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A cysteine-rich diet may promote regeneration of the intestinal lining, study suggests

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A diet rich in the amino acid cysteine may have rejuvenating effects in the small intestine, according to a new study from MIT. This amino acid, the researchers discovered, can turn on an immune signaling pathway that helps stem cells to regrow new intestinal tissue.This enhanced regeneration may help to heal injuries from radiation, which often occur in patients undergoing radiation therapy for cancer. The research was conducted in mice, but if future research shows similar results in humans, then delivering elevated quantities of cysteine, through diet or supplements, could offer a new strategy to help damaged tissue heal faster, the researchers say.“The study suggests that if we give these patients a cysteine-rich diet or cysteine supplementation, perhaps we can dampen some of the chemotherapy or radiation-induced injury,” says Omer Yilmaz, director of the MIT Stem Cell Initiative, an associate professor of biology at MIT, and a member of MIT’s Koch Institute for Integrative Cancer Research. “The beauty here is we’re not using a synthetic molecule; we’re exploiting a natural dietary compound.”While previous research has shown that certain types of diets, including low-calorie diets, can enhance intestinal stem cell activity, the new study is the first to identify a single nutrient that can help intestinal cells to regenerate.Yilmaz is the senior author of the study, which appears today in Nature. Koch Institute postdoc Fangtao Chi is the paper’s lead author.Boosting regenerationIt is well-established that diet can affect overall health: High-fat diets can lead to obesity, diabetes, and other health problems, while low-calorie diets have been shown to extend lifespans in many species. In recent years, Yilmaz’s lab has investigated how different types of diets influence stem cell regeneration, and found that high-fat diets, as well as short periods of fasting, can enhance stem cell activity in different ways.“We know that macro diets such as high-sugar diets, high-fat diets, and low-calorie diets have a clear impact on health. But at the granular level, we know much less about how individual nutrients impact stem cell fate decisions, as well as tissue function and overall tissue health,” Yilmaz says.In their new study, the researchers began by feeding mice a diet high in one of 20 different amino acids, the building blocks of proteins. For each group, they measured how the diet affected intestinal stem cell regeneration. Among these amino acids, cysteine had the most dramatic effects on stem cells and progenitor cells (immature cells that differentiate into adult intestinal cells).Further studies revealed that cysteine initiates a chain of events leading to the activation of a population of immune cells called CD8 T cells. When cells in the lining of the intestine absorb cysteine from digested food, they convert it into CoA, a cofactor that is released into the mucosal lining of the intestine. There, CD8 T cells absorb CoA, which stimulates them to begin proliferating and producing a cytokine called IL-22.IL-22 is an important player in the regulation of intestinal stem cell regeneration, but until now, it wasn’t known that CD8 T cells can produce it to boost intestinal stem cells. Once activated, those IL-22-releasing T cells are primed to help combat any kind of injury that could occur within the intestinal lining.“What’s really exciting here is that feeding mice a cysteine-rich diet leads to the expansion of an immune cell population that we typically don’t associate with IL-22 production and the regulation of intestinal stemness,” Yilmaz says. “What happens in a cysteine-rich diet is that the pool of cells that make IL-22 increases, particularly the CD8 T-cell fraction.”These T cells tend to congregate within the lining of the intestine, so they are already in position when needed. The researchers found that the stimulation of CD8 T cells occurred primarily in the small intestine, not in any other part of the digestive tract, which they believe is because most of the protein that we consume is absorbed by the small intestine.Healing the intestineIn this study, the researchers showed that regeneration stimulated by a cysteine-rich diet could help to repair radiation damage to the intestinal lining. Also, in work that has not been published yet, they showed that a high-cysteine diet had a regenerative effect following treatment with a chemotherapy drug called 5-fluorouracil. This drug, which is used to treat colon and pancreatic cancers, can also damage the intestinal lining.Cysteine is found in many high-protein foods, including meat, dairy products, legumes, and nuts. The body can also synthesize its own cysteine, by converting the amino acid methionine to cysteine — a process that takes place in the liver. However, cysteine produced in the liver is distributed through the entire body and doesn’t lead to a buildup in the small intestine the way that consuming cysteine in the diet does.“With our high-cysteine diet, the gut is the first place that sees a high amount of cysteine,” Chi says.Cysteine has been previously shown to have antioxidant effects, which are also beneficial, but this study is the first to demonstrate its effect on intestinal stem cell regeneration. The researchers now hope to study whether it may also help other types of stem cells regenerate new tissues. In one ongoing study, they are investigating whether cysteine might stimulate hair follicle regeneration.They also plan to further investigate some of the other amino acids that appear to influence stem cell regeneration.“I think we’re going to uncover multiple new mechanisms for how these amino acids regulate cell fate decisions and gut health in the small intestine and colon,” Yilmaz says.The research was funded, in part, by the National Institutes of Health, the V Foundation, the Kathy and Curt Marble Cancer Research Award, the Koch Institute-Dana-Farber/Harvard Cancer Center Bridge Project, the American Federation for Aging Research, the MIT Stem Cell Initiative, and the Koch Institute Support (core) Grant from the National Cancer Institute. More

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    A cysteine-rich diet may promote regeneration of the intestinal lining, study suggests

