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    New outcomes on how silicon enables the cultivation of Panicum maximum in soil with water restriction

    Biological damage from water deficit in foragesReports on the tolerance to water deficit damage in the forage cultivars under study are scarce, especially in relation to N and C accumulation, Si effects, and physiological attributes.Pastures grown under water restriction with and without silicon showed a decreased cumulative amount of the beneficial element. However, pastures grown with or without water restriction that had received silicon had an increase in the cumulative amount of silicon (Fig. 2a,d). Carbon content decreased in pastures that had received silicon, regardless of water availability (Fig. 2b,e). Water restriction increased N content in both treatments with and without Si for both forages. Silicon fertigation only in plants with water restriction increased N content in cultivar Massai but decreased it in cultivar BRS Zuri (Fig. 2c,f).Figure 2Silicon (Si) content (a, d), carbon (C) content (b, e) and nitrogen (N) content (c, f) in the aerial part of forage plants cultivated in soil with different soil water retention capacity (WRC) (70 and 40%) absence (− Si) and in the presence of silicon fertigation (+ Si). *Significant to 5% probability by the F test. Lowercase letters show differences in relation to Si and uppercase in relation to WRC. The bars represent the standard error of the mean, n = 6.Full size imageThe present study evidenced, especially with Si addition to the crop, that water deficit in the P. maximum pasture, regardless of cultivar, significantly impairs plant growth by changing homeostasis, i.e., decreasing the C:N ratio by reducing plant C content. This induces instability in the metabolism of the crop, especially in terms of physiological processes31,53. Thus, it was clear that water deficit aggravated physiological stress in the pastures due to an increase in electrolyte leakage, followed by a decrease in Fv/Fm. In other words, photosynthetic efficiency decreased in association with lower relative water content in the plant, which reduced the growth of both P. maximum cultivars.Water deficit in both pastures with and without silicon supply decreased the C:N ratio, except in cultivar Massai, in which the omission of silicon increased this ratio. In an adequate condition of water availability, there was no difference between the absence and presence of Si in the pastures (Fig. 3a,d). Other authors report the same results for different forages, such as sugarcane53. Water deficit in the pastures did not change the C:Si ratio, regardless of Si. In pastures with or without water deficit, silicon fertigation decreased the C:Si ratio (Fig. 3b,e).Figure 3Ratio C:N (a, d), ratio C:Si (b, e) and carbon use efficiency (c, f) in the aerial part of forage plants cultivated in soil with different soil water retention capacities (WRC) (70 and 40%) %) absence (− Si) and in the presence of silicon fertigation (+ Si). *Significant at 5% probability. ns: not significant by the test F. Lowercase letters show differences in relation to Si and capitalization in relation to WRC. The bars represent the standard error of the mean, n = 6.Full size imageAlthough this species has a high capacity for dry matter accumulation because it has a high protein content54, it is sensitive to drought55. Drought damage to plant growth, is due to the loss of stoichiometric stability of nutrients56, which balances the mass of various elements between plants and their environments57.A promising alternative to mitigate water deficit damage in the pasture is the use of Si. This element plays a vital role in the physiological, metabolic, and/or functional processes of plants58 when properly absorbed by the crop. The present study evidences the high capacity of the pastures under study to absorb Si when under water restriction. This is because P. maximum is a Si-accumulating species (leaf Si content > 10 g kg−1), which means that these plants might have specific efficient carriers in the process of Si absorption (monosilicic acid)37,59.Biological benefits of silicon in mitigating water deficit in forageThe high Si absorption by the pastures was important because it was enough to change C and N contents in the pastures under water deficit, and consequently the C:N ratio. However, Si absorption varied depending on the cultivar. In cultivar Massai, the absorption of this element decreased due to an increase in N content, while the opposite occurred in cultivar BRS Zuri. This may have occurred because cultivar Massai has higher N absorption efficiency than BRS Zuri. One cultivar or species may have greater absorption efficiency than another because it has a more efficient nitrogen transporter. In other words, it has better kinetic indexes, such as low KM and minimum concentration, which is governed by genetics31.The decrease in the C:Si ratio in plants grown under water restriction is a result of Si supply, which increased the absorption of this element and decreased C content in both pastures. Long et al.28 also reported the importance of silicon in elementary stoichiometry in a study with banana trees under water deficit.The benefit of stoichiometric homeostasis reflected the high metabolic efficiency of C, that is, Si significantly increased C use efficiency in P. maximum pastures under water restriction (Fig. 3b,e). Other authors report this effect in Brachiaria spp. pastures under drought25 and in sugarcane plants without water stress60.Carbon use efficiency (CUE) decreased in pastures with water restriction without silicon application. However, this variable increased in pastures where this element had been applied. In pastures under adequate water availability, silicon fertigation also increased CUE (Fig. 3c,f). Sugarcane plants under water deficit also showed decreased carbon use efficiency53. This increase in C use efficiency (Fig. 3c,f) by Si may have occurred in both pastures because there was a clear decrease in C content in plants grown under water restriction (Fig. 2b,e).Hao et al.29 reported similar results in native grass species, in which high Si content correlated with low levels of C. This decrease in C content may have occurred because when absorbing the beneficial element, the plant applies an “exchange strategy” to C, particularly in cell wall components such as cellulose. This is because the energy cost of including Si in the carbon chain is lower than that of including C itself61. This strategy thus improves the homeostasis of resistance to water deficiency in pastures. Reports indicate that the increase in Si in plant tissues may decrease lignin synthesis in the cell wall, which has a high energy cost62; The plant uses a “low cost strategy” when occupying binding sites between cell wall components, providing similar structural resistance to that of lignin63.These findings may support the promising role of Si in pasture management. This was evidenced from the effect of Si on elemental stoichiometry homeostasis in both forages grown under water restriction, which favored vital physiological processes by increasing the relative water content of the plant by approximately 14% (Fig. 4a,d). However, the effect of Si on the stoichiometric homeostasis of C might have induced energy savings in the plant, which is critical under water deficit conditions. Plants under water deficit have a limitation in the CO2 assimilation rate accompanied by an increase in the activity of another sink of absorbed energy, for example, photorespiration30. Studies on other crops confirm this finding, indicating a benefit of Si on stoichiometric homeostasis in plants under water deficit. Some examples are the studies of Rocha et al.25 on pasture, and Oliveira Filho et al.26 and Teixeira et al.64 on sugarcane.Figure 4Relative water content (a, d), electrolyte leakage index (b, e) and Total phenolic content (c, f) of forage plants cultivated in soil with different soil water retention capacities (WRC) (70 and 40%) absence (− Si) and in the presence of silicon fertigation (+ Si). *Significant at 5% probability. ns: not significant by the test F. Lowercase letters show differences with respect to Si and uppercase in relation to WRC. The bars represent the standard error of the mean, n = 6.Full size imagePastures under water deficit without silicon fertigation showed decreased relative water content in the plants. On the other hand, silicon fertigation increased the relative water content of forages under water deficit (Fig. 4a,d). Wang et al.65 performed a review to elucidate the effect of silicon on plant water transport processes. The authors indicated that silica deposition on leaf cuticle and stomata decreases water loss from transpiration under water deficit stress. However, accumulating evidence suggest that silicon maintains leaf water content not by reducing water loss, but rather through osmotic adjustments, enhancing water transport and uptake. According to the same authors, enhancement of stem water transport efficiency by silicon is due to silica depositing in the cell wall of vessel tubes, avoiding collapse and embolism.The physiological improvement promoted by Si in attenuating water deficit in pastures probably correlates with the reduction of oxidative stress. In this sense, cell electrolyte leakage decreased (Fig. 4b,e), from the increase of the non-enzymatic antioxidant compound in both forages (Fig. 4c,f) or from the activity of antioxidant enzymes66. This reduces reactive oxygen species, which are common in plants under water deficit67.Water deficiency affected the production of phenolic compounds depending on the cultivar. In Massai, this variable only increased with Si supply; in BRS Zuri, however, it decreased regardless of Si. Plants with silicon fertigation had increased phenolic compound content in pastures under both water availability conditions (Fig. 4c,f). Other authors have reported this effect of Si in increasing phenolic compounds in crops such as faba bean68 and sugar beet69. This supports the hypothesis that Si can attenuate the oxidative stress caused by water deficit by increasing the non-enzymatic antioxidant compound.Exogenous application of Si protects the photosynthetic pigments from oxidative damage by reducing membrane lipid peroxidation. In peanut, this type of application either maintained or reduced H2O268. Another effect of Si that demonstrates the attenuation of oxidative stress in pastures under water deficit was the increase in Fv/Fm; in other words, it favored photosynthetic efficiency. In both pastures, the condition of water restriction without silicon supply decreased the quantum efficiency of PSII (Fv/Fm). However, the supply of silicon in pastures, regardless of water condition, increased the photochemical efficiency of PSII (Fig. 5a,c).Figure 5Quantum efficiency of photosystem II (Fv/Fm) (a, c) and total chlorophyll index (Chl a + b) (b, d) of forage plants grown in soil with different soil water retention capacities (WRC) (70 and 40%) absence (− Si) and in the presence of silicon fertigation (+ Si). *Significant at 5% probability. ns: not significant by the test F. Lowercase letters show differences in relation to Si and capitalization in relation to WRC. The bars represent the standard error of the mean, n = 6.Full size imageThe protection of photosynthetic pigments by Si is also indicative of decreased oxidative stress58. The present study evidenced this situation, as the beneficial element increased the total chlorophyll index in both forages under water deficit (Fig. 5b,d). Wang et al.69 reported that Si delays the degradation of chlorophyll–protein complexes, as the element alters the protein components of the thylakoid, thus optimizing the light collection and stability of PSI. Another benefit of Si would be an increase in osmoprotection as a result of the greater accumulation of metabolites, mainly sugars and sugar alcohols (talose, mannose, fructose, sucrose, cellobiose, trehalose, pinitol, and myo-inositol) and amino acids (glutamic acid, serine, histidine, threonine, tyrosine, valine, isoleucine, and leucine), as seen in peanut plants68.Si benefit on forage productivity under water deficitWater restriction with or without silicon supply decreased the height of both pastures, and silicon application in both water regimes increased plant height (Fig. 6a,d). Water restriction with or without silicon supply decreased the number of tillers in both pastures, except for the cultivar BRS Zuri that had received Si. Silicon application increased the number of tillers in both pastures in both water regimes, except for the cultivar Massai without water restriction (Fig. 6b,e). The dry weight of both pastures decreased under water deficit, regardless of silicon. However, the dry matter of the pastures increased after Si application, with or without water restriction (Fig. 6c,f).Figure 6Plant height (a, d), number of tillers (b, e) and dry matter mass (c, f) of forage plants grown in soil with different soil water retention capacity (WRC) (70 and 40%) absence (− Si) and in the presence of silicon fertigation (+ Si). ns: not significant by the test F. Lowercase letters show differences in relation to Si and capitalization in relation to WRC. The bars represent the standard error of the mean, n = 6.Full size imageThus, the mitigating effects of Si on the physiological processes of both pastures grown under water deficit were responsible for increasing forage growth by promoting an increase of 12% in plant height and 31% in the number of tillers, which is one of the main components of pasture production. This resulted in a 25% increase in dry matter accumulation in relation to the pasture without Si (Fig. 7). Other authors have also reported the mitigating effect of Si on water deficit with a view to increasing plant growth in forage crops70 and other crops like wheat71 and rice72.Figure 7Figure of a forage plant in the condition of water deficit in the absence (− Si) and in the presence of silicon fertigation (+ Si) and a summary of its beneficial in the effects of the plant growth.Full size imageThe present study showed that the effect of Si on the attenuation of drought is not restricted only to physiological aspects involving increased plant water content and photosynthetic or biochemical efficiency. It also regulates elemental stoichiometric homeostasis as discussed above, confirming the biological strategy reported by Hao et al.29 in other forage grasses. Our study indicates that the line of research on the relationship between water deficit and Si in elementary stoichiometry is promising and should advance towards a better understanding of the multiple effects of this beneficial element on the plant.Animal production depends on the amount of biomass produced for grazing. The report of Habermann et al.73 has indicated that climate changes, such as droughts, are threatening pasture production and have a negative impact on animal and protein production. To solve this, the present research serves as a reference for Si fertigation management during the growth of P. maximum. This management consists of a sustainable alternative to improve production with greater nutritional balance even under soil water restriction, favoring water use efficiency in cultivation (Fig. 8). Moreover, Si has long-term potential to reduce the occurrence of droughts, favoring the sustainability of ecosystems. This is because the use of the beneficial element in the soil does not produce greenhouse gases, without negative impacts on the production environment74,75.Figure 8Benefits of Si in elementary stoichiometry and its relationship with physiological and biochemical aspects.Full size imageFuture perspectivesPeatlands and other terrestrial ecosystems represent large reservoirs and filters for Si, controlling Si transfer to the oceans. Land use change during the last 250 years has decreased soil Si availability by increasing export and decreasing Si storage due to higher erosion and a decrease in potentially Si-accumulating plants. Moreover, it has led to a twofold to threefold decrease of the base flow delivery of Si76. This raises concern over forage crops, reinforcing the need for silicate fertilization to explain the response of these species to the application of this element. Future perspectives would focuse on the benefits of Si in elementary stoichiometry and its relationship with physiological and biochemical aspects.Studies should use, other forage species, especially dicotyledons sensitive to water deficit, which have different mechanisms for Si absorption. This will allow a better understanding of whether the Si mechanisms that attenuate drought in monocotyledons also occur in dicotyledons. More

