in

Historical reconstruction of the population dynamics of southern right whales in the southwestern Atlantic Ocean

  • Hutchinson, G. E. An Introduction to Population Ecology (Yale University, 1978).

    MATH 

    Google Scholar 

  • Erb, J., Boyce, M. S. & Stenseth, N. C. Population dynamics of large and small mammals. Oikos 92, 3–12 (2001).

    Google Scholar 

  • Gaillard, J. M., Festa-Bianchet, M. & Yoccoz, N. G. Population dynamics of large herbivores: Variable recruitment with constant adult survival. Trends Ecol. Evol. 13, 58–63 (1998).

    CAS 
    PubMed 

    Google Scholar 

  • Dennis, B., Ponciano, J. M., Lele, S. R., Taper, M. L. & Staples, D. F. Estimating density dependence, process noise, and observation error. Ecol. Monogr. 76, 323–341 (2006).

    Google Scholar 

  • Rockwood, L. L. Introduction to Population Ecology (Wiley, 2015).

    Google Scholar 

  • Caughley, G. Directions in conservation biology. J. Anim. Ecol. 63, 215–244 (1994).

    Google Scholar 

  • Hoffmann, M. et al. The impact of conservation on the status of the world’s vertebrates. Science 330, 1503–1509 (2010).

    ADS 
    CAS 
    PubMed 

    Google Scholar 

  • Ripple, W. J. et al. Collapse of the world’s largest herbivores. Sci. Adv. 1, e1400103 (2015).

    ADS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Dickinson, A. B. A History of Sealing in the Falkland Island and Dependencies, 1764–1972. Doctoral dissertation, Scott Polar Research Institute, University of Cambridge. (1987).

  • Clapham, P. J. & Baker, C. S. Whaling, modern. In Encyclopedia of Marine Mammals (eds Perrin, W. F. et al.) 1070–1074 (Academic Press, 2018).

    Google Scholar 

  • Reeves, R. R. The origins and character of ‘aboriginal subsistence’ whaling: a global review. Mamm. Rev. 32, 71–106 (2002).

    Google Scholar 

  • Reeves, R. R. Hunting of marine mammals. In Encyclopedia of Marine Mammals (eds Perrin, W. F. et al.) 585–588 (Academic Press, 2009).

    Google Scholar 

  • Magera, A. M., Flemming, J. E. M., Kaschner, K., Christensen, L. B. & Lotze, H. K. Recovery trends in marine mammal populations. PLoS One 8, e77908 (2013).

    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Tulloch, V. J., Plagányi, É. E., Matear, R., Brown, C. J. & Richardson, A. J. Ecosystem modelling to quantify the impact of historical whaling on Southern Hemisphere baleen whales. Fish Fish. 19, 117–137 (2017).

    Google Scholar 

  • Best, P. B. Increase rates in severely depleted stocks of baleen whales. ICES J. Mar. Sci. 50, 169–186 (1993).

    Google Scholar 

  • Townsend, C. H. The distribution of certain whales as shown by logbook records of American whaleships. Zool. Sci. Contr. New York Zool. Soc. 19, 1–50 (1935).

    MathSciNet 

    Google Scholar 

  • Du Pasquier, J. T. Les baleiniers français au XIXe siècle, 1814–1868 (Terre et mer, 1982).

  • Richards, R. Into the South Seas: The Southern Whale Fishery Comes of Age on the Brazil Banks 1765 to 1812 (The Paramatta Press, 1993).

    Google Scholar 

  • International Whaling Commission. Report of the workshop on the comprehensive assessment of right whales: A worldwide comparison. J. Cetacean Res. Manag. (Special Issue) 2, 1–60 (2001).

    Google Scholar 

  • Jackson, J., Patenaude, N., Carroll, E. & Baker, C. S. How few whales were there after whaling? Inference from contemporary mtDNA diversity. Mol. Ecol. 17, 236–251 (2008).

    CAS 
    PubMed 

    Google Scholar 

  • Tormosov, D. D. et al. Soviet catches of southern right whales Eubalaena australis, 1951–1971. Biological data and conservation implications. Biol. Conserv. 86, 185–197 (1998).