    A diet rich in the amino acid cysteine may have rejuvenating effects in the small intestine, according to a new study from MIT. This amino acid, the researchers discovered, can turn on an immune signaling pathway that helps stem cells to regrow new intestinal tissue.This enhanced regeneration may help to heal injuries from radiation, which often occur in patients undergoing radiation therapy for cancer. The research was conducted in mice, but if future research shows similar results in humans, then delivering elevated quantities of cysteine, through diet or supplements, could offer a new strategy to help damaged tissue heal faster, the researchers say.“The study suggests that if we give these patients a cysteine-rich diet or cysteine supplementation, perhaps we can dampen some of the chemotherapy or radiation-induced injury,” says Omer Yilmaz, director of the MIT Stem Cell Initiative, an associate professor of biology at MIT, and a member of MIT’s Koch Institute for Integrative Cancer Research. “The beauty here is we’re not using a synthetic molecule; we’re exploiting a natural dietary compound.”While previous research has shown that certain types of diets, including low-calorie diets, can enhance intestinal stem cell activity, the new study is the first to identify a single nutrient that can help intestinal cells to regenerate.Yilmaz is the senior author of the study, which appears today in Nature. Koch Institute postdoc Fangtao Chi is the paper’s lead author.Boosting regenerationIt is well-established that diet can affect overall health: High-fat diets can lead to obesity, diabetes, and other health problems, while low-calorie diets have been shown to extend lifespans in many species. In recent years, Yilmaz’s lab has investigated how different types of diets influence stem cell regeneration, and found that high-fat diets, as well as short periods of fasting, can enhance stem cell activity in different ways.“We know that macro diets such as high-sugar diets, high-fat diets, and low-calorie diets have a clear impact on health. But at the granular level, we know much less about how individual nutrients impact stem cell fate decisions, as well as tissue function and overall tissue health,” Yilmaz says.In their new study, the researchers began by feeding mice a diet high in one of 20 different amino acids, the building blocks of proteins. For each group, they measured how the diet affected intestinal stem cell regeneration. Among these amino acids, cysteine had the most dramatic effects on stem cells and progenitor cells (immature cells that differentiate into adult intestinal cells).Further studies revealed that cysteine initiates a chain of events leading to the activation of a population of immune cells called CD8 T cells. When cells in the lining of the intestine absorb cysteine from digested food, they convert it into CoA, a cofactor that is released into the mucosal lining of the intestine. There, CD8 T cells absorb CoA, which stimulates them to begin proliferating and producing a cytokine called IL-22.IL-22 is an important player in the regulation of intestinal stem cell regeneration, but until now, it wasn’t known that CD8 T cells can produce it to boost intestinal stem cells. Once activated, those IL-22-releasing T cells are primed to help combat any kind of injury that could occur within the intestinal lining.“What’s really exciting here is that feeding mice a cysteine-rich diet leads to the expansion of an immune cell population that we typically don’t associate with IL-22 production and the regulation of intestinal stemness,” Yilmaz says. “What happens in a cysteine-rich diet is that the pool of cells that make IL-22 increases, particularly the CD8 T-cell fraction.”These T cells tend to congregate within the lining of the intestine, so they are already in position when needed. The researchers found that the stimulation of CD8 T cells occurred primarily in the small intestine, not in any other part of the digestive tract, which they believe is because most of the protein that we consume is absorbed by the small intestine.Healing the intestineIn this study, the researchers showed that regeneration stimulated by a cysteine-rich diet could help to repair radiation damage to the intestinal lining. Also, in work that has not been published yet, they showed that a high-cysteine diet had a regenerative effect following treatment with a chemotherapy drug called 5-fluorouracil. This drug, which is used to treat colon and pancreatic cancers, can also damage the intestinal lining.Cysteine is found in many high-protein foods, including meat, dairy products, legumes, and nuts. The body can also synthesize its own cysteine, by converting the amino acid methionine to cysteine — a process that takes place in the liver. However, cysteine produced in the liver is distributed through the entire body and doesn’t lead to a buildup in the small intestine the way that consuming cysteine in the diet does.“With our high-cysteine diet, the gut is the first place that sees a high amount of cysteine,” Chi says.Cysteine has been previously shown to have antioxidant effects, which are also beneficial, but this study is the first to demonstrate its effect on intestinal stem cell regeneration. The researchers now hope to study whether it may also help other types of stem cells regenerate new tissues. In one ongoing study, they are investigating whether cysteine might stimulate hair follicle regeneration.They also plan to further investigate some of the other amino acids that appear to influence stem cell regeneration.“I think we’re going to uncover multiple new mechanisms for how these amino acids regulate cell fate decisions and gut health in the small intestine and colon,” Yilmaz says.The research was funded, in part, by the National Institutes of Health, the V Foundation, the Kathy and Curt Marble Cancer Research Award, the Koch Institute-Dana-Farber/Harvard Cancer Center Bridge Project, the American Federation for Aging Research, the MIT Stem Cell Initiative, and the Koch Institute Support (core) Grant from the National Cancer Institute. More

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    3 Questions: Addressing the world’s most pressing challenges