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    Olfactory responses of Trissolcus mitsukurii to plants attacked by target and non-target stink bugs suggest low risk for biological control

    1.Kenis, M., Hurley, B. P., Hajek, A. E. & Cock, M. J. W. Classical biological control of insect pests of trees: Facts and figures. Biol. Invasions 19, 3401–3417 (2017).
    Google Scholar 
    2.Hoddle, M. S. Restoring balance: Using exotic species to control invasive exotic species. Conserv. Biol. 18, 38–49 (2004).
    Google Scholar 
    3.van Lenteren, J. C. & Loomans, A. J. M. Environmental risk assessment: Methods for comprehensive evaluation and quick scan. In Environmental Impact of Invertebrates for Biological Control of Arthropods: Methods and Risk Assessment Vol. 10 (eds Bigler, F. et al.) 254–272 (CABI Publishing, 2006).
    Google Scholar 
    4.Loomans, A. J. M. Every generalist biological control agent requires a special risk assessment. Biocontrol 66, 23–35 (2021).
    Google Scholar 
    5.Mason, P. G., Everatt, M. J., Loomans, A. J. M. & Collatz, J. Harmonizing the regulation of invertebrate biological control agents in the EPPO region: Using the NAPPO region as a model. EPPO Bull. 47, 79–90 (2017).
    Google Scholar 
    6.Sabbatini-Peverieri, G. et al. Combining physiological host range, behavior and host characteristics for predictive risk analysis of Trissolcus japonicus. J. Pest Sci. 94, 1003–1016 (2021).
    Google Scholar 
    7.Abram, P. K., Labbe, R. M. & Mason, P. G. Ranking the host range of biological control agents with quantitative metrics of taxonomic specificity. Biol. Control 152, 104427 (2021).CAS 

    Google Scholar 
    8.Haye, T. et al. Fundamental host range of Trissolcus japonicus in Europe. J. Pest Sci. 93, 171–182 (2020).
    Google Scholar 
    9.Hilker, M. & Meiners, T. Chemoecology of Insect Eggs and Egg Deposition (Blackwell, 2008).
    Google Scholar 
    10.Meiners, T. & Peri, E. Chemical ecology of insect parasitoids: Essential elements for developing effective biological control programmes. In Chemical Ecology of Insect Parasitoids (eds Wajnberg, E. & Colazza, S.) 191–224 (Wiley-Blackwell, 2013).
    Google Scholar 
    11.Conti, E. & Colazza, S. Chemical ecology of egg parasitoids associated with true bugs. Psyche 2012, 651015 (2012).
    Google Scholar 
    12.Desurmont, G. A. et al. Alien interference: Disruption of infochemical networks by invasive insect herbivores. Plant Cell Environ. 37, 1854–1865 (2014).PubMed 

    Google Scholar 
    13.Martorana, L. et al. An invasive insect herbivore disrupts plant volatile-mediated tritrophic signalling. J. Pest Sci. 90, 1079–1085 (2017).
    Google Scholar 
    14.van Driesche, R. G. & Murray, T. J. Parameters used in laboratory host range tests. In Assessing Host Ranges of Parasitoids and Predators Used for Classical Biological Control: A Guide to Best Practice (eds van Driesche, R. & Reardon, R.) 55–67 (US Department Agriculture Forest Health Technology Enterprise Team, 2004).
    Google Scholar 
    15.Conti, E., Salerno, G., Bin, F. & Vinson, S. B. The role of host semiochemicals in parasitoid specificity: A case study with Trissolcus brochymenae and Trissolcus simoni on pentatomid bugs. Biol. Control 29, 435–444 (2004).CAS 

    Google Scholar 
    16.Ferracini, C. et al. Non-target host risk assessment for the parasitoid Torymus sinensis. Biocontrol 60, 583–594 (2015).
    Google Scholar 
    17.Avila, G. A., Withers, T. M. & Holwell, G. I. Laboratory odour-specificity testing of Cotesia urabae to assess potential risks to non-target species. Biocontrol 61, 365–377 (2016).
    Google Scholar 
    18.Wyckhuys, K. A. G. & Heimpel, G. E. Response of the soybean aphid parasitoid Binodoxys communis to olfactory cues from target and non-target host-plant complexes. Entomol. Exp. Appl. 123, 149–158 (2007).
    Google Scholar 
    19.Gohole, L. S., Overholt, W. A., Khan, Z. R. & Vet, L. E. M. Role of volatiles emitted by host and non-host plants in the foraging behaviour of Dentichasmias busseolae, a pupal parasitoid of the spotted stemborer Chilo partellus. Entomol. Exp. Appl. 107, 1–9 (2003).CAS 

    Google Scholar 
    20.Leskey, T. C. & Nielsen, A. L. Impact of the invasive Brown Marmorated Stink Bug in North America and Europe: History, biology, ecology, and management. Annu. Rev. Entomol. 63, 599–618 (2018).CAS 
    PubMed 

    Google Scholar 
    21.Nixon, L. J. et al. Volatile release, mobility, and mortality of diapausing Halyomorpha halys during simulated shipping movements and temperature changes. J. Pest Sci. 92, 633–641 (2019).
    Google Scholar 
    22.Hoebeke, E. R. & Carter, M. E. Halyomorpha halys (Stål) (Heteroptera: Pentatomidae): A polyphagous plant pest from Asia newly detected in North America. Proc. Entomol. Soc. Washingt. 105, 225–237 (2003).
    Google Scholar 
    23.Haye, T., Abdallah, S., Gariepy, T. & Wyniger, D. Phenology, life table analysis and temperature requirements of the invasive brown marmorated stink bug, Halyomorpha halys, Europe. J. Pest Sci. 87, 407–418 (2014).
    Google Scholar 
    24.Maistrello, L. et al. Tracking the spread of sneaking aliens by integrating crowdsourcing and spatial modeling: The Italian invasion of Halyomorpha halys. Bioscience 68, 979–989 (2018).
    Google Scholar 
    25.Bariselli, M., Bugiani, R. & Maistrello, L. Distribution and damage caused by Halyomorpha halys in Italy. EPPO Bull. 46, 332–334 (2016).
    Google Scholar 
    26.Rot, M. et al. Native and non-native egg parasitoids associated with brown marmorated stink bug (Halyomorpha halys [stål, 1855]; Hemiptera: Pentatomidae) in western Slovenia. Insects 12, 505 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    27.Conti, E. et al. Biological control of invasive stink bugs: Review of global state and future prospects. Entomol. Exp. Appl. 169, 28–51 (2021).
    Google Scholar 
    28.Zapponi, L. et al. Assessing the distribution of exotic egg parasitoids of Halyomorpha halys in Europe with a large-scale monitoring program. Insects 12, 316 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    29.Zhang, J. et al. Seasonal parasitism and host specificity of Trissolcus japonicus in northern China. J. Pest Sci. 90, 1127–1141 (2017).ADS 