    Google Scholar 

  • International Whaling Commission. Report of the IWC workshop on the assessment of Southern Right whales. J. Cetacean Res. Manag. (Supp) 14, 439–462 (2013).

    Google Scholar 

  • Carroll, E. L. et al. Accounting for female reproductive cycles in a superpopulation capture–recapture framework. Ecol. Appl. 23, 1677–1690 (2013).

    CAS 
    PubMed 

    Google Scholar 

  • Brandão, A., Vermeulen, E., Ross-Gillespie, A., Findlay, K. & Butterworth, D. Updated application of a photo-identification based assessment model to southern right whales in South African waters, focussing on inferences to be drawn from a series of appreciably lower counts of calving females over 2015 to 2017. IWC SC/67b/SH/22 (2018).

  • Bannister, J. L. Project A7- Monitoring Population Dynamics of ‘Western’ Right Whales off Southern Australia 2015–2018. Final report to National Environment Science Program, Australian Commonwealth Government. (2017).

  • Stamation, K., Watson, M., Moloney, P., Charlton, C. & Bannister, J. L. Population estimate and rate of increase of Southern Right whales Eubalaena australis in Southeastern Australia. Endanger. Species Res. 41, 373–383 (2020).

    Google Scholar 

  • Baker, C. S., Patenaude, N. J., Bannister, J. L., Robins, J. & Kato, H. Distribution and diversity of mtDNA lineages among southern right whales (Eubalaena australis) from Australia and New Zealand. Mar. Biol. 134, 1–7 (1999).

    CAS 

    Google Scholar 

  • Patenaude, N. J. et al. Mitochondrial DNA diversity and population structure among southern right whales (Eubalaena australis). J. Hered. 98, 147–157 (2007).

    CAS 
    PubMed 

    Google Scholar 

  • Carroll, E. L. et al. Population structure and individual movement of southern right whales around New Zealand and Australia. Mar. Ecol. Prog. Ser. 432, 257–268 (2011).

    ADS 
    CAS 

    Google Scholar 

  • Cooke, J. G., Rowntree, V. J. & Payne, R. Estimates of demographic parameters for southern right whales (Eubalaena australis) observed off Península Valdés, Argentina. J. Cetacean Res. Manag. (Special Issue) 2, 125–132 (2001).

    Google Scholar 

  • Cooke, J., Rowntree, V. & Sironi, M. Southwest Atlantic right whales: interim updated population assessment from photo-id collected at Península Valdéz, Argentina. IWC SC/66a/BRG/23 (2015).

  • Crespo, E. A. et al. The southwestern Atlantic southern right whale, Eubalaena australis, population is growing but at a decelerated rate. Mar. Mamm. Sci. 35, 93–107 (2019).

    Google Scholar 

  • Groch, K. R., Palazzo, J. T. Jr., Flores, P. A. C., Adler, F. R. & Fabian, M. E. Recent rapid increases in the right whale (Eubalaena australis) population off southern Brazil. LAJAM 4, 41–47 (2005).

    Google Scholar 

  • Danilewicz, D., Moreno, I. B., Tavares, M. & Sucunza, F. Southern right whales (Eubalaena australis) off Torres, Brazil: group characteristics, movements, and insights into the role of the Brazilian-Uruguayan wintering ground. Mammalia 81, 225–234 (2017).

    Google Scholar 

  • Costa, P., Praderi, R., Piedra, M. & Franco-Fraguas, P. Sightings of southern right whales, Eubalaena australis, off Uruguay. LAJAM 4, 157–161 (2005).

    Google Scholar 

  • Lodi, L. & Tardelli, R. M. Southern right whale on the coast of Rio de Janeiro State, Brazil: Conflict between conservation and human activity. J. Mar. Biol. Ass. UK 87, 105–107 (2007).

    Google Scholar 

  • Belgrano, J., Iñíguez, M., Gibbons, J., García, C. & Olavarría, C. South-west Atlantic right whales Eubalaena australis (Desmoulins, 1822) distribution nearby the Magellan Strait. Anales Instituto Patagonia (Chile) 36, 69–74 (2008).