    The Center for International Studies (CIS) empowers students, faculty, and scholars to bring MIT’s interdisciplinary style of research and scholarship to address complex global challenges. In this Q&A, Mihaela Papa, the center’s director of research and a principal research scientist at MIT, describes her role as well as research within the BRICS Lab at MIT — a reference to the BRICS intergovernmental organization, which comprises the nations of Brazil, Russia, India, China, South Africa, Egypt, Ethiopia, Indonesia, Iran and the United Arab Emirates. She also discusses the ongoing mission of CIS to tackle the world’s most complex challenges in new and creative ways.Q: What is your role at CIS, and some of your key accomplishments since joining the center just over a year ago?A: I serve as director of research and principal research scientist at CIS, a role that bridges management and scholarship. I oversee grant and fellowship programs, spearhead new research initiatives, build research communities across our center’s area programs and MIT schools, and mentor the next generation of scholars. My academic expertise is in international relations, and I publish on global governance and sustainable development, particularly through my new BRICS Lab. This past year, I focused on building collaborative platforms that highlight CIS’ role as an interdisciplinary hub and expand its research reach. With Evan Lieberman, the director of CIS, I launched the CIS Global Research and Policy Seminar series to address current challenges in global development and governance, foster cross-disciplinary dialogue, and connect theoretical insights to policy solutions. We also convened a Climate Adaptation Workshop, which examined promising strategies for financing adaptation and advancing policy innovation. We documented the outcomes in a workshop report that outlines a broader research agenda contributing to MIT’s larger climate mission.In parallel, I have been reviewing CIS’ grant-making programs to improve how we serve our community, while also supporting regional initiatives such as research planning related to Ukraine. Together with the center’s MIT-Brazil faculty director Brad Olsen, I secured a MITHIC [MIT Human Insight Collaboration] Connectivity grant to build an MIT Amazonia research community that connects MIT scholars with regional partners and strengthens collaboration across the Amazon. Finally, I launched the BRICS Lab to analyze transformations in global governance and have ongoing research on BRICS and food security and data centers in BRICS. Q: Tell us more about the BRICS Lab.A: The BRICS countries comprise the majority of the world’s population and an expanding share of the global economy. [Originally comprising Brazil, Russia, India, and China, BRICS currently includes 11 nations.] As a group, they carry the collective weight to shape international rules, influence global markets, and redefine norms — yet the question remains: Will they use this power effectively? The BRICS Lab explores the implications of the bloc’s rise for international cooperation and its role in reshaping global politics. Our work focuses on three areas: the design and strategic use of informal groups like BRICS in world affairs; the coalition’s potential to address major challenges such as food security, climate change, and artificial intelligence; and the implications of U.S. policy toward BRICS for the future of multilateralism.Q: What are the center’s biggest research priorities right now?A: Our center was founded in response to rising geopolitical tensions and the urgent need for policy rooted in rigorous, evidence-based research. Since then, we have grown into a hub that combines interdisciplinary scholarship and actively engages with policymakers and the public. Today, as in our early years, the center brings together exceptional researchers with the ambition to address the world’s most pressing challenges in new and creative ways.Our core focus spans security, development, and human dignity. Security studies have been a priority for the center, and our new nuclear security programming advances this work while training the next generation of scholars in this critical field. On the development front, our work has explored how societies manage diverse populations, navigate international migration, as well as engage with human rights and the changing patterns of regime dynamics.We are pursuing new research in three areas. First, on climate change, we seek to understand how societies confront environmental risks and harms, from insurance to water and food security in the international context. Second, we examine shifting patterns of global governance as rising powers set new agendas and take on greater responsibilities in the international system. Finally, we are initiating research on the impact of AI — how it reshapes governance across international relations, what is the role of AI corporations, and how AI-related risks can be managed.As we approach our 75th anniversary in 2026, we are excited to bring researchers together to spark bold ideas that open new possibilities for the future. More

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    A beacon of light

    Placing a lit candle in a window to welcome friends and strangers is an old Irish tradition that took on greater significance when Mary Robinson was elected president of Ireland in 1990. At the time, Robinson placed a lamp in Áras an Uachtaráin — the official residence of Ireland’s presidents — noting that the Irish diaspora and all others are always welcome in Ireland. Decades later, a lit lamp remains in a window in Áras an Uachtaráin.The symbolism of Robinson’s lamp was shared by Hashim Sarkis, dean of the MIT School of Architecture and Planning (SA+P), at the school’s graduation ceremony in May, where Robinson addressed the class of 2025. To replicate the generous intentions of Robinson’s lamp and commemorate her visit to MIT, Sarkis commissioned a unique lantern as a gift for Robinson. He commissioned an identical one for his office, which is in the front portico of MIT at 77 Massachusetts Ave.“The lamp will welcome all citizens of the world to MIT,” says Sarkis.

    Geolectric: Sustainable, Low-Carbon Ceramics for Embedded Electronics and Interaction DesignVideo: MIT Design Intelligence Lab

    No ordinary lanternThe bespoke lantern was created by Marcelo Coelho SM ’08, PhD ’12, director of the Design Intelligence Lab and associate professor of the practice in the Department of Architecture.One of several projects in the Geoletric research at the Design Intelligence Lab, the lantern showcases the use of geopolymers as a sustainable material alternative for embedded computers and consumer electronics.“The materials that we use to make computers have a negative impact on climate, so we’re rethinking how we make products with embedded electronics — such as a lamp or lantern — from a climate perspective,” says Coelho.Consumer electronics rely on materials that are high in carbon emissions and difficult to recycle. As the demand for embedded computing increases, so too does the need for alternative materials that have a reduced environmental impact while supporting electronic functionality.The Geolectric lantern advances the formulation and application of geopolymers — a class of inorganic materials that form covalently bonded, non-crystalline networks. Unlike traditional ceramics, geopolymers do not require high-temperature firing, allowing electronic components to be embedded seamlessly during production.Geopolymers are similar to ceramics, but have a lower carbon footprint and present a sustainable alternative for consumer electronics, product design, and architecture. The minerals Coelho uses to make the geopolymers — aluminum silicate and sodium silicate — are those regularly used to make ceramics.“Geopolymers aren’t particularly new, but are becoming more popular,” says Coelho. “They have high strength in both tension and compression, superior durability, fire resistance, and thermal insulation. Compared to concrete, geopolymers don’t release carbon dioxide. Compared to ceramics, you don’t have to worry about firing them. What’s even more interesting is that they can be made from industrial byproducts and waste materials, contributing to a circular economy and reducing waste.”The lantern is embedded with custom electronics that serve as a proximity and touch sensor. When a hand is placed over the top, light shines down the glass tubes.The timeless design of the Geoelectric lantern — minimalist, composed of natural materials — belies its future-forward function. Coelho’s academic background is in fine arts and computer science. Much of his work, he says, “bridges these two worlds.”Working at the Design Intelligence Lab with Coelho on the lanterns are Jacob Payne, a graduate architecture student, and Jean-Baptiste Labrune, a research affiliate.A light for MITA few weeks before commencement, Sarkis saw the Geoelectric lantern in Palazzo Diedo Berggruen Arts and Culture in Venice, Italy. The exhibition, a collateral event of the Venice Biennale’s 19th International Architecture Exhibition, featured the work of 40 MIT architecture faculty.The sustainability feature of Geolectric is the key reason Sarkis regarded the lantern as the perfect gift for Robinson. After her career in politics, Robinson founded the Mary Robinson Foundation — Climate Justice, an international center addressing the impacts of climate change on marginalized communities.The third iteration of Geolectric for Sarkis’ office is currently underway. While the lantern was a technical prototype and an opportunity to showcase his lab’s research, Coelho — an immigrant from Brazil — was profoundly touched by how Sarkis created the perfect symbolism to both embody the welcoming spirit of the school and honor President Robinson.“When the world feels most fragile, we need to urgently find sustainable and resilient solutions for our built environment. It’s in the darkest times when we need light the most,” says Coelho.  More