    Google Scholar 
    30.Yang, Z. Q., Yao, Y. X., Qiu, L. F. & Li, Z. X. A new species of Trissolcus (Hymenoptera: Scelionidae) parasitizing eggs of Halyomorpha halys (Heteroptera: Pentatomidae) in China with comments on its biology. Ann. Entomol. Soc. Am. 102, 39–47 (2009).
    Google Scholar 
    31.Abram, P. K., Talamas, E. J., Acheampong, S., Mason, P. G. & Gariepy, T. D. First detection of the samurai wasp, Trissolcus japonicus (Ashmead) (Hymenoptera, Scelionidae), Canada. J. Hymenopt. Res. 68, 29–36 (2019).
    Google Scholar 
    32.Kaser, J. M., Akotsen-Mensah, C., Talamas, E. J. & Nielsen, A. L. First Report of Trissolcus japonicus parasitizing Halyomorpha halys in North American agriculture. Florida Entomol. 101, 680–683 (2018).
    Google Scholar 
    33.Moraglio, S. T. et al. A 3-year survey on parasitism of Halyomorpha halys by egg parasitoids in northern Italy. J. Pest Sci. 93, 183–194 (2020).
    Google Scholar 
    34.Sabbatini-Peverieri, G. et al. Two Asian egg parasitoids of Halyomorpha halys (Stål) (Hemiptera, Pentatomidae) emerge in northern Italy: Trissolcus mitsukurii (Ashmead) and Trissolcus japonicus (Ashmead) (Hymenoptera, Scelionidae). J. Hymenopt. Res. 67, 37–53 (2018).
    Google Scholar 
    35.Scaccini, D. et al. An insight into the role of Trissolcus mitsukurii as biological control agent of Halyomorpha halys in Northeastern Italy. Insects 11, 306 (2020).PubMed Central 

    Google Scholar 
    36.Hokyo, N. & Kiritani, K. Two species of egg parasites as contemporaneous mortality factors in the egg population of the southern green stink bug, Nezara viridula. Jpn. J. Appl. Entomol. Zool. 7, 214–227 (1963).
    Google Scholar 
    37.Arakawa, R., Miura, M. & Fujita, M. Effects of host species on the body size, fecundity, and longevity of Trissolcus mitsukurii (Hymenoptera: Scelionidae), a solitary egg parasitoid of stink bugs. Appl. Entomol. Zool. 39, 177–181 (2004).
    Google Scholar 
    38.Arakawa, R. & Namura, Y. Effects of temperature on development of three Trissolcus spp. (Hymenoptera: Scelionidae), egg parasitoids of the brown marmorated stink bug, Halyomorpha halys (Hemiptera: Pentatomidae). Entomol. Sci. 5, 215–218 (2002).
    Google Scholar 
    39.Chen, H., Talamas, E. J. & Pang, H. Notes on the hosts of Trissolcus ashmead (Hymenoptera: Scelionidae) from China. Biodivers. Data J. 8, e53786 (2020).PubMed 
    PubMed Central 

    Google Scholar 
    40.Ryu, J. & Hirashima, Y. Taxonomic studies on the genus Trissolcus Ashmead of Japan and Korea (Hymenoptera, Scelionidae). J. Fac. Agric. Kyushu Univ. 29, 35–58 (1984).
    Google Scholar 
    41.Bout, A. et al. First detection of the adventive egg parasitoid of Halyomorpha halys (Stål) (Hemiptera: Pentatomidae) Trissolcus mitsukurii (Ashmead) (Hymenoptera: Scelionidae) in France. Insects 12, 761 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    42.Caron, V. et al. Preempting the arrival of the brown marmorated stink bug, Halyomorpha halys: Biological control options for Australia. Insects 12, 581 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    43.Giovannini, L. et al. Physiological host range of Trissolcus mitsukurii, a candidate biological control agent of Halyomorpha halys in Europe. J. Pest Sci. https://doi.org/10.1007/s10340-021-01415-x (2021).Article 

    Google Scholar 
    44.Bertoldi, V., Rondoni, G., Brodeur, J. & Conti, E. An egg parasitoid efficiently exploits cues from a coevolved host but not those from a novel host. Front. Physiol. 10, 746 (2019).PubMed 
    PubMed Central 

    Google Scholar 
    45.Colazza, S. et al. Insect oviposition induces volatile emission in herbaceous plants that attracts egg parasitoids. J. Exp. Biol. 207, 47–53 (2004).PubMed 

    Google Scholar 
    46.Tognon, R. et al. Volatiles mediating parasitism of Euschistus conspersus and Halyomorpha halys eggs by Telenomus podisi and Trissolcus erugatus. J. Chem. Ecol. 42, 1016–1027 (2016).CAS 
    PubMed 

    Google Scholar 
    47.Borges, M. & Blassioli-Moraes, M. C. The semiochemistry of Pentatomidae. In Stink Bugs: Biorational Control Based on Communication Processes 95–124 (CRC Press, 2017).48.Conti, E., Salerno, G., Leombruni, B., Frati, F. & Bin, F. Short-range allelochemicals from a plant-herbivore association: A singular case of oviposition-induced synomone for an egg parasitoid. J. Exp. Biol. 213, 3911–3919 (2010).CAS 
    PubMed 

    Google Scholar 
    49.De Clercq, P. Predaceous Stinkbugs (Pentatomidae: Asopinae). In Heteroptera of Economic Importance (eds Schaefer, C. W. & Panizzi, A. R.) 737–789 (CRC Press, 2000).
    Google Scholar 
    50.Hamilton, G. C. et al. Halyomorpha halys (Stål). In Invasive Stink Bugs and Related Species (Pentatomoidea) (ed. McPherson, J. E.) 243–292 (CRC Press, 2018).
    Google Scholar 
    51.Panizzi, A., McPherson, J., James, D., Javahery, M. & McPherson, R. Stink bugs (Pentatomidae). In Heteroptera of Economic Importance (eds Schaefer, C. & Panizzi, A.) 421–474 (CRC Press, 2000).
    Google Scholar 
    52.Rider, D. A. Family Pentatomidae. In Catalogue of the Heteroptera of the Palaearctic Region Vol. 5 (eds Aukema, B. & Rieger, C.) 233–402 (The Netherlands Entomological Society, 2006).
    Google Scholar 
    53.Milnes, J. M. & Beers, E. H. Trissolcus japonicus (Hymenoptera: Scelionidae) causes low levels of parasitism in three North American pentatomids under field conditions. J. Insect Sci. 19, 15 (2019).PubMed 
    PubMed Central 

    Google Scholar 
    54.Peiffer, M. & Felton, G. W. Insights into the saliva of the brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae). PLoS ONE 9, e88483 (2014).ADS 
    PubMed 
    PubMed Central 

    Google Scholar 
    55.Rondoni, G. et al. Vicia faba plants respond to oviposition by invasive Halyomorpha halys activating direct defences against offspring. J. Pest Sci. 91, 671–679 (2018).
    Google Scholar 
    56.Giacometti, R. et al. Early perception of stink bug damage in developing seeds of field-grown soybean induces chemical defences and reduces bug attack. Pest Manag. Sci. 72, 1585–1594 (2016).CAS 
    PubMed 

    Google Scholar 
    57.Timbó, R. V. et al. Biochemical aspects of the soybean response to herbivory injury by the brown stink bug Euschistus heros (Hemiptera: Pentatomidae). PLoS ONE 9, e109735 (2014).ADS 
    PubMed 
    PubMed Central 

    Google Scholar 
    58.Vet, L. E. M. & Dicke, M. Ecology of infochemical use by natural enemies in a tritrophic context. Annu. Rev. Entomol. 37, 141–172 (1992).
    Google Scholar 
    59.Zapponi, L. et al. Assemblage of the egg parasitoids of the invasive stink bug Halyomorpha halys: Insights on plant host associations. Insects 11, 588 (2020).PubMed Central 

    Google Scholar 
    60.Scala, M. et al. Risposte di Trissolcus mitsukurii alle tracce chimiche volatili rilasciate da Halyomorpha halys. in XXVI Italian Congress of Entomology, 7–11 June 2021, 318 (2021).61.Kiritani, K. & Hôkyo, N. Studies on the life table of the southern green stink bug, Nezara viridula. Jpn. J. Appl. Entomol. Zool. 6, 124–140 (1962).
    Google Scholar 
    62.Hokyo, N., Kiritani, K., Nakasuji, F. & Shiga, M. Comparative biology of the two Scelionid egg parasites of Nezara viridula L. (Hemiptera : Pentatomidae). Appl. Entomol. Zool. 1, 94–102 (1966).
    Google Scholar 
    63.Esquivel, J. F. et al. Nezara viridula (L.). In Invasive Stink Bugs and Related Species (Pentatomoidea) (ed. McPherson, J. E.) 351–424 (CRC Press, 2018).
    Google Scholar 
    64.Kobayashi, T. Insect pests of soybeans in Japan. Misc. Publ. Tohoku Natl. Agric. Exp. Stn. 2, 1–39 (1981).ADS 

    Google Scholar 
    65.Nakamura, K. & Numata, H. Effects of photoperiod and temperature on the induction of adult diapause in Dolycoris baccarum (L.) (Heteroptera: Pentatomidae) from Osaka and Hokkaido, Japan. Appl. Entomol. Zool. 41, 105–109 (2006).
    Google Scholar 
    66.Mahmoud, A. M. A. & Lim, U. T. Host discrimination and interspecific competition of Trissolcus nigripedius and Telenomus gifuensis (Hymenoptera: Scelionidae), sympatric parasitoids of Dolycoris baccarum (Heteroptera: Pentatomidae). Biol. Control 45, 337–343 (2008).
    Google Scholar 
    67.Lim, U.-T., Park, K.-S., Mahmoud, A. M. A. & Jung, C.-E. Areal distribution and parasitism on other soybean bugs of Trissolcus nigripedius (Hymenoptera: Scelionidae), an egg parasitoid of Dolycoris baccarum (Heteroptera: Pentatomidae). Korean J. Appl. Entomol. 46, 79–85 (2007).
    Google Scholar 
    68.Wäckers, F. L. Assessing the suitability of flowering herbs as parasitoid food sources: Flower attractiveness and nectar accessibility. Biol. Control 29, 307–314 (2004).
    Google Scholar 
    69.Gillespie, D. R. & Mcgregor, R. R. The functions of plant feeding in the omnivorous predator Dicyphus hesperus: Water places limits on predation. Ecol. Entomol. 25, 380–386 (2000).
    Google Scholar 
    70.Bouagga, S. et al. Zoophytophagous mirids provide pest control by inducing direct defences, antixenosis and attraction to parasitoids in sweet pepper plants. Pest Manag. Sci. 74, 1286–1296 (2018).CAS 
    PubMed 