    Google Scholar 

  • Belgrano, J., Kröhling, F., Arcucci, D., Melcón, M. & Iñíguez, M. First Southern right whale aerial surveys in Golfo San Jorge, Santa Cruz, Argentina. IWC SC/63/BRG11 (2011).

  • Arias, M. et al. Southern right whale Eubalaena australis in Golfo San Matías (Patagonia, Argentina): Evidence of recolonisation. PloS One 13(12), e0207524 (2018).

    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Mandiola, M. A. et al. Half a century of sightings data of southern right whales in Mar del Plata (Buenos Aires, Argentina). J. Mar. Biol. Ass. UK 100, 165–171 (2020).

    Google Scholar 

  • Weir, C. R. & Stanworth, A. The Falkland Islands (Malvinas) as sub-Antarctic foraging, migratory and wintering habitat for southern right whales. J. Mar. Biol. Ass. UK 100, 153–163 (2020).

    Google Scholar 

  • Du Pasquier, T. Catch history of French right whaling mainly in the South Atlantic. Right whales: Past and present status. Rep. Int. Whaling Commission (Special Issue) 10, 269–274 (1986).

    Google Scholar 

  • Best, P. B. Estimates of the landed catch of right (and other whalebone) whales in the American fishery, 1805–1909. Fish. Bull. 85, 403–418 (1987).

    Google Scholar 

  • Rowntree, V., Groch, K. R., Vilches, F. & Sironi, M. Sighting Histories of 124 Southern Right Whales Recorded off Both Southern Brazil and Península Valdés, Argentina, between 1971 and 2017. IWC SC/68B/CMP/20 (2020).

  • Zerbini, A. N., et al. Satellite tracking of Southern right whales (Eubalaena australis) from Golfo San Matias, Rio Negro Province, Argentina. IWC SC/67b/CMP/17 (2018).

  • Rowntree, V. J., Valenzuela, L. O., Fraguas, P. F. & Seger, J. Foraging behaviour of Southern Right Whales (Eubalaena australis) inferred from variation of carbon stable isotope ratios in their baleen. IWC SC/60/BRG23 (2008).

  • Vighi, M. A. et al. Stable isotopes indicate population structuring in the Southwest Atlantic population of right whales (Eubalaena australis). PLoS One 9, e90489 (2014).

    ADS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Valenzuela, L. O., Rowntree, V. J., Sironi, M. & Seger, J. Stable isotopes (d15N, d13C, d34S) in skin reveal diverse food sources used by southern right whales Eubalaena australis. Mar. Ecol. Prog. Ser. 603, 243–255 (2018).

    ADS 
    CAS 

    Google Scholar 

  • Ott, P. H., Flores, P. A. C., Freitas, T. R. O. & White, B. N. Genetic diversity and population structure of southern right whales, Eubalaena australis, from the Atlantic coast of South America. IWC SC/S11/RW25 (2011).

  • Carroll, E. L. et al. Genetic diversity and connectivity of southern right whales (Eubalaena australis) found in the Brazil and Chile-Peru wintering grounds and the South Georgia (Islas Georgias del Sur) feeding ground. J. Hered. 111, 263–276 (2020).

    PubMed 
    PubMed Central 

    Google Scholar 

  • Smith, T. D., Reeves, R. R., Josephson, E. A. & Lund, J. N. Spatial and seasonal distribution of American whaling and whales in the age of sail. PLoS One 7, e34905 (2012).

    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • International Whaling Commission. Report of the Scientific Committee of the International Whaling Commission. J. Cetacean Res. Manage. 20 (Suppl.), 675 (2019).

  • Peterson, B. W. South Atlantic whaling: 1603–1830. Ph.D. thesis, University of California. (1948).

  • Palazzo, J. T. Jr., Groch, K. R. & Silveira, H. A. Projeto Baleia Franca: 25 anos de pesquisa e conservação, 1982–2007 (2007).

  • Reeves, R. R. & Smith, T. D. A taxonomy of world whaling. In Whales, Whaling, and Ocean Ecosystems (eds Estes, J. A. et al.) 82–101 (University of California Press, 2006).