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    Q&A: David Whelihan on the challenges of operating in the Arctic

    To most, the Arctic can feel like an abstract place, difficult to imagine beyond images of ice and polar bears. But researcher David Whelihan of MIT Lincoln Laboratory’s Advanced Undersea Systems and Technology Group is no stranger to the Arctic. Through Operation Ice Camp, a U.S. Navy–sponsored biennial mission to assess operational readiness in the Arctic region, he has traveled to this vast and remote wilderness twice over the past few years to test low-cost sensor nodes developed by the group to monitor loss in Arctic sea ice extent and thickness. The research team envisions establishing a network of such sensors across the Arctic that will persistently detect ice-fracturing events and correlate these events with environmental conditions to provide insights into why the sea ice is breaking up. Whelihan shared his perspectives on why the Arctic matters and what operating there is like.Q: Why do we need to be able to operate in the Arctic?A: Spanning approximately 5.5 million square miles, the Arctic is huge, and one of its salient features is that the ice covering much of the Arctic Ocean is decreasing in volume with every passing year. Melting ice opens up previously impassable areas, resulting in increasing interest from potential adversaries and allies alike for activities such as military operations, commercial shipping, and natural resource extraction. Through Alaska, the United States has approximately 1,060 miles of Arctic coastline that is becoming much more accessible because of reduced ice cover. So, U.S. operation in the Arctic is a matter of national security.  Q: What are the technological limitations to Arctic operations?A: The Arctic is an incredibly harsh environment. The cold kills battery life, so collecting sensor data at high rates over long periods of time is very difficult. The ice is dynamic and can easily swallow or crush sensors. In addition, most deployments involve “boots-on-the-ice,” which is expensive and at times dangerous. One of the technological limitations is how to deploy sensors while keeping humans alive.

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    David Whelihan details the difficulties of engineering technologies that can survive in the harsh conditions of the Arctic.

    Q: How does the group’s sensor node R&D work seek to support Arctic operations?A: A lot of the work we put into our sensors pertains to deployability. Our ultimate goal is to free researchers from going onto the ice to deploy sensors. This goal will become increasingly necessary as the shrinking ice pack becomes more dynamic, unstable, and unpredictable. At the last Operation Ice Camp (OIC) in March 2024, we built and rapidly tested deployable and recoverable sensors, as well as novel concepts such as using UAVs (uncrewed aerial vehicles), or drones, as “data mules” that can fly out to and interrogate the sensors to see what they captured. We also built a prototype wearable system that cues automatic download of sensor data over Wi-Fi so that operators don’t have to take off their gloves.Q: The Arctic Circle is the northernmost region on Earth. How do you reach this remote place?A: We usually fly on commercial airlines from Boston to Seattle to Anchorage to Prudhoe Bay on the North Slope of Alaska. From there, the Navy flies us on small prop planes, like Single and Twin Otters, about 200 miles north and lands us on an ice runway built by the Navy’s Arctic Submarine Lab (ASL). The runway is part of a temporary camp that ASL establishes on floating sea ice for their operational readiness exercises conducted during OIC.Q: Think back to the first time you stepped foot in the Arctic. Can you paint a picture of what you experienced?A: My first experience was at Prudhoe Bay, coming out of the airport, which is a corrugated metal building with a single gate. Before you open the door to the outside, a sign warns you to be on the lookout for polar bears. Walking out into the sheer desolation and blinding whiteness of everything made me realize I was experiencing something very new.When I flew out onto the ice and stepped out of the plane, I was amazed that the area could somehow be even more desolate. Bright white snowy ice goes in every direction, broken up by pressure ridges that form when ice sheets collide. The sun is low, and seems to move horizontally only. It is very hard to tell the time. The air temperature is really variable. On our first trip in 2022, it really wasn’t (relatively) that cold — only around minus 5 or 10 degrees during the day. On our second trip in 2024, we were hit by minus 30 almost every day, and with winds of 20 to 25 miles per hour. The last night we were on the ice that year, it warmed up a bit to minus 10 to 20, but the winds kicked up and started blowing snow onto the heaters attached to our tents. Those heaters started failing one by one as the blowing snow covered them, blocking airflow. After our heater failed, I asked myself, while warm in my bed, whether I wanted to go outside to the command tent for help or try to make it until dawn in my thick sleeping bag. I picked the first option, but mostly because the heater control was beeping loudly right next to my bunk, so I couldn’t sleep anyway. Shout-out to the ASL staff who ran around fixing heaters all night!Q: How do you survive in a place generally inhospitable to humans?A: In partnership with the native population, ASL brings a lot of gear — from insulated, heated tents and communications equipment to large snowblowers to keep the runway clear. A few months before OIC, participants attend training on what conditions you will be exposed to and how to protect yourself through appropriate clothing, and how to use survival gear in case of an emergency.Q: Do you have plans to return to the Arctic?  A: We are hoping to go back this winter as part of OIC 2026! We plan to test a through-ice communication device. Communicating through 4 to 12 feet of ice is pretty tricky but could allow us to connect underwater drones and stationary sensors under the ice to the rest of the world. To support the through-ice communication system, we will repurpose our sensor-node boxes deployed during OIC 2024. If this setup works, those same boxes could be used as control centers for all sorts of undersea systems and relay information about the under-ice world back home via satellite.Q: What lessons learned will you bring to your upcoming trip, and any potential future trips?A: After the first trip, I had a visceral understanding of how hard operating there is. Prototyping of systems becomes a different game. Prototypes are often fragile, but fragility doesn’t go over too well on the ice. So, there is a robustification step, which can take some time.On this last trip, I realized that you have to really be careful with your energy expenditure and pace yourself. While the average adult may require about 2,000 calories a day, an Arctic explorer may burn several times more than that exerting themselves (we do a lot of walking around camp) and keeping warm. Usually, we live on the same freeze-dried food that you would take on camping trips. Each package only has so many calories, so you find yourself eating multiple of those and supplementing with lots of snacks such as Clif Bars or, my favorite, Babybel cheeses (which I bring myself). You also have to be really careful of dehydration. Your body’s reaction to extreme cold is to reduce blood flow to your skin, which generally results in less liquid in your body. We have to drink constantly — water, cocoa, and coffee — to avoid dehydration.We only have access to the ice every two years with the Navy, so we try to make the most of our time. In the several-day lead-up to our field expedition, my research partner Ben and I were really pushing ourselves to ready our sensor nodes for deployment and probably not eating and drinking as regularly as we should. When we ventured to our sensor deployment site about 5 kilometers outside of camp, I had to learn to slow down so I didn’t sweat under my gear, as sweating in the extremely cold conditions can quickly lead to hypothermia. I also learned to pay more attention to exposed places on my face, as I got a bit of frostnip around my goggles.Operating in the Arctic is a fine balance: you can’t spend too much time out there, but you also can’t rush. More