    Google Scholar 
    71.Martorana, L. et al. Egg parasitoid exploitation of plant volatiles induced by single or concurrent attack of a zoophytophagous predator and an invasive phytophagous pest. Sci. Rep. 9, 18956 (2019).ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    72.Lara, J. R. et al. Physiological host range of Trissolcus japonicus in relation to Halyomorpha halys and other pentatomids from California. Biocontrol 64, 513–528 (2019).
    Google Scholar 
    73.Zhao, Q., Jiufeng, W., Wenjun, B., Guoqing, L. & Zhang, H. Synonymize Arma chinensis as Arma custos based on morphological, molecular and geographical data. Zootaxa 4455, 161–176 (2018).PubMed 

    Google Scholar 
    74.Zou, D. et al. Taxonomic and bionomic notes on Arma chinensis (Fallou) (Hemiptera: Pentatomidae: Asopinae). Zootaxa, 3382, 41–52 (2012).
    Google Scholar 
    75.Zou, D. Y. et al. A meridic diet for continuous rearing of Arma chinensis (Hemiptera: Pentatomidae: Asopinae). Biol. Control 67, 491–497 (2013).
    Google Scholar 
    76.Wu, S. et al. Egg cannibalism varies with sex, reproductive status, and egg and nymph ages in Arma custos (Hemiptera: Asopinae). Front. Ecol. Evol. 9, 3389 (2021).
    Google Scholar 
    77.Endo, J. & Numata, H. Synchronized hatching as a possible strategy to avoid sibling cannibalism in stink bugs. Behav. Ecol. Sociobiol. 74, 16 (2020).
    Google Scholar 
    78.Afsheen, S., Xia, W., Ran, L., Zhu, C. S. & Lou, Y. G. Differential attraction of parasitoids in relation to specificity of kairomones from herbivores and their by-products. Insect Sci. 15, 381–397 (2008).
    Google Scholar 
    79.Rondoni, G. et al. Native egg parasitoids recorded from the invasive Halyomorpha halys successfully exploit volatiles emitted by the plant–herbivore complex. J. Pest Sci. 90, 1087–1095 (2017).
    Google Scholar 
    80.Bertoldi, V., Rondoni, G., Peri, E., Conti, E. & Brodeur, J. Learning can be detrimental for a parasitic wasp. PLoS ONE 16, e0238336 (2021).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    81.Conti, E., Salerno, G., Bin, F., Williams, H. J. & Vinson, S. B. Chemical cues from Murgantia histrionica eliciting host location and recognition in the egg parasitoid Trissolcus brochymenae. J. Chem. Ecol. 29, 115–130 (2003).CAS 
    PubMed 

    Google Scholar 
    82.Fatouros, N. E., Dicke, M., Mumm, R., Meiners, T. & Hilker, M. Foraging behavior of egg parasitoids exploiting chemical information. Behav. Ecol. 19, 677–689 (2008).
    Google Scholar 
    83.Vinson, S. B. The general host selection behavior of parasitoid Hymenoptera and a comparison of initial strategies utilized by larvaphagous and oophagous species. Biol. Control 11, 79–96 (1998).
    Google Scholar 
    84.Michereff, M. F. F. et al. The influence of volatile semiochemicals from stink bug eggs and oviposition-damaged plants on the foraging behaviour of the egg parasitoid Telenomus podisi. Bull. Entomol. Res. 106, 663–671 (2016).CAS 
    PubMed 

    Google Scholar 
    85.Bonnemaison, L. Insect pests of crucifers and their control. Annu. Rev. Entomol. 10, 233–256 (1965).
    Google Scholar 
    86.Rondoni, G., Chierici, E., Agnelli, A. & Conti, E. Microplastics alter behavioural responses of an insect herbivore to a plant-soil system. Sci. Total Environ. 787, 147716 (2021).ADS 
    CAS 

    Google Scholar 
    87.Blumstein, D. T., Evans, C. S. & Daniels, J. C. JWatcher (Version 3, 1.0). (2006). http://www.jwatcher.ucla.edu. Accessed April 2021.88.Peri, E., Cusumano, A., Agrò, A. & Colazza, S. Behavioral response of the egg parasitoid Ooencyrtus telenomicida to host-related chemical cues in a tritrophic perspective. Biocontrol 56, 163–171 (2011).
    Google Scholar 
    89.Rondoni, G., Ielo, F., Ricci, C. & Conti, E. Behavioural and physiological responses to prey-related cues reflect higher competitiveness of invasive vs. native ladybirds. Sci. Rep. 7, 3716 (2017).ADS 
    PubMed 
    PubMed Central 

    Google Scholar 
    90.R Core Team. R: A Language and Environment for Statistical Computing. (R Foundation for Statistical Computing, 2020). https://www.R-project.org (2020). More

  • in

    Physiology can predict animal activity, exploration, and dispersal

    1.Lihoreau, M. et al. Collective foraging in spatially complex nutritional environments. Philos. Trans. R. Soc. B 372, 20160238–11 (2017).
    Google Scholar 
    2.Ron, R., Fragman-Sapir, O. & Kadmon, R. Dispersal increases ecological selection by increasing effective community size. Proc. Natl Acad. Sci. USA 115, 11280–11285 (2018).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    3.Yeakel, J. D., Gibert, J. P., Gross, T., Westley, P. A. H. & Moore, J. W. Eco-evolutionary dynamics, density-dependent dispersal and collective behaviour: implications for salmon metapopulation robustness. Philos. Trans. R. Soc. B 373, 20170018–13 (2018).
    Google Scholar 
    4.Baguette, M., Blanchet, S., Legrand, D., Stevens, V. M. & Turlure, C. Individual dispersal, landscape connectivity and ecological networks. Biol. Rev. 88, 310–326 (2013).PubMed 

    Google Scholar 
    5.Schindler, D. E., Armstrong, J. B. & Reed, T. E. The portfolio concept in ecology and evolution. Front. Ecol. Environ. 13, 257–263 (2015).
    Google Scholar 
    6.McCauley, S. J. & Mabry, K. E. Climate change, body size, and phenotype dependent dispersal. Trends Ecol. Evol. 26, 554–555 (2011).PubMed 

    Google Scholar 
    7.Kerr, J. T. Racing against change: understanding dispersal and persistence to improve species’ conservation prospects. Proc. R. Soc. B 287, 20202061–10 (2020).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    8.Clobert, J., Galliard, J. L., Cote, J., Meylan, S. & Massot, M. Informed dispersal, heterogeneity in animal dispersal syndromes and the dynamics of spatially structured populations. Ecol. Lett. 12, 197–209 (2009).PubMed 

    Google Scholar 
    9.Bowler, D. E. & Benton, T. G. Causes and consequences of animal dispersal strategies: relating individual behaviour to spatial dynamics. Biol. Rev. 80, 205–225 (2005).PubMed 

    Google Scholar 
    10.Davis, J. M. & Stamps, J. A. The effect of natal experience on habitat preferences. Trends Ecol. Evol. 19, 411–416 (2004).PubMed 

    Google Scholar 
    11.Benard, M. F. & McCauley, S. J. Integrating across life‐history stages: consequences of natal habitat effects on dispersal. Am. Nat. 171, 553–567 (2008).PubMed 

    Google Scholar 
    12.LeRoy, A. & Seebacher, F. Transgenerational effects and acclimation affect dispersal in guppies. Funct. Ecol. 32, 1819–1831 (2018).
    Google Scholar 
    13.McGhee, K. E., Barbosa, A. J., Bissell, K., Darby, N. A. & Foshee, S. Maternal stress during pregnancy affects activity, exploration and potential dispersal of daughters in an invasive fish. Anim. Behav. 171, 41–50 (2021).
    Google Scholar 
    14.Yip, E. C., Smith, D. R. & Lubin, Y. Causes of plasticity and consistency of dispersal behaviour in a group-living spider. Anim. Behav. 175, 99–109 (2021).
    Google Scholar 
    15.Nathan, R. et al. A movement ecology paradigm for unifying organismal movement research. Proc. Natl Acad. Sci. USA 105, 19052–19059 (2008).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    16.Hawkes, C. Linking movement behaviour, dispersal and population processes: is individual variation a key? J. Anim. Ecol. 78, 894–906 (2009).PubMed 

    Google Scholar 
    17.Capelli, P., Pivetta, C., Esposito, M. S. & Arber, S. Locomotor speed control circuits in the caudal brainstem. Nature 56, 465–22 (2017).
    Google Scholar 
    18.Jiang, Y. et al. Sensory trait variation contributes to biased dispersal of threespine stickleback in flowing water. J. Evol. Biol. 30, 681–695 (2017).CAS 
    PubMed 

    Google Scholar 
    19.Malishev, M. & Kramer-Schadt, S. Movement, models, and metabolism: Individual-based energy budget models as next-generation extensions for predicting animal movement outcomes across scales. Ecol. Model. 441, 109413 (2021).
    Google Scholar 
    20.Klarevas‐Irby, J. A., Wikelski, M. & Farine, D. R. Efficient movement strategies mitigate the energetic cost of dispersal. Ecol. Lett. 24, 1432–1442 (2021).PubMed 

    Google Scholar 
    21.Mathot, K. J., Dingemanse, N. J. & Nakagawa, S. The covariance between metabolic rate and behaviour varies across behaviours and thermal types: meta‐analytic insights. Biol. Rev. 94, 1056–1074 (2019).PubMed 

    Google Scholar 
    22.Killen, S. S., Marras, S., Ryan, M. R., Domenici, P. & McKenzie, D. J. A relationship between metabolic rate and risk-taking behaviour is revealed during hypoxia in juvenile European sea bass. Funct. Ecol. 26, 134–143 (2012).
    Google Scholar 
    23.Metcalfe, N. B., Leeuwen, T. E. V. & Killen, S. S. Does individual variation in metabolic phenotype predict fish behaviour and performance? J. Fish. Biol. 88, 298–321 (2016).CAS 
    PubMed 

