. 2003;22:1959–68.
Google Scholar
Canessa P, Larrondo LF. Environmental responses and the control of iron homeostasis in fungal systems. Appl Microbiol Biotechnol. 2013;97:939–55.
Google Scholar
Harrison PM, Arosio P. The ferritins: molecular properties, iron storage function and cellular regulation. Biochim Biophys Acta. 1996;1275:161–203.
Google Scholar
Docampo R, Moreno SNJ. Acidocalcisomes. Cell Calcium. 2011;50:113–9.
Google Scholar
Tsednee M, Castruita M, Salomé PA, Sharma A, Lewis BE, Schmollinger SR, et al. Manganese co-localizes with calcium and phosphorus in Chlamydomonas acidocalcisomes and is mobilized in manganese-deficient conditions. J Biol Chem. 2019;294:17626–41.
Google Scholar
Mojzeš P, Gao L, Ismagulova T, Pilátová J, Moudříková Š, Gorelova O, et al. Guanine, a high-capacity and rapid-turnover nitrogen reserve in microalgal cells. Proc Natl Acad Sci USA. 2020;117:32722–30.
Turner BL. Inositol phosphates in soil: Amounts, forms and significance of the phosphorylated inositol stereoisomers. In: Turner BL, Richardson AE, Mullaney EJ, editors. Inositol phosphates: linking agriculture and the environment. 2007. Wallingford: CABI; 2007. p. 186–206.
Flemming H-C, Wingender J. The biofilm matrix. Nat Rev Microbiol. 2010;8:623–33.
Google Scholar
Otero A, Vincenzini M. Nostoc (Cyanophyceae) goes nude: Extracellular polysaccharides serve as a sink for reducing power under unbalanced C/N metabolism. J Phycol. 2004;40:74–81.
Google Scholar
Wang J, Yu H-Q. Biosynthesis of polyhydroxybutyrate (PHB) and extracellular polymeric substances (EPS) by Ralstonia eutropha ATCC 17699 in batch cultures. Appl Microbiol Biotechnol. 2007;75:871–8.
Google Scholar
Brangarí AC, Fernàndez-Garcia D, Sanchez-Vila X, Manzoni S. Ecological and soil hydraulic implications of microbial responses to stress—a modeling analysis. Adv Water Resour. 2018;116:178–94.
Google Scholar
Pal S, Manna A, Paul AK. Production of poly(β-hydroxybutyric acid) and exopolysaccharide by Azotobacter beijerinckii WDN-01. World J Microbiol Biotechnol. 1999;15:11–6.
Google Scholar
Kuzyakov Y, Blagodatskaya E. Microbial hotspots and hot moments in soil: Concept & review. Soil Biol Biochem. 2015;83:184–99.
Google Scholar
Hauschild P, Röttig A, Madkour MH, Al-Ansari AM, Almakishah NH, Steinbüchel A. Lipid accumulation in prokaryotic microorganisms from arid habitats. Appl Microbiol Biotechnol. 2017;101:2203–16.
Google Scholar
Wang JG, Bakken LR. Screening of soil bacteria for poly-β-hydroxybutyric acid production and its role in the survival of starvation. Micro Ecol. 1998;35:94–101.
Google Scholar
Hanzlíková A, Jandera A, Kunc F. Poly-3-hydroxybutyrate production and changes of bacterial community in the soil. Folia Microbiologica. 1985;30:58–64.
Google Scholar
Iwahara S, Miki S. Production of α-α-trehalose by a bacterium isolated from soil. Agric Biol Chem. 1988;52:867–8.
Google Scholar
Treseder KK, Lennon JT. Fungal traits that drive ecosystem dynamics on land. Microbiol Mol Biol Rev. 2015;79:243–62.
Google Scholar
López MF, Männer P, Willmann A, Hampp R, Nehls U. Increased trehalose biosynthesis in Hartig net hyphae of ectomycorrhizas. N Phytol. 2007;174:389–98.
Google Scholar
Bünemann EK, Smernik RJ, Doolette AL, Marschner P, Stonor R, Wakelin SA, et al. Forms of phosphorus in bacteria and fungi isolated from two Australian soils. Soil Biol Biochem. 2008;40:1908–15.