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    MIT geologists discover where energy goes during an earthquake

    The ground-shaking that an earthquake generates is only a fraction of the total energy that a quake releases. A quake can also generate a flash of heat, along with a domino-like fracturing of underground rocks. But exactly how much energy goes into each of these three processes is exceedingly difficult, if not impossible, to measure in the field.Now MIT geologists have traced the energy that is released by “lab quakes” — miniature analogs of natural earthquakes that are carefully triggered in a controlled laboratory setting. For the first time, they have quantified the complete energy budget of such quakes, in terms of the fraction of energy that goes into heat, shaking, and fracturing.They found that only about 10 percent of a lab quake’s energy causes physical shaking. An even smaller fraction — less than 1 percent — goes into breaking up rock and creating new surfaces. The overwhelming portion of a quake’s energy — on average 80 percent — goes into heating up the immediate region around a quake’s epicenter. In fact, the researchers observed that a lab quake can produce a temperature spike hot enough to melt surrounding material and turn it briefly into liquid melt.The geologists also found that a quake’s energy budget depends on a region’s deformation history — the degree to which rocks have been shifted and disturbed by previous tectonic motions. The fractions of quake energy that produce heat, shaking, and rock fracturing can shift depending on what the region has experienced in the past.“The deformation history — essentially what the rock remembers — really influences how destructive an earthquake could be,” says Daniel Ortega-Arroyo, a graduate student in MIT’s Department of Earth, Atmospheric and Planetary Sciences (EAPS). “That history affects a lot of the material properties in the rock, and it dictates to some degree how it is going to slip.”The team’s lab quakes are a simplified analog of what occurs during a natural earthquake. Down the road, their results could help seismologists predict the likelihood of earthquakes in regions that are prone to seismic events. For instance, if scientists have an idea of how much shaking a quake generated in the past, they might be able to estimate the degree to which the quake’s energy also affected rocks deep underground by melting or breaking them apart. This in turn could reveal how much more or less vulnerable the region is to future quakes.“We could never reproduce the complexity of the Earth, so we have to isolate the physics of what is happening, in these lab quakes,” says Matěj Peč, associate professor of geophysics at MIT. “We hope to understand these processes and try to extrapolate them to nature.”Peč (pronounced “Peck”) and Ortega-Arroyo reported their results on Aug. 28 in the journal AGU Advances. Their MIT co-authors are Hoagy O’Ghaffari and Camilla Cattania, along with Zheng Gong and Roger Fu at Harvard University and Markus Ohl and Oliver Plümper at Utrecht University in the Netherlands.Under the surfaceEarthquakes are driven by energy that is stored up in rocks over millions of years. As tectonic plates slowly grind against each other, stress accumulates through the crust. When rocks are pushed past their material strength, they can suddenly slip along a narrow zone, creating a geologic fault. As rocks slip on either side of the fault, they produce seismic waves that ripple outward and upward.We perceive an earthquake’s energy mainly in the form of ground shaking, which can be measured using seismometers and other ground-based instruments. But the other two major forms of a quake’s energy — heat and underground fracturing — are largely inaccessible with current technologies.“Unlike the weather, where we can see daily patterns and measure a number of pertinent variables, it’s very hard to do that very deep in the Earth,” Ortega-Arroyo says. “We don’t know what’s happening to the rocks themselves, and the timescales over which earthquakes repeat within a fault zone are on the century-to-millenia timescales, making any sort of actionable forecast challenging.”To get an idea of how an earthquake’s energy is partitioned, and how that energy budget might affect a region’s seismic risk, he and Peč went into the lab. Over the last seven years, Peč’s group at MIT has developed methods and instrumentation to simulate seismic events, at the microscale, in an effort to understand how earthquakes at the macroscale may play out.“We are focusing on what’s happening on a really small scale, where we can control many aspects of failure and try to understand it before we can do any scaling to nature,” Ortega-Arroyo says.MicroshakesFor their new study, the team generated miniature lab quakes that simulate a seismic slipping of rocks along a fault zone. They worked with small samples of granite, which are representative of rocks in the seismogenic layer — the geologic region in the continental crust where earthquakes typically originate. They ground up the granite into a fine powder and mixed the crushed granite with a much finer powder of magnetic particles, which they used as a sort of internal temperature gauge. (A particle’s magnetic field strength will change in response to a fluctuation in temperature.)The researchers placed samples of the powdered granite — each about 10 square millimeters and 1 millimeter thin — between two small pistons and wrapped the ensemble in a gold jacket. They then applied a strong magnetic field to orient the powder’s magnetic particles in the same initial direction and to the same field strength. They reasoned that any change in the particles’ orientation and field strength afterward should be a sign of how much heat that region experienced as a result of any seismic event.Once samples were prepared, the team placed them one at a time into a custom-built apparatus that the researchers tuned to apply steadily increasing pressure, similar to the pressures that rocks experience in the Earth’s seismogenic layer, about 10 to 20 kilometers below the surface. They used custom-made piezoelectric sensors, developed by co-author O’Ghaffari, which they attached to either end of a sample to measure any shaking that occurred as they increased the stress on the sample.They observed that at certain stresses, some samples slipped, producing a microscale seismic event similar to an earthquake. By analyzing the magnetic particles in the samples after the fact, they obtained an estimate of how much each sample was temporarily heated — a method developed in collaboration with Roger Fu’s lab at Harvard University. They also estimated the amount of shaking each sample experienced, using measurements from the piezoelectric sensor and numerical models. The researchers also examined each sample under the microscope, at different magnifications, to assess how the size of the granite grains changed — whether and how many grains broke into smaller pieces, for instance.From all these measurements, the team was able to estimate each lab quake’s energy budget. On average, they found that about 80 percent of a quake’s energy goes into heat, while 10 percent generates shaking, and less than 1 percent goes into rock fracturing, or creating new, smaller particle surfaces. “In some instances we saw that, close to the fault, the sample went from room temperature to 1,200 degrees Celsius in a matter of microseconds, and then immediately cooled down once the motion stopped,” Ortega-Arroyo says. “And in one sample, we saw the fault move by about 100 microns, which implies slip velocities essentially about 10 meters per second. It moves very fast, though it doesn’t last very long.”The researchers suspect that similar processes play out in actual, kilometer-scale quakes.“Our experiments offer an integrated approach that provides one of the most complete views of the physics of earthquake-like ruptures in rocks to date,” Peč says. “This will provide clues on how to improve our current earthquake models and natural hazard mitigation.”This research was supported, in part, by the National Science Foundation. More