    Google Scholar 

  • Richards, R. Past and present distributions of southern right whales (Eubalaena australis). N. Z. J. Zool. 36, 447–459 (2009).

    Google Scholar 

  • Harcourt, R., Van Der Hoop, J., Kraus, S. & Carroll, E. L. Future directions in Eubalaena spp.: comparative research to inform conservation. Front. Mar. Sci. 5, 530 (2019).

  • Cooke, J. G. & Zerbini, A. N. Eubalaena australis. IUCN Red List of Threatened Species 2018: e. T8153A50354147 (2018).

  • Ellis, M. Aspectos da pesca da baleia no Brasil colonial. Rev. Hist. Sao Paulo 14, 1–126 (1958).

    Google Scholar 

  • Ellis, M. A baleia no Brasil colonial (Melhoramentos, 1969).

  • Palazzo, J. T., Jr. & Carter, L. A. A caça de baleias no Brasil (AGAPAN, 1983).

  • Furniss, H. W. Whaling in Brazil. Bull. Int. Union Am. Republ. 2, 1048–1054 (1909).

    Google Scholar 

  • Acosta y Lara, E. F. Un ballenero inglés en la Cisplatina. Hoy es Historia 24, 82–88 (1987).

  • Moore, M. J. et al. Relative abundance of large whales around South Georgia (1979–1998). Mar. Mamm. Sci. 15, 1287–1302 (1999).

    Google Scholar 

  • Comerlato, F. A baleia como recurso energético no Brasil. Simpósio Internacional de História Ambiental e Migrações 1119–1138 (2010).

  • Comerlato, F. As armações baleeiras na configuração da costa catarinense em tempos coloniais. Tempos Históricos 15, 481–501 (2011).

    Google Scholar 

  • de Morais, I. O. B. et al. From the southern right whale hunting decline to the humpback whaling expansion: A review of whale catch records in the tropical western South Atlantic Ocean. Mammal Rev. 47, 11–23 (2017).

    Google Scholar 

  • American Whaling Logbook Data: A Database, by New Bedford Whaling Museum and Mystic Seaport Museum, Inc. Compilers Judith Lund and Tim Smith. Hosted at whalinghistory.org. (2020).

  • BSWF Databases. 2020. Compilers–A. G. E. Jones; Dale Chatwin; Rhys Richards. Contributors–Jane Clayton; Mark Howard. Hosted at whalinghistory.org

  • French Offshore Whaling Voyages: A Database, https://whalinghistory.org/fv/, Mystic Seaport Museum, Inc. and New Bedford Whaling Museum.

  • Allison, C. IWC summary catch database Version 6.1. (2016).

  • Vighi, M. et al. The missing whales: relevance of “struck and lost” rates for the impact assessment of historical whaling in the southwestern Atlantic Ocean. ICES J. Mar. Sci. 78, 14–24 (2021).

    Google Scholar 

  • McCullagh, P. & Nelder, J. Generalized Linear Models Monographs on Statistics and Applied Probability (Chapman and Hall, 1989).

    MATH 

    Google Scholar 

  • Zuur, A. F., Ieno, E. N., Walker, N. J., Saveliev, A. A. & Smith, G. M. Mixed Effects Model and Extension in Ecology with R (Springer, 2009).

    MATH 

    Google Scholar 

  • Ward, E., Zerbini, A., Kinas, P. G., Engel, M. H. & Adriolo, A. Estimates of growth rates of humpback whales (Megaptera novaeangliae) in the wintering grounds off the coast of Brazil (Breeding Stock A). J. Cetacean Res. Manag. (Special Issue) 3, 145–149 (2011).

    Google Scholar 

  • R Core Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria (2019).

  • Rowntree, V., Payne, R. & Schell, D. M. Changing patterns of habitat use by southern right whales (Eubalaena australis) on their nursery ground at Península Valdés, Argentina, and in their long-range movements. J. Cetacean Res. Manag. (Special Issue) 2, 133–143 (2001).

    Google Scholar 

  • de Valpine, P. & Hastings, A. Fitting population models incorporating process noise and observation error. Ecol. Monogr. 72, 57–76 (2002).