Google Scholar
Genet P, Prevost A, Pargney JC. Seasonal variations of symbiotic ultrastructure and relationships of two natural ectomycorrhizae of beech (Fagus sylvatica/Lactarius blennius var. viridis and Fagus sylvatica/Lactarius subdulcis). Trees. 2000;14:465–74.
Google Scholar
Frey B, Brunner I, Walther P, Scheidegger C, Zierold K. Element localization in ultrathin cryosections of high-pressure frozen ectomycorrhizal spruce roots. Plant Cell Environ. 1997;20:929–37.
Google Scholar
Hanzlíkova A, Jandera A, Kunc F. Formation of poly-3-hydroxybutyrate by a soil microbial community during batch and heterocontinuous cultivation. Folia Microbiol. 1984;29:233–41.
Google Scholar
Mason-Jones K, Banfield CC, Dippold MA. Compound‐specific 13C stable isotope probing confirms synthesis of polyhydroxybutyrate by soil bacteria. Rapid Commun Mass Spectrom. 2019;33:795–802.
Google Scholar
Hedlund K. Soil microbial community structure in relation to vegetation management on former agricultural land. Soil Biol Biochem. 2002;34:1299–307.
Google Scholar
White PM, Potter TL, Strickland TC. Pressurized liquid extraction of soil microbial phospholipid and neutral lipid fatty acids. J Agric Food Chem. 2009;57:7171–7.
Google Scholar
Xu X, Thornton PE, Post WM. A global analysis of soil microbial biomass carbon, nitrogen and phosphorus in terrestrial ecosystems: Global soil microbial biomass C, N and P. Glob Ecol Biogeogr. 2013;22:737–49.
Google Scholar
Bååth E. The use of neutral lipid fatty acids to indicate the physiological conditions of soil fungi. Micro Ecol. 2003;45:373–83.
Google Scholar
Soliman AH, Radwan SS. Degradation of sterols, triacylglycerol, and phospholipids by soil microorganisms. Zbl Bakt II Abt. 1981;136:420–6.
Google Scholar
Diakhaté S, Gueye M, Chevallier T, Diallo NH, Assigbetse K, Abadie J, et al. Soil microbial functional capacity and diversity in a millet-shrub intercropping system of semi-arid Senegal. J Arid Environ. 2016;129:71–9.
Google Scholar
Bölscher T, Wadsö L, Börjesson G, Herrmann AM. Differences in substrate use efficiency: impacts of microbial community composition, land use management, and substrate complexity. Biol Fertil Soils. 2016;52:547–59.
Google Scholar
Mason-Jones K, Schmücker N, Kuzyakov Y. Contrasting effects of organic and mineral nitrogen challenge the N-Mining Hypothesis for soil organic matter priming. Soil Biol Biochem. 2018;124:38–46.
Google Scholar
Muhammadi S, Afzal M, Hameed S. Bacterial polyhydroxyalkanoates-eco-friendly next generation plastic: Production, biocompatibility, biodegradation, physical properties and applications. Green Chem Lett Rev. 2015;8:56–77.
Google Scholar
Jose NA, Lau R, Swenson TL, Klitgord N, Garcia-Pichel F, Bowen BP, et al. Flux balance modeling to predict bacterial survival during pulsed-activity events. Biogeosciences. 2018;15:2219–29.
Google Scholar
Medeiros PM, Fernandes MF, Dick RP, Simoneit BRT. Seasonal variations in sugar contents and microbial community in a ryegrass soil. Chemosphere. 2006;65:832–9.
Google Scholar
Žifčáková L, Větrovský T, Lombard V, Henrissat B, Howe A, Baldrian P. Feed in summer, rest in winter: microbial carbon utilization in forest topsoil. Microbiome 2017;5:1–12.
Google Scholar
Ratcliff WC, Denison RF. Individual-level bet hedging in the bacterium Sinorhizobium meliloti. Curr Biol. 2010;20:1740–4.
Google Scholar
Schoch CL, Ciufo S, Domrachev M, Hotton CL, Kannan S, Khovanskaya R, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database. 2020;2020:baaa062.
Google Scholar
Choi J, Kim S-H. A genome tree of life for the fungi kingdom. Proc Natl Acad Sci USA. 2017;114:9391–6.