    Google Scholar 
    24.Gordon, A. M., Homsher, E. & Regnier, M. Regulation of contraction in striated muscle. Physiol. Rev. 80, 853–924 (2000).CAS 
    PubMed 

    Google Scholar 
    25.Gundersen, K. Excitation-transcription coupling in skeletal muscle: the molecular pathways of exercise. Biol. Rev. 86, 564–600 (2011).PubMed 

    Google Scholar 
    26.Lichtwark, G. A. & Wilson, A. M. A modified Hill muscle model that predicts muscle power output and efficiency during sinusoidal length changes. J. Exp. Biol. 208, 2831–2843 (2005).CAS 
    PubMed 

    Google Scholar 
    27.Seebacher, F., Tallis, J. A. & James, R. S. The cost of muscle power production: muscle oxygen consumption per unit work increases at low temperatures in Xenopus laevis Daudin. J. Exp. Biol. 217, 1940–1945 (2014).PubMed 

    Google Scholar 
    28.Denton, R. D., Higham, T., Greenwald, K. R. & Gibbs, H. L. Locomotor endurance predicts differences in realized dispersal between sympatric sexual and unisexual salamanders. Funct. Ecol. 31, 915–926 (2017).
    Google Scholar 
    29.Eliason, E. J. et al. Differences in thermal tolerance among sockeye salmon populations. Science 332, 109–112 (2011).CAS 
    PubMed 

    Google Scholar 
    30.Jahn, M. & Seebacher, F. Cost of transport is a repeatable trait but is not determined by mitochondrial efficiency in zebrafish (Danio rerio). J. Exp. Biol. 222, jeb201400–jeb201407 (2019).PubMed 

    Google Scholar 
    31.Pettersen, A. K., Marshall, D. J. & White, C. R. Understanding variation in metabolic rate. J. Exp. Biol. 221, jeb166876 (2018).PubMed 

    Google Scholar 
    32.Svendsen, J. C., Tirsgaard, B., Cordero, G. A. & Steffensen, J. Intraspecific variation in aerobic and anaerobic locomotion: gilthead sea bream (Sparus aurata) and Trinidadian guppy (Poecilia reticulata) do not exhibit a trade-off between maximum sustained swimming speed and minimum cost of transport. Front. Physiol. 6, 43 (2017).
    Google Scholar 
    33.Seebacher, F. & Little, A. G. Plasticity of performance curves in ectotherms: individual variation modulates population responses to environmental change. Front. Physiol. 12, 733305 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    34.Freedberg, S., Urban, C. & Cunniff, B. M. Dispersal reduces interspecific competitiveness by spreading locally harmful traits. J. Evol. Biol. 34, 1477–1487 (2021).PubMed 

    Google Scholar 
    35.Ashe, A., Colot, V. & Oldroyd, B. P. How does epigenetics influence the course of evolution? Philos. Trans. R. Soc. B 376, 20200111 (2021).CAS 

    Google Scholar 
    36.Hardie, D. C. & Hutchings, J. A. Evolutionary ecology at the extremes of species ranges. Environ. Rev. 18, 1–20 (2010).
    Google Scholar 
    37.Charmantier, A., Doutrelant, C., Dubuc‐Messier, G., Fargevieille, A. & Szulkin, M. Mediterranean blue tits as a case study of local adaptation. Evol. Appl. 9, 135–152 (2016).PubMed 

    Google Scholar 
    38.Rohr, J. R. & Cohen, J. M. Understanding how temperature shifts could impact infectious disease. PLoS Biol. 18, e3000938 (2020).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    39.Seebacher, F. & Krause, J. Physiological mechanisms underlying animal social behaviour. Philos. Trans. R. Soc. B 372, 20160231–20160238 (2017).
    Google Scholar 
    40.Avaria-Llautureo, J. et al. Historical warming consistently decreased size, dispersal and speciation rate of fish. Nat. Clim. Change 11, 787–793 (2021).
    Google Scholar 
    41.Radinger, J. et al. The future distribution of river fish: the complex interplay of climate and land use changes, species dispersal and movement barriers. Glob. Chan. Biol. 23, 4970–4986 (2017).
    Google Scholar 
    42.Pörtner, H.-O. & Knust, R. Climate change affects marine fishes through the oxygen limitation of thermal tolerance. Science 315, 95–97 (2007).PubMed 

    Google Scholar 
    43.Husak, J. F. Measuring selection on physiology in the wild and Manipulating phenotypes (in terrestrial nonhuman vertebrates). Compr. Physiol. 6, 63–85 (2016).
    Google Scholar 
    44.Hostrup, M. & Bangsbo, J. Limitations in intense exercise performance of athletes—effect of speed endurance training on ion handling and fatigue development. J. Physiol. 595, 2897–2913 (2017).CAS 
    PubMed 

    Google Scholar 
    45.Reale, D. et al. Personality and the emergence of the pace-of-life syndrome concept at the population level. Philos. Trans. R. Soc. B 365, 4051–4063 (2010).
    Google Scholar 
    46.Auer, S. K. et al. Metabolic rate interacts with resource availability to determine individual variation in microhabitat use in the wild. Am. Nat. 196, 132–144 (2020).PubMed 

    Google Scholar 
    47.Fewell, J. H. & Harrison, J. F. Scaling of work and energy use in social insect colonies. Behav. Ecol. Sociobiol. 70, 1047–1061 (2016).
    Google Scholar 
    48.LeRoy, A., Mazué, G. P. F., Metcalfe, N. B. & Seebacher, F. Diet and temperature modify the relationship between energy use and ATP production to influence behavior in zebrafish (Danio rerio). Ecol. Evol. 11, 9791–9803 (2021).
    Google Scholar 
    49.Alcaraz, G. & García-Cabello, K. N. Feeding and metabolic compensations in response to different foraging costs. Hydrobiologia 787, 217–227 (2017).
    Google Scholar 
    50.Boratyński, Z., Szyrmer, M. & Koteja, P. The metabolic performance predicts home range size of bank voles: a support for the behavioral–bioenergetics theory. Oecologia 193, 547–556 (2020).PubMed 

    Google Scholar 
    51.Killen, S. S., Marras, S., Steffensen, J. F. & McKenzie, D. J. Aerobic capacity influences the spatial position of individuals within fish schools. Proc. R. Soc. B 279, 357–364 (2012).PubMed 

    Google Scholar 
    52.Salin, K. et al. Differences in mitochondrial efficiency explain individual variation in growth performance. Proc. R. Soc. B 286, 20191466–20191468 (2019).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    53.Wilson, R. S. & Husak, J. F. Introduction to the symposium: Towards a general framework for predicting animal movement speeds in nature. Integr. Comp. Biol. 55, 1121–1124 (2015).PubMed 

    Google Scholar 
    54.Wheatley, R., Niehaus, A. C., Fisher, D. O. & Wilson, R. S. Ecological context and the probability of mistakes underlie speed choice. Funct. Ecol. 32, 990–1000 (2018).
    Google Scholar 
    55.Martin, G. R. Understanding bird collisions with man‐made objects: a sensory ecology approach. Ibis 153, 239–254 (2011).
    Google Scholar 
    56.Husak, J. F. & Fox, S. F. Field use of maximal sprint speed by collared lizards (Crotaphytus collaris): compensation and sexual selection. Evolution 60, 1888–1895 (2006).PubMed 

    Google Scholar 
    57.Mouchet, A. & Dingemanse, N. J. A quantitative genetics approach to validate lab- versus field-based behavior in novel environments. Behav. Ecol. 32, 903–911 (2021).
    Google Scholar 
    58.O’Connor, E. A., Cornwallis, C. K., Hasselquist, D., Nilsson, J.-Å. & Westerdahl, H. The evolution of immunity in relation to colonization and migration. Nat. Ecol. Evol. 2, 841–849 (2018).PubMed 

    Google Scholar 
    59.Du, J. et al. Dynamic regulation of mitochondrial function by glucocorticoids. Proc. Natl Acad. Sci. USA 106, 3543–3548 (2009).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    60.Jaikumar, G., Slabbekoorn, H., Sireeni, J., Schaaf, M. & Tudorache, C. The role of the glucocorticoid receptor in the regulation of diel rhythmicity. Physiol. Behav. 223, 112991 (2020).CAS 
    PubMed 

    Google Scholar 
    61.Castillo-Ramírez, L. A., Ryu, S. & Marco, R. J. D. Active behaviour during early development shapes glucocorticoid reactivity. Sci. Rep. 9, 55–59 (2019).
    Google Scholar 
    62.Bruijn, Rde & Romero, L. M. The role of glucocorticoids in the vertebrate response to weather. Gen. Comp. Endocrinol. 269, 11–32 (2018).PubMed 

    Google Scholar 
    63.Saastamoinen, M. et al. Genetics of dispersal. Biol. Rev. 93, 574–599 (2018).PubMed 

    Google Scholar 
    64.Seebacher, F., White, C. R. & Franklin, C. E. Physiological plasticity increases resilience of ectothermic animals to climate change. Nat. Clim. Change 5, 61–66 (2015).
    Google Scholar 
    65.White, C. R. et al. Geographical bias in physiological data limits predictions of global change impacts. Funct. Ecol. 35, 1572–1578 (2021).
    Google Scholar 
    66.Moher, D. et al. Preferred reporting items for systematic review and meta-analysis protocols (PRISMA-P) 2015 statement. Syst. Rev. 4, 1 (2015).PubMed 
    PubMed Central 

    Google Scholar 
    67.Ouzzani, M., Hammady, H., Fedorowicz, Z. & Elmagarmid, A. Rayyan—a web and mobile app for systematic reviews. Syst. Rev. 5, 1–10 (2016).
    Google Scholar 
    68.Debeffe, L. et al. Exploration as a key component of natal dispersal: dispersers explore more than philopatric individuals in roe deer. Anim. Behav. 86, 143–151 (2013).
    Google Scholar 
    69.Careau, V. & T. G., Jr. Performance, personality, and energetics: correlation, causation, and mechanism. Physiol. Biochem. Zool. 85, 543–571 (2012).PubMed 

    Google Scholar 
    70.Chuang, A. & Peterson, C. R. Expanding population edges: theories, traits, and trade‐offs. Glob. Chang. Biol. 22, 494–512 (2016).PubMed 