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    in Security

    J-WAFS welcomes Daniela Giardina as new executive director

    The Abdul Latif Jameel Water and Food Systems Lab (J-WAFS) announced that Daniela Giardina has been named the new J-WAFS executive director. Giardina stepped into the role at the start of the fall semester, replacing founding executive director Renee J. Robins ’83, who is retiring after leading the program since its launch in 2014.“Daniela brings a deep background in water and food security, along with excellent management and leadership skills,” says Robins. “Since I first met her nearly 10 years ago, I have been impressed with her commitment to working on global water and food challenges through research and innovation. I am so happy to know that I will be leaving J-WAFS in her experienced and capable hands.”A decade of impactJ-WAFS fuels research, innovation, and collaboration to solve global water and food systems challenges. The mission of J-WAFS is to ensure safe and resilient supplies of water and food to meet the local and global needs of a dramatically growing population on a rapidly changing planet. J-WAFS funding opportunities are open to researchers in every MIT department, lab, and center, spanning all disciplines. Supported research projects include those involving engineering, science, technology, business, social science, economics, architecture, urban planning, and more. J-WAFS research and related activities include early-stage projects, sponsored research, commercialization efforts, student activities and mentorship, events that convene local and global experts, and international-scale collaborations.The global water, food, and climate emergency makes J-WAFS’ work both timely and urgent. J-WAFS-funded researchers are achieving tangible, real-time solutions and results. Since its inception, J-WAFS has distributed nearly $26 million in grants, fellowships, and awards to the MIT community, supporting roughly 10 percent of MIT’s faculty and 300 students, postdocs, and research staff from 40 MIT departments, labs, and centers. J-WAFS grants have also helped researchers launch 13 startups and receive over $25 million in follow-on funding.Giardina joins J-WAFS at an exciting time in the program’s history; in the spring, J-WAFS celebrated 10 years of supporting water and food research at MIT. The milestone was commemorated at a special event attended by MIT leadership, researchers, students, staff, donors, and others in the J-WAFS community. As J-WAFS enters its second decade, interest and opportunities for water and food research continue to grow. “I am truly honored to join J-WAFS at such a pivotal moment,” Giardina says.Putting research into real-world practiceGiardina has nearly two decades of experience working with nongovernmental organizations and research institutions on humanitarian and development projects. Her work has taken her to Africa, Latin America, the Caribbean, and Central and Southeast Asia, where she has focused on water and food security projects. She has conducted technical trainings and assessments, and managed projects from design to implementation, including monitoring and evaluation.Giardina comes to MIT from Oxfam America, where she directed disaster risk reduction and climate resilience initiatives, working on approaches to strengthen local leadership, community-based disaster risk reduction, and anticipatory action. Her role at Oxfam required her to oversee multimillion-dollar initiatives, supervising international teams, managing complex donor portfolios, and ensuring rigorous monitoring across programs. She connected hands-on research with community-oriented implementation, for example, by partnering with MIT’s D-Lab to launch an innovation lab in rural El Salvador. Her experience will help guide J-WAFS as it pursues impactful research that will make a difference on the ground.Beyond program delivery, Giardina has played a strategic leadership role in shaping Oxfam’s global disaster risk reduction strategy and representing the organization at high-level U.N. and academic forums. She is multilingual and adept at building partnerships across cultures, having worked with governments, funders, and community-based organizations to strengthen resilience and advance equitable access to water and food.Giardina holds a PhD in sustainable development from the University of Brescia in Italy. She also holds a master’s degree in environmental engineering from the Politecnico of Milan in Italy and is a chartered engineer since 2005 (equivalent to a professional engineering license in the United States). She also serves as vice chair of the Boston Network for International Development, a nonprofit that connects and strengthens Boston’s global development community.“I have seen first-hand how climate change, misuse of resources, and inequality are undermining water and food security around the globe,” says Giardina. “What particularly excites me about J-WAFS is its interdisciplinary approach in facilitating meaningful partnerships to solve many of these problems through research and innovation. I am eager to help expand J-WAFS’ impact by strengthening existing programs, developing new initiatives, and building strategic partnerships that translate MIT’s groundbreaking research into real-world solutions,” she adds.A legacy of leadershipRenee Robins will retire with over 23 years of service to MIT. Years before joining the staff, she graduated from MIT with dual bachelor’s degrees in both biology and humanities/anthropology. She then went on to earn a master’s degree in public policy from Carnegie Mellon University. In 1998, she came back to MIT to serve in various roles across campus, including with the Cambridge MIT Institute, the MIT Portugal Program, the Mexico City Program, the Program on Emerging Technologies, and the Technology and Policy Program. She also worked at the Harvard Graduate School of Education, where she managed a $15 million research program as it scaled from implementation in one public school district to 59 schools in seven districts across North Carolina.In late 2014, Robins joined J-WAFS as its founding executive director, playing a pivotal role in building it from the ground up and expanding the team to six full-time professionals. She worked closely with J-WAFS founding director Professor John H. Lienhard V to develop and implement funding initiatives, develop, and shepherd corporate-sponsored research partnerships, and mentor students in the Water Club and Food and Agriculture Club, as well as numerous other students. Throughout the years, Robins has inspired a diverse range of researchers to consider how their capabilities and expertise can be applied to water and food challenges. Perhaps most importantly, her leadership has helped cultivate a vibrant community, bringing together faculty, students, and research staff to be exposed to unfamiliar problems and new methodologies, to explore how their expertise might be applied, to learn from one another, and to collaborate.At the J-WAFS 10th anniversary event in May, Robins noted, “it has been a true privilege to work alongside John Lienhard, our dedicated staff, and so many others. It’s been particularly rewarding to see the growth of an MIT network of water and food researchers that J-WAFS has nurtured, which grew out of those few individuals who saw themselves to be working in solitude on these critical challenges.”Lienhard also spoke, thanking Robins by saying she “was my primary partner in building J-WAFS and [she is] a strong leader and strategic thinker.”Not only is Robins a respected leader, she is also a dear friend to so many at MIT and beyond. In 2021, she was recognized for her outstanding leadership and commitment to J-WAFS and the Institute with an MIT Infinite Mile Award in the area of the Offices of the Provost and Vice President for Research.Outside of MIT, Robins has served on the Board of Trustees for the International Honors Program — a comparative multi-site study abroad program, where she previously studied comparative culture and anthropology in seven countries around the world. Robins has also acted as an independent consultant, including work on program design and strategy around the launch of the Université Mohammed VI Polytechnique in Morocco.Continuing the tradition of excellenceGiardina will report to J-WAFS director Rohit Karnik, the Abdul Latif Jameel Professor of Water and Food in the MIT Department of Mechanical Engineering. Karnik was named the director of J-WAFS in January, succeeding John Lienhard, who retired earlier this year.As executive director, Giardina will be instrumental in driving J-WAFS’ mission and impact. She will work with Karnik to help shape J-WAFS’ programs, long-term strategy, and goals. She will also be responsible for supervising J-WAFS staff, managing grant administration, and overseeing and advising on financial decisions.“I am very grateful to John and Renee, who have helped to establish J-WAFS as the Institute’s preeminent program for water and food research and significantly expanded MIT’s research efforts and impact in the water and food space,” says Karnik. “I am confident that with Daniela as executive director, J-WAFS will continue in the tradition of excellence that Renee and John put into place, as we move into the program’s second decade,” he notes.Giardina adds, “I am inspired by the lab’s legacy of Renee Robins and Professor Lienhard, and I look forward to working with Professor Karnik and the J-WAFS staff.” More