Google Scholar
Jun S-R, Sims GE, Wu GA, Kim S-H. Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution. Proc Natl Acad Sci USA. 2010;107:133–8.
Google Scholar
Elbahloul Y, Krehenbrink M, Reichelt R, Steinbuchel A. Physiological conditions conducive to high cyanophycin content in biomass of Acinetobacter calcoaceticus strain ADP1. Appl Environ Microbiol. 2005;71:858–66.
Google Scholar
Lillie SH, Pringle JR. Reserve carbohydrate metabolism in Saccharomyces cerevisiae: responses to nutrient limitation. J Bacteriol. 1980;143:1384–94.
Google Scholar
Hall KD, Guo J. Obesity energetics: Body weight regulation and the effects of diet composition. Gastroenterology. 2017;152:1718–27.e3.
Google Scholar
Sala A, Woodruff DR, Meinzer FC. Carbon dynamics in trees: feast or famine? Tree Physiol. 2012;32:764–75.
Google Scholar
Varpe Ø, Ejsmond MJ. Trade-offs between storage and survival affect diapause timing in capital breeders. Evol Ecol. 2018;32:623–41.
Google Scholar
Heilmeier H, Freund M, Steinlein T, Schulze E-D, Monson RK. The influence of nitrogen availability on carbon and nitrogen storage in the biennial Cirsium vulgare (Savi) Ten. I. Storage capacity in relation to resource acquisition, allocation and recycling. Plant Cell Environ. 1994;17:1125–31.
Google Scholar
Pond CM. Ecology of storage. In: Levin SA, editor. Encyclopedia of biodiversity, 2nd ed. Amsterdam: Academic Press; 2013. p. 23–38.
McCue MD. Starvation physiology: reviewing the different strategies animals use to survive a common challenge. Comp Biochem Physiol A Mol Integr Physiol. 2010;156:1–18.
Google Scholar
Donald J, Pannabecker TL. Osmoregulation in desert-adapted mammals. In: Hyndman KA, Pannabecker TL, editors. Sodium and water homeostasis. New York: Springer New York; 2015. p. 191–211.
Röttig A, Hauschild P, Madkour MH, Al-Ansari AM, Almakishah NH, Steinbüchel A. Analysis and optimization of triacylglycerol synthesis in novel oleaginous Rhodococcus and Streptomyces strains isolated from desert soil. J Biotechnol. 2016;225:48–56.
Google Scholar
Bailey AP, Koster G, Guillermier C, Hirst EMA, MacRae JI, Lechene CP, et al. Antioxidant role for lipid droplets in a stem cell niche of Drosophila. Cell. 2015;163:340–53.
Google Scholar
Jenni-Eiermann S, Jenni L. Fasting in birds: general patterns and the special case of endurance flight. In: McCue MD, editor. Comparative physiology of fasting, starvation, and food limitation. 2012. Berlin: Springer; 2012. p. 171–92.
Fischer B, Dieckmann U, Taborsky B. When to store energy in a stochastic environment. Evolution. 2011;65:1221–32.
Google Scholar
Bonnet X, Bradshaw D, Shine R. Capital versus income breeding: An ectothermic perspective. Oikos. 1998;83:333.
Google Scholar
de Mazancourt C, Schwartz MW. Starve a competitor: evolution of luxury consumption as a competitive strategy. Theor Ecol. 2012;13:37–49.
Google Scholar
Ejsmond MJ, Varpe Ø, Czarnoleski M, Kozłowski J. Seasonality in offspring value and trade-offs with growth explain capital breeding. Am Nat. 2015;186:E111–25.
Google Scholar
Kourmentza C, Plácido J, Venetsaneas N, Burniol-Figols A, Varrone C, Gavala HN, et al. Recent advances and challenges towards sustainable polyhydroxyalkanoate (PHA) production. Bioengineering. 2017;4:55.
Google Scholar
Wilson WA, Roach PJ, Montero M, Baroja-Fernández E, Muñoz FJ, Eydallin G, et al. Regulation of glycogen metabolism in yeast and bacteria. FEMS Microbiol Rev. 2010;34:952–85.