    Google Scholar 

  • Pella, J. J. & Tomlinson, P. K. A generalised stock production model. Int.-Am. Trop. Tuna Commun. Bull. 13, 421–496 (1969).

    Google Scholar 

  • Zerbini, A. N. et al. Assessing the recovery of an Antarctic predator from historical exploitation. R. Soc. Open Sci. 6, 190368 (2019).

    ADS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Halley, J. & Inchausti, P. Lognormality in ecological time series. Oikos 99, 518–530 (2002).

    Google Scholar 

  • Best, J. K. & Punt, A. E. Parameterizations for Bayesian state-space surplus production models. Fish. Res. 222, 105411 (2020).

    Google Scholar 

  • Walters, C. & Ludwig, D. Calculation of Bayes posterior probability distributions for key population parameters. Can. J. Fish. Aquat. Sci. 51, 713–722 (1994).

    Google Scholar 

  • International Whaling Commission. Annex I: report of the sub-committee on stock definition. J. Cetacean Res. Manag. 13(Supp.), 233–241 (2012).

  • Butterworth, D. S. & Punt, A. E. On the Bayesian approach suggested for the assessment of the Bering-Chukchi-Beaufort Seas stock of bowhead whales. Rep. Int. Whaling Commun. 45, 303–311 (1995).

    Google Scholar 

  • McAllister, M. K., Pikitch, E. K., Punt, A. E. & Hilborn, R. Bayesian approach to stock assessment and harvest decisions using the sampling/importance resampling algorithm. Can. J. Fish. Aquat. Sci. 12, 2673–2687 (1999).

    Google Scholar 

  • Best, P., Brandao, A. & Butterworth, D. Demographic parameters of southern right whales off South Africa. J. Cetacean Res. Manag. (Special Issue) 2, 161–169 (2001).

    Google Scholar 

  • Punt, A. E. et al. Robustness of potential biological removal to monitoring, environmental, and management uncertainties. ICES J. Mar. Sci. 77, 2491–2507 (2020).

    Google Scholar 

  • Pace, R. M., Corkeron, P. J. & Kraus, S. D. State-space mark-recapture estimates reveal a recent decline in abundance of North Atlantic right whales. Ecol. Evol. 7, 8730–8741 (2017).

    PubMed 
    PubMed Central 

    Google Scholar 

  • Sueyro, N., Crespo, E. A., Arias, M. & Coscarella, M. A. Density-dependent changes in the distribution of Southern right whales (Eubalaena australis) in the breeding ground Peninsula Valdés. PeerJ 6, e5957 (2018).

    PubMed 
    PubMed Central 

    Google Scholar 

  • Wilberg, M. J., Thorson, J. T., Linton, B. C. & Berkson, J. Incorporating time-varying catchability into population dynamic stock assessment models. Rev. Fish. Sci. 18, 7–24 (2010).

    Google Scholar 

  • Kass, R. E. & Raftery, A. E. Bayes factors. J. Am. Stat. Assoc. 90, 773–795 (1995).

    MathSciNet 
    MATH 

    Google Scholar 

  • Chang, Y. J. et al. Model selection and multi-model inference for Bayesian surplus production models: a case study for Pacific blue and striped marlin. Fish. Res. 166, 129–139 (2015).

    CAS 

    Google Scholar 

  • Barker, D. & Sibly, R. M. The effects of environmental perturbation and measurement error on estimates of the shape parameter in the theta-logistic model of population regulation. Ecol. Model. 219, 170–177 (2008).

    Google Scholar 

  • Dennis, B., Ponciano, J. M. & Taper, M. L. Replicated sampling increases efficiency in monitoring biological populations. Ecology 91, 610–620 (2010).

    PubMed 

    Google Scholar 

  • Punt, A. E. Review of contemporary cetacean stock assessment models. J. Cetacean Res. Manag. 17, 35–56 (2017).

    Google Scholar 

  • Punt, A. E., Butterworth, D. S., de Moor, C. L., De Oliveira, J. A. & Haddon, M. Management strategy evaluation: best practices. Fish Fish. 17, 303–334 (2016).

