Trinchet, J. C. et al. Complications and competing risks of death in compensated viral cirrhosis (ANRS CO12 CirVir prospective cohort). Hepatology 62, 737–750 (2015).
Google Scholar
Stanaway, J. D. et al. The global burden of viral hepatitis from 1990 to 2013: Findings from the Global Burden of Disease Study 2013. Lancet 388, 1081–1088 (2016).
Google Scholar
World Health Organization (WHO). Web Annex B. WHO estimates of the prevalence and incidence of hepatitis C virus infection by WHO region, 2015. In Global Hepatitis Report 2017. https://apps.who.int/iris/bitstream/handle/10665/277005/WHO-CDS-HIV-18.46-eng.pdf?ua=1. Accessed 01 Feb 2021.
Smith, D. B. et al. Proposed update to the taxonomy of the genera Hepacivirus and Pegivirus within the Flaviviridae family. J. Gen. Virol. 97(11), 2894–2907 (2016).
Google Scholar
Kapoor, A. et al. Characterization of a canine homolog of hepatitis C virus. Proc Natl Acad Sci USA 108, 11608–11613 (2011).
Google Scholar
Quan, P. L. et al. Bats are a major natural reservoir for hepaciviruses and pegiviruses. Proc Natl Acad Sci USA 110, 8194–8199 (2013).
Google Scholar
Burbelo, P. D. et al. Serology-enabled discovery of genetically diverse hepaciviruses in a new host. J Virol 86, 6171–6178 (2012).
Google Scholar
Drexler, J. F. et al. Evidence for novel hepaciviruses in rodents. PLoS Pathog 9, e1003438 (2013).
Google Scholar
Shi, Y. New virus, new challenge. Innovation (NY) 1(1), 100005 (2020).
Shi, M. et al. The evolutionary history of vertebrate RNA viruses. Nature 556, 197–202 (2018).
Google Scholar
Baechlein, C. et al. Identification of a novel hepacivirus in domestic cattle from Germany. J Virol 89, 7007–7015 (2015).
Google Scholar
Corman, V. M. et al. Highly divergent hepaciviruses from African cattle. J Virol. 89, 5876–5882 (2015).
Google Scholar
Simmonds, P. et al. ICTV virus taxonomy profile: Flaviviridae. J Gen Virol 98, 2–3 (2017).
Google Scholar
Elia, G. et al. Genetic heterogeneity of bovine hepacivirus in Italy. Transbound Emerg Dis. 67, 2731–2740 (2020).
Google Scholar
Li, L. L. et al. Detection and characterization of a novel hepacivirus in long-tailed ground squirrels (Spermophilus undulatus) in China. Arch Virol 164(9), 2401–2410 (2019).
Google Scholar
Zhang, X. L. et al. A highly divergent hepacivirus identified in domestic ducks further reveals the genetic diversity of hepaciviruses. Viruses 14(2), 371 (2022).
Google Scholar
Lu, G., Ou, J., Zhao, J. & Li, S. Presence of a novel subtype of bovine hepacivirus in China and expanded classification of bovine hepacivirus strains worldwide into 7 subtypes. Viruses 11, 843 (2019).
Google Scholar
da Silva, M. S. et al. Comprehensive evolutionary and phylogenetic analysis of Hepacivirus N (HNV). J Gen Virol. 99, 890–896 (2018).
Google Scholar
Shao, J. W. et al. A novel subtype of bovine hepacivirus identified in ticks reveals the genetic diversity and evolution of bovine hepacivirus. Viruses 13(11), 2206 (2021).
Google Scholar
Baechlein, C. et al. Further characterization of bovine hepacivirus: Antibody response, course of infection, and host tropism. Transbound. Emerg. Dis. 66, 195–206 (2019).
Google Scholar
Varela-Castro, L., Alvarez, V., Sevilla, I. A. & Barral, M. Risk factors associated to a high Mycobacterium tuberculosis complex seroprevalence in wild boar (Sus scrofa) from a low bovine tuberculosis prevalence area. PLoS ONE 15, e0231559 (2020).
Google Scholar
Palombieri, A. et al. Surveillance study of Hepatitis E Virus (HEV) in domestic and wild ruminants in Northwestern Italy. Animals 10(12), 2351 (2020).
Google Scholar
Bukh, J. Hepatitis C homolog in dogs with respiratory illness. Proc Natl Acad Sci U S A. 108, 12563–12564 (2011).
Google Scholar
Elia, G. et al. Identification and genetic characterization of equine hepaciviruses in Italy. Vet. Microbiol. 207, 239–247 (2017).
Google Scholar
Hartlage, A. S., Cullen, J. M. & Kapoor, A. The strange, expanding world of animal hepaciviruses. Annu Rev Virol. 3, 53–75 (2016).
Google Scholar
Canal, C. W. et al. A novel genetic group of bovine hepacivirus in archival serum samples from Brazilian cattle. Biomed Res Int. 2017, 4732520 (2017).
Google Scholar
Deng, Y., Guan, S. H., Wang, S., Hao, G. & Rasmussen, T. B. The detection and phylogenetic analysis of Bovine Hepacivirus in China. Biomed Res Int. 2018, 6216853 (2018).
Google Scholar
Yeşilbağ, K. et al. Presence of bovine hepacivirus in Turkish cattle. Vet. Microbiol. 225, 1–5 (2018).
Google Scholar
Anggakusuma, et al. Hepacivirus NS3/4A proteases interfere with MAVS signaling in both their cognate animal hosts and humans: Implications for zoonotic transmission. J Virol. 90(23), 10670–10681 (2016).
Google Scholar
El-Attar, L. M. R., Mitchell, J. A., BrooksBrownlie, H., Priestnall, S. L. & Brownlie, J. Detection of non-primate hepaciviruses in UK dogs. Virology 484, 93–102 (2015).
Google Scholar
Thézé, J., Lowes, S., Parker, J. & Pybus, O. G. Evolutionary and phylogenetic analysis of the Hepaciviruses and Pegiviruses. Genome Biol Evol. 7(11), 2996–3008 (2015).
Google Scholar
Charrel, R. N., de Chesse, R., Decaudin, A., De Micco, P. & de Lamballerie, X. Evaluation of disinfectant efficacy against hepatitis C virus using a RT-PCR-based method. J. Hosp. Infect. 49(2), 129–134 (2001).
Google Scholar
Pavio, N., Doceul, V., Bagdassarian, E. & Johne, R. Recent knowledge on hepatitis E virus in Suidae reservoirs and transmission routes to human. Vet Res. 48(1), 78 (2017).
Google Scholar
Scherer, C. et al. Moving infections: Individual movement decisions drive disease persistence in spatially structured landscapes. Oikos 129, 651–667 (2020).
Google Scholar
Tamura, K. & Nei, M. Estimation of the number of nucleotide substitution in the control region of mitochondrial DNA in human and chimpanzees. Mol. Biol. Evol. 10, 512–526 (1993).
Google Scholar
Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. MEGA X: Molecular Evolutionary Genetics Analysis across computing platforms. Mol. Biol. Evol. 35, 1547–1549 (2018).
Google Scholar
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