Google Scholar
Doi Y, Kawaguchi Y, Koyama N, Nakamura S, Hiramitsu M, Yoshida Y, et al. Synthesis and degradation of polyhydroxyalkanoates in Alcaligenes eutrophus. FEMS Microbiol Lett. 1992;103:103–8.
Google Scholar
Alvarez AHM, Kalscheuer R, Steinbüchel A. Accumulation of storage lipids in species of Rhodococcus and Nocardia and effect of inhibitors and polyethylene glycol. Lipid. 1997;99:239–46.
Google Scholar
Parrou JL, Enjalbert B, Plourde L, Bauche A, Gonzalez B, François J. Dynamic responses of reserve carbohydrate metabolism under carbon and nitrogen limitations in Saccharomyces cerevisiae. Yeast. 1999;15:191–203.
Google Scholar
Gebremariam SY, Beutel MW, Christian D, Hess TF. Research advances and challenges in the microbiology of enhanced biological phosphorus removal-A critical review. Water Environ Res. 2011;83:195–219.
Google Scholar
Ratledge C. Fatty acid biosynthesis in microorganisms being used for single cell oil production. Biochimie. 2004;86:807–15.
Google Scholar
Matin A, Veldhuis C, Stegeman V, Veenhuis M. Selective advantage of a Spirillum sp. in a carbon-limited environment. Accumulation of poly-β-hydroxybutyric acid and its role in starvation. J Gen Microbiol. 1979;112:349–55.
Google Scholar
Poblete-Castro I, Escapa IF, Jäger C, Puchalka J, Chi Lam C, Schomburg D, et al. The metabolic response of P. putida KT2442 producing high levels of polyhydroxyalkanoate under single- and multiple-nutrient-limited growth: Highlights from a multi-level omics approach. Micro Cell Fact. 2012;11:34.
Google Scholar
Wilkinson JF, Munro ALS. The influence of growth limiting conditions on the synthesis of possible carbon and energy storage polymers in Bacillus megaterium. In: Powell EO, Evans CGT, Strange RE, Tempest DW, editors. Microbial physiology and continuous culture, Proceedings of the Third International Symposium. Salisbury, United Kingdom: Her Majesty’s Stationery Office; 1967. p. 173–85.
Alvarez HM, Mayer F, Fabritius D, Steinbüchel A. Formation of intracytoplasmic lipid inclusions by Rhodococcus opacus strain PD630. Arch Microbiol. 1996;165:377–86.
Google Scholar
Orchard ED, Benitez-Nelson CR, Pellechia PJ, Lomas MW, Dyhrman ST. Polyphosphate in Trichodesmium from the low-phosphorus Sargasso Sea. Limnol Oceanogr. 2010;55:2161–9.
Google Scholar
Li J, Mara P, Schubotz F, Sylvan JB, Burgaud G, Klein F, et al. Recycling and metabolic flexibility dictate life in the lower oceanic crust. Nature. 2020;579:250–5.
Google Scholar
Preiss J, Romeo T. Molecular biology and regulatory aspects of glycogen biosynthesis in bacteria. Prog Nucleic Acid Res Mol Biol. 1994;47:299–329.
Google Scholar
Mackerras AH, de Chazal NM, Smith GD. Transient accumulations of cyanophycin in Anabaena cylindrica and Synechocystis 6308. J Gen Microbiol. 1990;136:2057–65.
Google Scholar
Parnas H, Cohen D. The optimal strategy for the metabolism of reserve materials in micro-organisms. J Theor Biol. 1976;56:19–55.
Google Scholar
Dijkstra P, Salpas E, Fairbanks D, Miller EB, Hagerty SB, van Groenigen KJ, et al. High carbon use efficiency in soil microbial communities is related to balanced growth, not storage compound synthesis. Soil Biol Biochem. 2015;89:35–43.
Google Scholar
Empadinhas N, da Costa MS. Osmoadaptation mechanisms in prokaryotes: distribution of compatible solutes. Int Microbiol. 2008;11:151–61.
Google Scholar
Albi T, Serrano A. Inorganic polyphosphate in the microbial world. Emerging roles for a multifaceted biopolymer. World J Microbiol Biotechnol. 2016;32:27.
Google Scholar
Sekar K, Linker SM, Nguyen J, Grünhagen A, Stocker R, Sauer U. Bacterial glycogen provides short-term benefits in changing environments. Appl Environ Microbiol. 2020;86:e00049–20.