    Google Scholar 
    71.Arnold, P. A., Delean, S., Cassey, P. & White, C. R. Meta-analysis reveals that resting metabolic rate is not consistently related to fitness and performance in animals. J. Comp. Physiol. B 191, 1097–1110 (2021).PubMed 

    Google Scholar 
    72.Pick, J. L., Nakagawa, S. & Noble, D. W. Reproducible, flexible and high‐throughput data extraction from primary literature: the metaDigitise R package. Method. Ecol. Evol. 10, 426–431 (2019).
    Google Scholar 
    73.Hedges, L. V. & Olkin, I. Statistical Methods for Meta-Analysis. (Academic Press, 1985).74.Hedges, L. V., Gurevich, J. & Curtis, P. S. The meta‐analysis of response ratios in experimental ecology. Ecology 80, 1150–1156 (1999).
    Google Scholar 
    75.Hinchliff, C. E. et al. Synthesis of phylogeny and taxonomy into a comprehensive tree of life. Proc. Natl Acad. Sci. USA 112, 12764–12769 (2015).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    76.Michonneau, F., Brown, J. W. & Winter, D. J. rotl: an R package to interact with the Open Tree of Life data. Method. Ecol. Evol. 7, 1476–1481 (2016).
    Google Scholar 
    77.Paradis, E. & Schliep, K. ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R. Bioinformatics 35, 526–528 (2018).
    Google Scholar 
    78.Bürkner, P.-C. brms: An R package for Bayesian multilevel models using Stan. J. Stat. Softw. 80, 1–28 (2017).
    Google Scholar 
    79.Bürkner, P. Advanced Bayesian multilevel modeling with the R package brms. R Journal 10, 395–411 (2018).80.Gelman, A. & Rubin, D. B. Inference from iterative simulation using multiple sequences. Stat. Sci. 7, 457–472 (1992).
    Google Scholar 
    81.Nakagawa, S., Noble, D. W., Senior, A. M. & Lagisz, M. Meta-evaluation of meta-analysis: ten appraisal questions for biologists. BMC Biol. 15, 1–14 (2017).
    Google Scholar 
    82.Nakagawa, S. et al. Methods for testing publication bias in ecological and evolutionary meta-analyses. Methods Ecol. Evol. (in press, 2021) https://doi.org/10.1111/2041-210X.13724.83.Nakagawa, S. & Santos, E. S. A. Methodological issues and advances in biological meta-analysis. Evol. Ecol. 26, 1253–1274 (2012).
    Google Scholar 
    84.Wu, N. C. & Seebacher, F. Data for Physiology can predict animal activity, exploration, and dispersal. https://github.com/nicholaswunz/dispersal-meta-analysis. More

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    Reconstructing the historical expansion of industrial swine production from Landsat imagery

    Changepoint detection methodAlthough most of the reflectance time series used in the BinSeg–Normal–Mean and BinSeg–Normal–MeanVar algorithms had a normal distribution, several lagoons had distributions that were skewed or did not follow a normal distribution (Fig. S1). However, results suggested that the accuracy of the detected changepoints were not sensitive to the normality assumption or distributional characteristics.The BinSeg-Normal-Mean algorithm had the highest performance (81% of the 340 validation sites) in detecting the correct year of swine waste lagoon construction, followed by BinSeg-Normal-MeanVar (77%). The two algorithms did not detect the same year of construction for 19 waste lagoons; of these 19, the BinSeg-Normal-Mean detected the correct year for 84% of them, while the BinSeg-Normal-MeanVar detected the correct year for only 16%. Therefore, the BinSeg-Normal-MeanVar algorithm was abandoned given it did not provide additional useful information relative to the BinSeg-Normal-Mean algorithm.Despite good performance, the BinSeg-Normal-Mean algorithm consistently detected a changepoint during the period of record for all sites included in the 10% validation set (n = 340 swine waste lagoons). However, 58 of the 340 swine waste lagoons were constructed prior to 1986, before the period of record suitable for detecting an accurate changepoint. Changepoints before 1986 either (1) detected the correct construction year, or (2) incorrectly detected a changepoint due to artifact signals identified on the images taken in 1984, probably associated with the initial satellite commissioning. In the latter circumstance, if the algorithm detected a changepoint due to this signal, it meant that no land-use change was detected after 1986. Therefore, these waste lagoons were estimated as having been constructed before 1986. In some conditions, when a large number of images was available for the year 1985 and 1986, the algorithm was able to detect the changepoint occurring for the years 1985 or 1986. Further, the BinSeg-Normal-Mean algorithm detected a false year of construction for swine waste lagoons for which the mean of the segment after the changepoint (S2) had a greater average than the segment before the changepoint (S1).To increase algorithm performance, we developed a workflow to address some of the aforementioned caveats (Fig. 4). In this workflow, the BinSeg-Normal-Mean algorithm is applied to a B4 reflectance time series at location j. If the BinSeg-Normal-Mean changepoint is identified for a time in or prior to 1986 (Fig. 4a,i,b,i) we assume that the lagoon was constructed in or prior to 1986. Similarly, a lagoon is assumed to be constructed in or prior to 1986 if a BinSeg-Normal-Mean changepoint is identified after 1986 and the mean of S2 is greater than the mean of S1 (Fig. 4a,ii,b,ii). If a changepoint occurred after 1986 and the mean of S1 was greater than S2, then the changepoint was estimated as having occurred between 1987 and 2010 (Fig. 4a,iii,b,iii).Figure 4Changepoint detection algorithm for determining the year of construction of swine waste lagoons. Panel (a) summarizes the algorithm workflow, while panel (b) illustrates specific examples corresponding to each step (i–iii) in the workflow.Full size imageThe performance of the workflow was evaluated using the validation set composed of 10% of the total number of swine waste lagoons (n = 340). With the new approach, 94% of the swine waste lagoon construction years (+ /- one year) were accurately retrieved. A tolerance of + /− 1 year was chosen to account for a lack of images in some years due to issues with image quality (e.g. high cloud cover) (e.g., Fig. 5a), or because construction spanned at least a year (e.g., Fig. 5b). The changepoint detection workflow incorrectly estimated the construction years for 19 of the 340 swine waste lagoons in the validation set; the differences between the observed and predicted years of construction of these lagoons ranged from 2 to 26 years with a median of 8 years.Figure 5Examples of limitations to the changepoint detection algorithm. In some cases, an insufficient number of high-quality Landsat 5 images were available to capture the year of construction of an individual swine waste lagoon (a), resulting in errors of + /− 1 year. In other cases, the changepoint algorithms detected the start of the construction of the swine waste lagoon but the swine waste lagoon was not fully operational until later years due to prolonged construction timelines (b).Full size imageBy visually inspecting historical Google Earth images for each of the lagoon sites for which the model incorrectly estimated construction year, we identified that model errors were associated with swine waste lagoon expansion, pixel transitions to land-use classes other than swine waste lagoons, or issues with pixels being partly covered by clouds or incompletely covered by the lagoon (i.e., narrow and small waste lagoons that do not entirely cover a pixel).Estimating swine waste lagoon construction yearsUsing the newly developed algorithm (Fig. 4), construction years were estimated for each swine waste lagoon in the NC Coastal Plain (Fig. 6); the years of construction for each swine waste lagoon are included in the supplementary material. Most swine waste lagoons were built in the early 90s and prior to the moratorium of 1997. More specifically, 80% of the swine waste lagoons (n = 2,736) were built between 1987 and 1997. Sixteen percent of the swine waste lagoons were constructed in or prior to 1986. A large decrease in the construction of swine waste lagoons occurred after the moratorium of 1997, with only 3.7% of swine waste lagoons being constructed after the moratorium. These results suggest that the 1997 moratorium did not completely halt the construction of lagoons, but dramatically slowed the rate of expansion.Figure 6Spatiotemporal distribution of swine waste lagoon construction (+/- 1 year) across the HUC6 watersheds. This figure was produced using QGIS version QGIS 3.18.3 (https://www.qgis.org/).Full size imageWith regards to hydrological boundaries (Fig. 7a–h), the Cape Fear River watershed had the highest number of swine waste lagoons (i.e., 56%; Fig. 7b), followed by the Neuse River (i.e., 23%; Fig. 7d), the Lower Pee Dee River (i.e., 9%; Fig. 7c) watersheds. The Albemarle-Chowan (Fig. 7a), Onslow Bay (Fig. 7e), Pamlico (Fig. 7f), Roanoke (Fig. 7g), and Upper Pee Dee (Fig. 7h) watersheds all had less than 9% of the total lagoons within the study area.Figure 7Year of construction of the swine waste lagoons (+ /− 1 year) for the HUC6 watersheds. The y-axis scales are unequal between the plots to improve readability. The dashed red lines correspond to the establishment of the moratorium in 1997.Full size imageResults suggested that the Cape Fear River watershed was the center of the historical growth of the swine industry, where over 300 swine waste lagoons were built prior to 1987. The Cape Fear River watershed experienced a steady increase in the number of swine waste lagoons from 1987 to 1990, with an average of 46 swine waste lagoons being built annually. However, after 1991, the pace of swine waste lagoon construction increased dramatically with an average of 192 swine waste lagoons built annually between 1991 and 1997. The highest construction rate occurred in 1994, with 242 swine waste lagoons built. However, after the 1997 moratorium, the construction rate decreased dramatically; in 1997, 153 swine waste lagoons were constructed, and this number dropped to 23 in 1998. After 1998, the annual average number of swine waste lagoons constructed plunged to 5. Although the swine waste lagoon construction rate fell considerably after the 1997 moratorium, the decrease had already started in 1995. The same pattern was observed for the Neuse, Pamlico, Albemarle-Pamlico, and Onslow Bay watersheds.The spatiotemporal distribution of swine waste lagoons at the HUC12 watershed scale emphasized the historical clustering of the swine industry in the NC Coastal Plain. After the moratorium, swine waste lagoons were present within 436 HUC12 watersheds. However, before 1986, they were spread across only 197 HUC12 watersheds (Fig. 8). Before 1986, the density of waste lagoons was relatively low with an average of 3.38 swine waste lagoons per 100 km2 and a maximum of 15.13 swine waste lagoons per 100 km2 (i.e., Clayroot Swamp-Swift Creek watershed) (Fig. 8). In the 90s, swine waste lagoon construction expanded and continued to intensify in the region. After the moratorium of 1997, the average density of waste lagoons per HUC12 watersheds was 10 per 100 km2 with a maximum of 78 waste lagoons per 100 km2 identified in the Maxwell Creek-Stocking Head Creek basin. After 1997, 16 of 436 HUC12 watersheds had a swine waste lagoon density greater than 40 per 100 km2 (Fig. 8).Figure 8Cumulative swine waste lagoon density per 100 km2 reported at the HUC12 watershed scale; HUC6 watersheds shown in gray for reference. This figure was produced using QGIS version QGIS 3.18.3 (https://www.qgis.org/).Full size imageSpatiotemporal distribution of swine waste lagoons in relation to water resourcesDistance of swine waste lagoon sites to the nearest water feature (i.e., reservoir, canal/ditch, lake/pond, stream/river, estuary) were assessed using the NHD. The analysis revealed that over 150 swine waste lagoons were misclassified by the NHD and were documented in the NHD as lake/pond (n = 102) or swamp/marsh (n = 46). Further, we observed that some NHD water features were misclassified as other non-water features (e.g., forest, pasture), and most of these misclassifications were for polygons with an area less than 0.05 km2. Therefore, NHD water features with areas less than 0.05 km2 were removed from subsequent analyses. Distances between swine waste lagoons and waterways were computed from the NHD without features with areas less than 0.05 km2. The new analysis revealed that 3 swine waste lagoons remained misclassified as lake/pond (n = 1) and swamp/marsh (n = 2). Canal/Ditch, lake/pond, stream/river, and swamp/marsh were identified as the NHD features that were most commonly near swine waste lagoons (Fig. 9). Two swine waste lagoons were near a reservoir in which one was identified as a treatment-sewage pond by the NHD.Figure 9Nearest water features distance to swine waste lagoons.Full size imageThe average and median distance of all swine waste lagoons (including those built early and late in the period of record) to the nearest water features were 234 and 177 m, respectively. Further, 92% of the swine waste lagoons were less than 500 m from the nearest waterways. The Mann–Kendall results revealed a significant upward trend over time of swine waste lagoon distances to the nearest water features (alpha = 0.05, p-value = 0.01). A slight increase over time of swine waste lagoon distances to the nearest water feature is also documented in Table 1.Table 1 Temporal average and median of nearest distance (m) of swine waste lagoons to water features. NA indicated that the water feature was not the closest waterway to any of the studied swine waste lagoons for the time period.Full size table More