    Google Scholar 

  • Baker, C. S. & Clapham, P. J. Modelling the past and future of whales and whaling. Trends Ecol. Evol. 19, 365–371 (2004).

    Google Scholar 

  • Lotze, H. K. & Worm, B. Historical baselines for large marine animals. Trends Ecol. Evol. 24, 254–262 (2009).

    PubMed 

    Google Scholar 

  • Foley, C. M. & Lynch, H. J. A method to estimate pre-exploitation population size. Conserv. Biol. 34, 256–265 (2020).

    PubMed 

    Google Scholar 

  • Collins, A. C., Böhm, M. & Collen, B. Choice of baseline affects historical population trends in hunted mammals of North America. Biol. Conserv. 242, 108421 (2020).

    Google Scholar 

  • Jackson, J. A. et al. An integrated approach to historical population assessment of the great whales: Case of the New Zealand southern right whale. R. Soc. Open Sci. 3, 150669 (2016).

    ADS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Richards, R. & Du Pasquier, T. Bay whaling off southern Africa, c. 1785–1805. S. Afr. J. Mar. Sci. 8, 231–250 (1989).

    Google Scholar 

  • Brandão, A., Best, P. B. & Butterworth, D. S. Estimates of demographic parameters for southern right whales off South Africa from survey data from 1979 to 2006. IWC SC/62/BRG30 (2010).

  • Rowntree, V. J. et al. Unexplained recurring high mortality of southern right whale Eubalaena australis calves at Península Valdés, Argentina. Mar. Ecol. Progr. Ser. 493, 275–289 (2013).

    ADS 

    Google Scholar 

  • Valenzuela, L. O., Sironi, M., Rowntree, V. J. & Seger, J. Isotopic and genetic evidence for culturally inherited site fidelity to feeding grounds in southern right whales (Eubalaena australis). Mol. Ecol. 18, 782–791 (2009).

    CAS 
    PubMed 

    Google Scholar 

  • Clapham, P. J., Aguilar, A. & Hatch, L. T. Determining spatial and temporal scales for management: lessons from whaling. Mar. Mamm. Sci. 24, 183–201 (2008).

    Google Scholar 

  • Baker, C. S. et al. Strong maternal fidelity and natal philopatry shape genetic structure in North Pacific humpback whales. Mar. Ecol. Prog. Ser. 494, 291–306 (2013).

    ADS 

    Google Scholar 

  • González, C. V., Piola, A., O’Brien, T. D., Tormosov, D. D. & Acha, E. M. Circumpolar frontal systems as potential feeding grounds of Southern Right whales. Prog. Oceanogr. 176, 102123 (2019).

    Google Scholar 

  • Leaper, R. et al. Global climate drives southern right whale (Eubalaena australis) population dynamics. Biol. Lett. 2, 289–292 (2006).

    PubMed 
    PubMed Central 

    Google Scholar 

  • Seyboth, E. et al. Southern right whale (Eubalaena australis) reproductive success is influenced by krill (Euphausia superba) density and climate. Sci. Rep. 6, 28205 (2016).

    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Punt, A. E. Extending production models to include process error in the population dynamics. Can. J. Fish. Aquat. Sci. 60, 1217–1228 (2003).

    Google Scholar 

  • Tulloch, V. J., Plagányi, É. E., Brown, C., Richardson, A. J. & Matear, R. Future recovery of baleen whales is imperiled by climate change. Glob. Change Biol. 25, 1263–1281 (2019).

    ADS 

    Google Scholar 

  • Witting, L. Selection-delayed population dynamics in baleen whales and beyond. Popul. Ecol. 55, 377–401 (2013).

    Google Scholar 

  • Pante, E. & Benoit, S.-B. marmap: A package for importing, plotting and analyzing bathymetric and topographic data in R. PLoS ONE 8, e73051 (2013).

    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 

  • Wickham, H. ggplot2: Elegant Graphics for Data Analysis (Springer, 2016).

    MATH 

    Google Scholar 


  • Source: Ecology - nature.com

    Catabolic protein degradation in marine sediments confined to distinct archaea

    Study reveals chemical link between wildfire smoke and ozone depletion