Google Scholar
Silljé HH, Paalman JW, ter Schure EG, Olsthoorn SQ, Verkleij AJ, Boonstra J, et al. Function of trehalose and glycogen in cell cycle progression and cell viability in Saccharomyces cerevisiae. J Bacteriol. 1999;181:396–400.
Google Scholar
Jahid IK, Silva AJ, Benitez JA. Polyphosphate stores enhance the ability of Vibrio cholerae to overcome environmental stresses in a low-phosphate environment. Appl Environ Microbiol. 2006;72:7043–9.
Google Scholar
Ramírez-Trujillo JA, Dunn MF, Suárez-Rodríguez R, Hernández-Lucas I. The Sinorhizobium meliloti glyoxylate cycle enzyme isocitrate lyase (AceA) is required for the utilization of poly-β-hydroxybutyrate during carbon starvation. Ann Microbiol. 2016;66:921–4.
Google Scholar
Vagabov VM, Trilisenko LV, Kulaev IS. Dependence of inorganic polyphosphate chain length on the orthophosphate content in the culture medium of the yeast Saccharomyces cerevisiae. Biochemistry. 2000;65:6.
Schimz K-L, Irrgang K, Overhoff B. Glycogen, a cytoplasmic reserve polysaccharide of Cellulomonas sp. (DSM20108): Its identification, carbon source-dependent accumulation, and degradation during starvation. FEMS Microbiol Lett. 1985;30:165–9.
Google Scholar
Kalscheuer R, Stöveken T, Malkus U, Reichelt R, Golyshin PN, Sabirova JS, et al. Analysis of storage lipid accumulation in Alcanivorax borkumensis: Evidence for alternative triacylglycerol biosynthesis routes in bacteria. J Bacteriol. 2007;189:918–28.
Google Scholar
Busuioc M, Mackiewicz K, Buttaro BA, Piggot PJ. Role of intracellular polysaccharide in persistence of Streptococcus mutans. J Bacteriol. 2009;191:7315–22.
Google Scholar
Ruiz JA, Lopez NI, Fernandez RO, Mendez BS. Polyhydroxyalkanoate degradation Is associated with nucleotide accumulation and enhances stress resistance and survival of Pseudomonas oleovorans in natural water microcosms. Appl Environ Microbiol. 2001;67:225–30.
Google Scholar
Klotz A, Georg J, Bučinská L, Watanabe S, Reimann V, Januszewski W, et al. Awakening of a dormant cyanobacterium from nitrogen chlorosis reveals a genetically determined program. Curr Biol. 2016;26:2862–72.
Google Scholar
Elbein AD. New insights on trehalose: a multifunctional molecule. Glycobiology. 2003;13:17R–27R.
Google Scholar
Obruca S, Sedlacek P, Koller M. The underexplored role of diverse stress factors in microbial biopolymer synthesis. Bioresour Technol. 2021;326:124767.
Google Scholar
Ayub ND, Tribelli PM, López NI. Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation. Extremophiles. 2009;13:59–66.
Google Scholar
Grime JP. Evidence for the existence of three primary strategies in plants and its relevance to ecological and evolutionary theory. Am Nat. 1977;111:1169–94.
Google Scholar
Ho A, Kerckhof F-M, Luke C, Reim A, Krause S, Boon N, et al. Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies: Functional traits of methane-oxidizing bacteria. Environ Microbiol Rep. 2013;5:335–45.
Google Scholar
Santillan E, Seshan H, Constancias F, Wuertz S. Trait‐based life‐history strategies explain succession scenario for complex bacterial communities under varying disturbance. Environ Microbiol. 2019;21:3751–64.
Google Scholar
Chesson P. Mechanisms of maintenance of species diversity. Annu Rev Ecol Syst. 2000;31:343–66.
Google Scholar
Loreau M, de Mazancourt C. Biodiversity and ecosystem stability: a synthesis of underlying mechanisms. Ecol Lett. 2013;16:106–15.
Google Scholar
Geyer KM, Kyker-Snowman E, Grandy AS, Frey SD. Microbial carbon use efficiency: accounting for population, community, and ecosystem-scale controls over the fate of metabolized organic matter. Biogeochemistry. 2016;127:173–88.