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    Ecological niche modeling predicting the potential distribution of African horse sickness virus from 2020 to 2060

    1.MacLachlan, N. J. & Guthrie, A. J. Re-emergence of bluetongue, African horse sickness, and other Orbivirus diseases. Vet. Res. 41, 35 (2010).Article 

    Google Scholar 
    2.Zientara, S., Weyer, C. T. & Lecollinet, S. African horse sickness. OIE Revue Sci. Tech. 34, 315–327 (2015).CAS 
    Article 

    Google Scholar 
    3.Ayelet, G. et al. Outbreak investigation and molecular characterization of African horse sickness virus circulating in selected areas of Ethiopia. Acta Trop. 127, 91–96 (2013).Article 

    Google Scholar 
    4.Diarra, M. et al. Spatial distribution modelling of Culicoides (Diptera: Ceratopogonidae) biting midges, potential vectors of African horse sickness and bluetongue viruses in Senegal. Parasit. Vectors 11, 1–15 (2018).Article 

    Google Scholar 
    5.Karamalla, S. T. et al. Sero-epidemioloical survey on African horse sickness virus among horses in Khartoum State, Central Sudan. BMC Vet. Res. 14, 1–6 (2018).Article 

    Google Scholar 
    6.Escobar, L. E. Ecological Niche modeling: An introduction for veterinarians and epidemiologists. Front. Vet. Sci. 7, 519059. https://doi.org/10.3389/fvets.2020.519059 (2020).Article 
    PubMed 
    PubMed Central 

    Google Scholar 
    7.Okely, M., Anan, R., Gad-Allah, S. & Samy, A. M. Mapping the environmental suitability of etiological agent and tick vectors of Crimean-Congo hemorrhagic fever. Acta Trop. 203, 105319 (2020).CAS 
    Article 

    Google Scholar 
    8.Chavy, A. et al. Ecological niche modelling for predicting the risk of cutaneous leishmaniasis in the Neotropical moist forest biome. PLoS Negl. Trop. Diseases 13, e0007629 (2019).Article 

    Google Scholar 
    9.Sloyer, K. E. et al. Ecological niche modeling the potential geographic distribution of four Culicoides species of veterinary significance in Florida, USA. PLoS ONE 14, e0206648 (2019).CAS 
    Article 

    Google Scholar 
    10.Fick, S. E. & Hijmans, R. J. WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas. Int. J. Climatol. 37, 4302–4315 (2017).Article 

    Google Scholar 
    11.Cao, Z., Jin, Y., Shen, T., Xu, F. & Li, Y. Risk factors and distribution for peste des petits ruminants (PPR) in Mainland China. Small Rumin. Res. 162, 12–16 (2018).Article 

    Google Scholar 
    12.Naimi, B. & Araújo, M. B. sdm: a reproducible and extensible R platform for species distribution modelling. Ecography 39, 368–375 (2016).Article 

    Google Scholar 
    13.Naimi, B., Hamm, N. A. S., Groen, T. A., Skidmore, A. K. & Toxopeus, A. G. Where is positional uncertainty a problem for species distribution modelling. undefined 37, 191–203 (2014).
    Google Scholar 
    14.R Core Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing, (2020).15.Thuiller, W., Lafourcade, B., Engler, R. & Araújo, M. B. BIOMOD—a platform for ensemble forecasting of species distributions. Ecography 32, 369–373 (2009).Article 

    Google Scholar 
    16.Araújo, M. B. & New, M. Ensemble forecasting of species distributions. Trends Ecol. Evol. 22, 42–47 (2007).Article 

    Google Scholar 
    17.Uusitalo, R. et al. Predicting spatial patterns of sindbis virus (Sinv) infection risk in finland using vector, host and environmental data. Int. J. Environ. Res. Public Health 18, 7064 (2021).Article 

    Google Scholar 
    18.Raffini, F. et al. From nucleotides to satellite imagery: Approaches to identify and manage the invasive pathogen Xylella fastidiosa and its insect vectors in Europe. Sustainability (Switzerland) 12, 4508 (2020).CAS 
    Article 

    Google Scholar 
    19.Phillips, S. B., Aneja, V. P., Kang, D. & Arya, S. P. Maximum entropy modeling of species geographic distributions. Ecol. Model. 190, 231–259 (2006).Article 

    Google Scholar 
    20.Barbet-Massin, M., Jiguet, F., Albert, C. H. & Thuiller, W. Selecting pseudo-absences for species distribution models: how, where and how many?. Methods Ecol. Evol. 3, 327–338 (2012).Article 

    Google Scholar 
    21.Hernández-Urcera, J., Murillo, F. J., Regueira, M., Cabanellas-Reboredo, M. & Planas, M. Preferential habitats prediction in syngnathids using species distribution models. Marine Environ. Res. 172, 105488 (2021).Article 

    Google Scholar 
    22.Smeraldo, S. et al. Generalists yet different: distributional responses to climate change may vary in opportunistic bat species sharing similar ecological traits. Mammal Rev. 51, 571–584 (2021).Article 

    Google Scholar 
    23.Thomson, A. M. et al. RCP4.5: A pathway for stabilization of radiative forcing by 2100. Clim. Change 109, 77–94 (2011).ADS 
    CAS 
    Article 

    Google Scholar 
    24.QGIS Development Team. QGIS Geographic Information System. Open-Source Geospatial Foundation Project. (2020).25.Ramirez-Reyes, C. et al. Embracing ensemble species distribution models to inform at-risk species status assessments. J. Fish Wildl. Manag. 12, 98–111 (2021).Article 

    Google Scholar 
    26.Stephenson, F. et al. Presence-only habitat suitability models for vulnerable marine ecosystem indicator taxa in the South Pacific have reached their predictive limit. ICES J. Mar. Sci. 78, 2830–2843 (2021).Article 

    Google Scholar 
    27.Zhu, G., Fan, J. & Peterson, A. T. Cautions in weighting individual ecological niche models in ensemble forecasting. Ecol. Modelling 448, 109502 (2021).Article 

    Google Scholar 
    28.Leta, S. et al. Modeling the global distribution of Culicoides imicola: an Ensemble approach. Sci. Rep. 9, 1–9 (2019).ADS 
    CAS 
    Article 

    Google Scholar 
    29.Onyango, M. G. et al. Delineation of the population genetic structure of Culicoides imicola in East and South Africa. Parasit. Vectors 8, 660 (2015).Article 

    Google Scholar 
    30.Carpenter, S., Mellor, P. S., Fall, A. G., Garros, C. & Venter, G. J. African horse sickness virus: history. Transm. Curr. Status. 62, 343–358. https://doi.org/10.1146/annurev-ento-031616-035010 (2017).CAS 
    Article 

    Google Scholar 
    31.Carpenter, S., Mellor, P. S., Fall, A. G., Garros, C. & Venter, G. J. African Horse Sickness Virus: History, Transmission, and Current Status. Annu. Rev. Entomol. 62, 343–358 (2017).CAS 
    Article 

    Google Scholar 
    32.Fall, M. et al. Culicoides (Diptera: Ceratopogonidae) midges, the vectors of African horse sickness virus—a host/vector contact study in the Niayes area of Senegal. Parasit. Vectors 8, 1–13 (2015).Article 

    Google Scholar 
    33.Mellor, P. S. Epizootiology and vectors of African horse sickness virus. Comp. Immunol. Microbiol. Infect. Dis. 17, 287–296 (1994).CAS 
    Article 

    Google Scholar 
    34.Wu, X., Lu, Y., Zhou, S., Chen, L. & Xu, B. Impact of climate change on human infectious diseases: Empirical evidence and human adaptation. Environ. Int. 86, 14–23 (2016).Article 

    Google Scholar 
    35.Nosrat, C. et al. Impact of recent climate extremes on mosquito-borne disease transmission in Kenya. PLOS Negl. Trop. Diseases 15, e0009182 (2021).CAS 
    Article 