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    in Environment

    Simpler models can outperform deep learning at climate prediction

    Environmental scientists are increasingly using enormous artificial intelligence models to make predictions about changes in weather and climate, but a new study by MIT researchers shows that bigger models are not always better.The team demonstrates that, in certain climate scenarios, much simpler, physics-based models can generate more accurate predictions than state-of-the-art deep-learning models.Their analysis also reveals that a benchmarking technique commonly used to evaluate machine-learning techniques for climate predictions can be distorted by natural variations in the data, like fluctuations in weather patterns. This could lead someone to believe a deep-learning model makes more accurate predictions when that is not the case.The researchers developed a more robust way of evaluating these techniques, which shows that, while simple models are more accurate when estimating regional surface temperatures, deep-learning approaches can be the best choice for estimating local rainfall.They used these results to enhance a simulation tool known as a climate emulator, which can rapidly simulate the effect of human activities onto a future climate.The researchers see their work as a “cautionary tale” about the risk of deploying large AI models for climate science. While deep-learning models have shown incredible success in domains such as natural language, climate science contains a proven set of physical laws and approximations, and the challenge becomes how to incorporate those into AI models.“We are trying to develop models that are going to be useful and relevant for the kinds of things that decision-makers need going forward when making climate policy choices. While it might be attractive to use the latest, big-picture machine-learning model on a climate problem, what this study shows is that stepping back and really thinking about the problem fundamentals is important and useful,” says study senior author Noelle Selin, a professor in the MIT Institute for Data, Systems, and Society (IDSS) and the Department of Earth, Atmospheric and Planetary Sciences (EAPS).Selin’s co-authors are lead author Björn Lütjens, a former EAPS postdoc who is now a research scientist at IBM Research; senior author Raffaele Ferrari, the Cecil and Ida Green Professor of Oceanography in EAPS and co-director of the Lorenz Center; and Duncan Watson-Parris, assistant professor at the University of California at San Diego. Selin and Ferrari are also co-principal investigators of the Bringing Computation to the Climate Challenge project, out of which this research emerged. The paper appears today in the Journal of Advances in Modeling Earth Systems.Comparing emulatorsBecause the Earth’s climate is so complex, running a state-of-the-art climate model to predict how pollution levels will impact environmental factors like temperature can take weeks on the world’s most powerful supercomputers.Scientists often create climate emulators, simpler approximations of a state-of-the art climate model, which are faster and more accessible. A policymaker could use a climate emulator to see how alternative assumptions on greenhouse gas emissions would affect future temperatures, helping them develop regulations.But an emulator isn’t very useful if it makes inaccurate predictions about the local impacts of climate change. While deep learning has become increasingly popular for emulation, few studies have explored whether these models perform better than tried-and-true approaches.The MIT researchers performed such a study. They compared a traditional technique called linear pattern scaling (LPS) with a deep-learning model using a common benchmark dataset for evaluating climate emulators.Their results showed that LPS outperformed deep-learning models on predicting nearly all parameters they tested, including temperature and precipitation.“Large AI methods are very appealing to scientists, but they rarely solve a completely new problem, so implementing an existing solution first is necessary to find out whether the complex machine-learning approach actually improves upon it,” says Lütjens.Some initial results seemed to fly in the face of the researchers’ domain knowledge. The powerful deep-learning model should have been more accurate when making predictions about precipitation, since those data don’t follow a linear pattern.They found that the high amount of natural variability in climate model runs can cause the deep learning model to perform poorly on unpredictable long-term oscillations, like El Niño/La Niña. This skews the benchmarking scores in favor of LPS, which averages out those oscillations.Constructing a new evaluationFrom there, the researchers constructed a new evaluation with more data that address natural climate variability. With this new evaluation, the deep-learning model performed slightly better than LPS for local precipitation, but LPS was still more accurate for temperature predictions.“It is important to use the modeling tool that is right for the problem, but in order to do that you also have to set up the problem the right way in the first place,” Selin says.Based on these results, the researchers incorporated LPS into a climate emulation platform to predict local temperature changes in different emission scenarios.“We are not advocating that LPS should always be the goal. It still has limitations. For instance, LPS doesn’t predict variability or extreme weather events,” Ferrari adds.Rather, they hope their results emphasize the need to develop better benchmarking techniques, which could provide a fuller picture of which climate emulation technique is best suited for a particular situation.“With an improved climate emulation benchmark, we could use more complex machine-learning methods to explore problems that are currently very hard to address, like the impacts of aerosols or estimations of extreme precipitation,” Lütjens says.Ultimately, more accurate benchmarking techniques will help ensure policymakers are making decisions based on the best available information.The researchers hope others build on their analysis, perhaps by studying additional improvements to climate emulation methods and benchmarks. Such research could explore impact-oriented metrics like drought indicators and wildfire risks, or new variables like regional wind speeds.This research is funded, in part, by Schmidt Sciences, LLC, and is part of the MIT Climate Grand Challenges team for “Bringing Computation to the Climate Challenge.” More