Google Scholar
Manzoni S, Porporato A. Soil carbon and nitrogen mineralization: Theory and models across scales. Soil Biol Biochem. 2009;41:1355–79.
Google Scholar
Schultz P, Urban NR. Effects of bacterial dynamics on organic matter decomposition and nutrient release from sediments: a modeling study. Ecol Model. 2008;210:1–14.
Google Scholar
Torres-Dorante LO, Claassen N, Steingrobe B, Olfs H-W. Polyphosphate determination in calcium acetate-lactate (CAL) extracts by an indirect colorimetric method. J Plant Nutr Soil Sci. 2004;167:701–3.
Google Scholar
Micić V, Köster J, Kruge MA, Engelen B, Hofmann T. Bacterial wax esters in recent fluvial sediments. Org Geochem. 2015;89–90:44–55.
Google Scholar
Mooshammer M, Wanek W, Zechmeister-Boltenstern S, Richter A. Stoichiometric imbalances between terrestrial decomposer communities and their resources: mechanisms and implications of microbial adaptations to their resources. Front Microbiol 2014;5:1–10.
Google Scholar
Op De Beeck M, Troein C, Siregar S, Gentile L, Abbondanza G, Peterson C, et al. Regulation of fungal decomposition at single-cell level. ISME J. 2020;14:896–905.
Google Scholar
Liang C, Amelung W, Lehmann J, Kästner M. Quantitative assessment of microbial necromass contribution to soil organic matter. Glob Chang Biol. 2019;25:3578–90.
Google Scholar
Ducklow H, Steinberg D, Buesseler K. Upper ocean carbon export and the biological pump. Oceanography. 2001;14:50–8.
Google Scholar
Wieder WR, Allison SD, Davidson EA, Georgiou K, Hararuk O, He Y, et al. Explicitly representing soil microbial processes in Earth system models: Soil microbes in Earth system models. Glob Biogeochem Cycles. 2015;29:1782–800.
Google Scholar
Schimel J, Weintraub MN. The implications of exoenzyme activity on microbial carbon and nitrogen limitation in soil: a theoretical model. Soil Biol Biochem. 2003;35:549–63.
Google Scholar
Ni B-J, Fang F, Rittmann BE, Yu H-Q. Modeling microbial products in activated sludge under feast-famine conditions. Environ Sci Technol. 2009;43:2489–97.
Google Scholar
Godwin CM, Cotner JB. Stoichiometric flexibility in diverse aquatic heterotrophic bacteria is coupled to differences in cellular phosphorus quotas. Front Microbiol 2015;6:1–15.
Google Scholar
Camenzind T, Philipp Grenz K, Lehmann J, Rillig MC. Soil fungal mycelia have unexpectedly flexible stoichiometric C:N and C:P ratios. Ecol Lett. 2021;24:208–18.
Google Scholar
Fatichi S, Manzoni S, Or D, Paschalis A. A mechanistic model of microbially mediated soil biogeochemical processes: a reality check. Glob Biogeochem Cycles. 2019;33:620–48.
Google Scholar
Sistla SA, Rastetter EB, Schimel JP. Responses of a tundra system to warming using SCAMPS: a stoichiometrically coupled, acclimating microbe–plant–soil model. Ecol Monogr. 2014;84:151–70.
Google Scholar
Lashermes G, Gainvors-Claisse A, Recous S, Bertrand I. Enzymatic strategies and carbon use efficiency of a litter-decomposing fungus grown on maize leaves, stems, and roots. Front Microbiol 2016;7:1–14.
Google Scholar
Lee ZM, Schmidt TM. Bacterial growth efficiency varies in soils under different land management practices. Soil Biol Biochem. 2014;69:282–90.
Google Scholar
Camenzind T, Lehmann A, Ahland J, Rumpel S, Rillig MC. Trait‐based approaches reveal fungal adaptations to nutrient‐limiting conditions. Environ Microbiol. 2020;22:3548–60.
Google Scholar
Manzoni S, Čapek P, Mooshammer M, Lindahl BD, Richter A, Šantrůčková H. Optimal metabolic regulation along resource stoichiometry gradients. Ecol Lett. 2017;20:1182–91.
Google Scholar
Tang J, Riley WJ. Weaker soil carbon–climate feedbacks resulting from microbial and abiotic interactions. Nat Clim Chang. 2015;5:5.
Google Scholar
Lee KS, Pereira FC, Palatinszky M, Behrendt L, Alcolombri U, Berry D, et al. Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions. Nat Protoc. 2021;16:634–76.
Google Scholar
Günther S, Trutnau M, Kleinsteuber S, Hause G, Bley T, Röske I, et al. Dynamics of polyphosphate-accumulating bacteria in wastewater treatment plant microbial communities detected via DAPI (4′,6′-diamidino-2-phenylindole) and tetracycline labeling. Appl Environ Microbiol. 2009;75:2111–21.
Google Scholar
Singleton CM, Petriglieri F, Kristensen JM, Kirkegaard RH, Michaelsen TY, Andersen MH, et al. Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing. Nat Commun. 2021;12:2009.
Google Scholar
Link H, Fuhrer T, Gerosa L, Zamboni N, Sauer U. Real-time metabolome profiling of the metabolic switch between starvation and growth. Nat Methods. 2015;12:1091–7.
Google Scholar
Warren CR. Altitudinal transects reveal large differences in intact lipid composition among soils. Soil Res. 2021;59:644–59.
Google Scholar
Wilkinson J. The problem of energy-storage compounds in bacteria. Exp Cell Res. 1959;7:111–30.
Google Scholar
Nickels JS, King JD, White DC. Poly-β-hydroxybutyrate accumulation as a measure of unbalanced growth of the estuarine detrital microbiota. Appl Environ Microbiol. 1979;37:459–65.
Google Scholar
Murphy DJ. The dynamic roles of intracellular lipid droplets: from archaea to mammals. Protoplasma. 2012;249:541–85.
Google Scholar
Alvarez HM. Triacylglycerol and wax ester-accumulating machinery in prokaryotes. Biochimie. 2016;120:28–39.
Google Scholar
Koller M, Maršálek L, de Sousa Dias MM, Braunegg G. Producing microbial polyhydroxyalkanoate (PHA) biopolyesters in a sustainable manner. N Biotechnol. 2017;37:24–38.
Google Scholar
Obruca S, Sedlacek P, Slaninova E, Fritz I, Daffert C, Meixner K, et al. Novel unexpected functions of PHA granules. Appl Microbiol Biotechnol. 2020;104:4795–810.
Google Scholar
Roach PJ, Depaoli-Roach AA, Hurley TD, Tagliabracci VS. Glycogen and its metabolism: some new developments and old themes. Biochem J. 2012;441:763–87.
Google Scholar
Wang L, Wang M, Wise MJ, Liu Q, Yang T, Zhu Z, et al. Recent progress in the structure of glycogen serving as a durable energy reserve in bacteria. World J Microbiol Biotechnol. 2020;36:14.
Google Scholar
Ruhal R, Kataria R, Choudhury B. Trends in bacterial trehalose metabolism and significant nodes of metabolic pathway in the direction of trehalose accumulation: Trehalose metabolism in bacteria. Micro Biotechnol. 2013;6:493–502.
Google Scholar
Kalscheuer R. Genetics of wax ester and triacylglycerol biosynthesis in bacteria. In: Timmis KN, editor. Handbook of hydrocarbon and lipid microbiology. Berlin, Heidelberg: Springer Berlin Heidelberg; 2010. p. 527–35.
Rao NN, Gómez-García MR, Kornberg A. Inorganic polyphosphate: essential for growth and survival. Annu Rev Biochem. 2009;78:605–47.
Google Scholar
Denoncourt A, Downey M. Model systems for studying polyphosphate biology: a focus on microorganisms. Curr Genet. 2021;67:331–46.
Google Scholar
Füser G, Steinbüchel A. Analysis of genome sequences for genes of cyanophycin metabolism: Identifying putative cyanophycin metabolizing prokaryotes. Macromol Biosci. 2007;7:278–96.
Google Scholar
Watzer B, Forchhammer K. Cyanophycin: a nitrogen-rich reserve polymer. In: Tiwari A, editor. Cyanobacteria. London: InTech; 2018.
Source: Ecology - nature.com