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    in Environment

    Study links rising temperatures and declining moods

    Rising global temperatures affect human activity in many ways. Now, a new study illuminates an important dimension of the problem: Very hot days are associated with more negative moods, as shown by a large-scale look at social media postings.Overall, the study examines 1.2 billion social media posts from 157 countries over the span of a year. The research finds that when the temperature rises above 95 degrees Fahrenheit, or 35 degrees Celsius, expressed sentiments become about 25 percent more negative in lower-income countries and about 8 percent more negative in better-off countries. Extreme heat affects people emotionally, not just physically.“Our study reveals that rising temperatures don’t just threaten physical health or economic productivity — they also affect how people feel, every day, all over the world,” says Siqi Zheng, a professor in MIT’s Department of Urban Studies and Planning (DUSP) and Center for Real Estate (CRE), and co-author of a new paper detailing the results. “This work opens up a new frontier in understanding how climate stress is shaping human well-being at a planetary scale.”The paper, “Unequal Impacts of Rising Temperatures on Global Human Sentiment,” is published today in the journal One Earth. The authors are Jianghao Wang, of the Chinese Academy of Sciences; Nicolas Guetta-Jeanrenaud SM ’22, a graduate of MIT’s Technology and Policy Program (TPP) and Institute for Data, Systems, and Society; Juan Palacios, a visiting assistant professor at MIT’s Sustainable Urbanization Lab (SUL) and an assistant professor Maastricht University; Yichun Fan, of SUL and Duke University; Devika Kakkar, of Harvard University; Nick Obradovich, of SUL and the Laureate Institute for Brain Research in Tulsa; and Zheng, who is the STL Champion Professor of Urban and Real Estate Sustainability at CRE and DUSP. Zheng is also the faculty director of CRE and founded the Sustainable Urbanization Lab in 2019.Social media as a windowTo conduct the study, the researchers evaluated 1.2 billion posts from the social media platforms Twitter and Weibo, all of which appeared in 2019. They used a natural language processing technique called Bidirectional Encoder Representations from Transformers (BERT), to analyze 65 languages across the 157 countries in the study.Each social media post was given a sentiment rating from 0.0 (for very negative posts) to 1.0 (for very positive posts). The posts were then aggregated geographically to 2,988 locations and evaluated in correlation with area weather. From this method, the researchers could then deduce the connection between extreme temperatures and expressed sentiment.“Social media data provides us with an unprecedented window into human emotions across cultures and continents,” Wang says. “This approach allows us to measure emotional impacts of climate change at a scale that traditional surveys simply cannot achieve, giving us real-time insights into how temperature affects human sentiment worldwide.”To assess the effects of temperatures on sentiment in higher-income and middle-to-lower-income settings, the scholars also used a World Bank cutoff level of gross national income per-capita annual income of $13,845, finding that in places with incomes below that, the effects of heat on mood were triple those found in economically more robust settings.“Thanks to the global coverage of our data, we find that people in low- and middle-income countries experience sentiment declines from extreme heat that are three times greater than those in high-income countries,” Fan says. “This underscores the importance of incorporating adaptation into future climate impact projections.”In the long runUsing long-term global climate models, and expecting some adaptation to heat, the researchers also produced a long-range estimate of the effects of extreme temperatures on sentiment by the year 2100. Extending the current findings to that time frame, they project a 2.3 percent worsening of people’s emotional well-being based on high temperatures alone by then — although that is a far-range projection.“It’s clear now, with our present study adding to findings from prior studies, that weather alters sentiment on a global scale,” Obradovich says. “And as weather and climates change, helping individuals become more resilient to shocks to their emotional states will be an important component of overall societal adaptation.”The researchers note that there are many nuances to the subject, and room for continued research in this area. For one thing, social media users are not likely to be a perfectly representative portion of the population, with young children and the elderly almost certainly using social media less than other people. However, as the researchers observe in the paper, the very young and elderly are probably particularly vulnerable to heat shocks, making the response to hot weather possible even larger than their study can capture.The research is part of the Global Sentiment project led by the MIT Sustainable Urbanization Lab, and the study’s dataset is publicly available. Zheng and other co-authors have previously investigated these dynamics using social media, although never before at this scale.“We hope this resource helps researchers, policymakers, and communities better prepare for a warming world,” Zheng says.The research was supported, in part, by Zheng’s chaired professorship research fund, and grants Wang received from the National Natural Science Foundation of China and the Chinese Academy of Sciences.  More