    Google Scholar 
    36.Abiodun, G. J., Maharaj, R., Witbooi, P. & Okosun, K. O. Modelling the influence of temperature and rainfall on the population dynamics of Anopheles arabiensis. Malar. J. 15, 1–15 (2016).Article 

    Google Scholar  More

  • in

    Behavioural traits of rainbow trout and brown trout may help explain their differing invasion success and impacts

    1.Holway, D. A. & Suarez, A. V. Animal behavior: An essential component of invasion biology. TREE 14, 328–330 (1999).CAS 
    PubMed 

    Google Scholar 
    2.Chapple, D. G., Simmonds, S. M. & Wong, B. B. M. Can behavioral and personality traits influence the success of unintentional species introductions? Trends Ecol. Evol. 27, 57–64 (2012).PubMed 

    Google Scholar 
    3.Weis, J. & Sol, D. Behaviour and the Invasion Process. in Biological Invasions and Animal Behaviour 5–116 (Cambridge University Press, 2016).4.Cote, J., Fogarty, S., Weinersmith, K., Brodin, T. & Sih, A. Personality traits and dispersal tendency in the invasive mosquitofish (Gambusia affinis). Proc. R. Soc. B Biol. Sci. 277, 1571–1579 (2010).
    Google Scholar 
    5.Myles-Gonzalez, E., Burness, G., Yavno, S., Rooke, A. & Fox, M. G. To boldly go where no goby has gone before: Boldness, dispersal tendency, and metabolism at the invasion front. Behav. Ecol. 26, 1083–1090 (2015).
    Google Scholar 
    6.Mutascio, H. E., Pittman, S. E. & Zollner, P. A. Investigating movement behavior of invasive Burmese pythons on a shy–bold continuum using individual-based modeling. Perspect. Ecol. Conserv. 15, 25–31 (2017).
    Google Scholar 
    7.Chuang, A. Living Life on the Edge: The Role of Invasion Processes in Shaping Personalities in a Non-Native Spider Species (The University of Tennessee, Knoxville, 2019). https://doi.org/10.1017/CBO9781107415324.004.Book 

    Google Scholar 
    8.Blackburn, T. M. et al. A proposed unified framework for biological invasions. Trends Ecol. Evol. 26, 333–339 (2011).PubMed 

    Google Scholar 
    9.Pintor, L. M., Sih, A. & Kerby, J. L. Behavioral correlations provide a mechanism for explaining high invader densities and increased impacts on native prey. Ecology 90, 581–587 (2009).PubMed 

    Google Scholar 
    10.Petren, K. & Case, T. J. An experimental demonstration of exploitation competition in an ongoing invasion. Ecology 77, 118–132 (1996).
    Google Scholar 
    11.Wright, T. F., Eberhard, J. R., Hobson, E. A., Avery, M. L. & Russello, M. A. Behavioral flexibility and species invasions: The adaptive flexibility hypothesis. Ethol. Ecol. Evol. 22, 393–404 (2010).
    Google Scholar 
    12.Dick, J. T. A. Role of behaviour in biological invasions and species distributions; lessons from interactions between the invasive Gammarus pulex and the native G. duebeni (Crustacea: Amphipoda). Contrib. Zool. 77, 91–98 (2008).
    Google Scholar 
    13.Dick, J. T. A. et al. Invader Relative Impact Potential: A new metric to understand and predict the ecological impacts of existing, emerging and future invasive alien species. J. Appl. Ecol. 54, 1259–1267 (2017).
    Google Scholar 
    14.Dick, J. T. A., Elwood, R. W. & Montgomery, W. I. The behavioural basis of a species replacement: differential aggresssion and predation between the introduced Gammarus pulex and the native G. duebeni celticus (Amphipoda). Behav. Ecol. Sociobiol. 37, 393–398 (1995).
    Google Scholar 
    15.Dick, J. T. A. et al. Ecological impacts of an invasive predator explained and predicted by comparative functional responses. Biol. Invasions 15, 837–846 (2013).
    Google Scholar 
    16.Dick, J. T. A. et al. Advancing impact prediction and hypothesis testing in invasion ecology using a comparative functional response approach. Biol. Invasions 16, 735–753 (2014).
    Google Scholar 
    17.Iacarella, J. C., Dick, J. T. A. & Ricciardi, A. A spatio-temporal contrast of the predatory impact of an invasive freshwater crustacean. Divers. Distrib. 21, 803–812 (2015).
    Google Scholar 
    18.Toscano, B. J. & Griffen, B. D. Trait-mediated functional responses: Predator behavioural type mediates prey consumption. J. Anim. Ecol. 83, 1469–1477 (2014).PubMed 

    Google Scholar 
    19.MacCrimmon, H. R. World distribution of rainbow trout (Salmo gairdneri): further observations. J. Fish. Res. Board Canada 28, 663–704 (1971).
    Google Scholar 
    20.MacCrimmon, H. R., Marshall, T. L. & Gots, B. L. World distribution of brown trout, Salmo trutta: further observations. J. Fish. Res. Board Canada 27, 811–818 (1970).
    Google Scholar 
    21.Crawford, S. S. & Muir, A. M. Global introductions of salmon and trout in the genus Oncorhynchus: 1870–2007. Rev. Fish Biol. Fish. 18, 313–344 (2008).
    Google Scholar 
    22.Crowl, T. A., Townsend, C. R. & Mcintosh, A. R. The impact of introduced brown and rainbow trout on native fish: The case of Australasia. Rev. Fish Biol. Fish. 241, 217–241 (1992).
    Google Scholar 
    23.Hasegawa, K. Invasions of rainbow trout and brown trout in Japan: A comparison of invasiveness and impact on native species. Ecol. Freshw. Fish 29, 419–428 (2020).
    Google Scholar 
    24.Cambray, J. A. The global impact of alien trout species—A review; with reference to their impact in South Africa. African J. Aquat. Sci. 28, 61–67 (2003).
    Google Scholar 
    25.Dunham, J. B., Wheeler, A. & Rosenberger, A. Assessing the consequences of nonnative trout in headwater ecosystems in western North America. Fisheries 29, 37–41 (2004).
    Google Scholar 
    26.Fausch, K. D., Taniguchi, Y., Nakano, S., Grossman, G. D. & Townsend, C. R. Flood disturbance regimes influence rainbow trout invasion success among five holarctic regions. Ecol. Appl. 11, 1438–1455 (2001).
    Google Scholar 
    27.Anderson, R. M. & Nehring, R. B. Effects of a catch-and-release regulation on a wild trout population in Colorado and its acceptance by Anglers. North Am. J. Fish. Manag. 4, 257–265 (1984).
    Google Scholar 
    28.Young, K. A. et al. A trial of two trouts: Comparing the impacts of rainbow and brown trout on a native galaxiid. Anim. Conserv. 13, 399–410 (2010).
    Google Scholar 
    29.Conrad, J. L., Weinersmith, K. L., Brodin, T., Saltz, J. B. & Sih, A. Behavioural syndromes in fishes: A review with implications for ecology and fisheries management. J. Fish Biol. 78, 395–435 (2011).CAS 
    PubMed 

    Google Scholar 
    30.Mowles, S. L., Cotton, P. A. & Briffa, M. Consistent crustaceans: The identification of stable behavioural syndromes in hermit crabs. Behav. Ecol. Sociobiol. 66, 1087–1094 (2012).
    Google Scholar 
    31.Sih, A., Bell, A. & Johnson, J. C. Behavioral syndromes: An ecological and evolutionary overview. Trends Ecol. Evol. 19, 372–378 (2004).PubMed 

    Google Scholar 
    32.Bell, A. M. Behavioural differences between individuals and two populations of stickleback (Gasterosteus aculeatus). J. Evol. Biol. 18, 464–473 (2005).CAS 
    PubMed 

    Google Scholar 
    33.Bourne, G. R. & Sammons, A. J. Boldness, aggression and exploration: evidence for a behavioural syndrome in male pentamorphic livebearing fish, Poecilia parae. AACL Bioflux 1, 39–50 (2008).
    Google Scholar 
    34.Lukas, J. et al. Consistent behavioral syndrome across seasons in an invasive freshwater fish. Front. Ecol. Evol. 8, 466 (2021).ADS 

    Google Scholar 
    35.Gjedrem, T., Gjøen, H. M. & Gjerde, B. Genetic origin of Norwegian farmed Atlantic salmon. Aquaculture 98, 41–50 (1991).
    Google Scholar 
    36.Huntingford, F. & Adams, C. Behavioural syndromes in farmed fish: Implications for production and welfare. Behaviour 142, 1207–1221 (2005).
    Google Scholar 
    37.Alvarez, D. & Nicieza, A. G. Predator avoidance behaviour in wild and hatchery-reared brown trout : The role of experience and domestication. J. Fish Biol. 63, 1565–1577. https://doi.org/10.1046/j.1095-8649.2003.00267.x (2003).Article 

    Google Scholar 
    38.Geffroy, B. et al. Evolutionary dynamics in the anthropocene: Life history and intensity of human contact shape antipredator responses. PLoS Biol. 18, 1–17 (2020).
    Google Scholar 
    39.Lincoln, R. F. & Scott, A. P. Production of all-female triploid rainbow trout. Aquaculture 30, 375–380 (1983).
    Google Scholar 
    40.Maxime, V. The physiology of triploid fish: Current knowledge and comparisons with diploid fish. Fish Fish. 9, 67–78 (2008).
    Google Scholar 
    41.Chatterji, R., Longley, D., Sandford, D., Roberts, D. & Stubbing, D. Performance of stocked triploid and diploid brown trout and their effects on wild brown trout in UK rivers. (2008).42.Benfey, T. J. The physiology and behavior of triploid fishes. Rev. Fish. Sci. 7, 39–67 (1999).
    Google Scholar 
    43.Carter, C. G. et al. Food consumption, feeding behaviour, and growth of triploid and diploid Atlantic salmon, Salmo salar L., parr.. Can. J. Zool. 72, 609–617 (1994).
    Google Scholar 
    44.Weber, G. M., Hostuttler, M. A., Cleveland, B. M. & Leeds, T. D. Growth performance comparison of intercross-triploid, induced triploid, and diploid rainbow trout. Aquaculture 433, 85–93 (2014).
    Google Scholar 
    45.Øverli, Ø., Pottinger, T. G., Carrick, T. R., Øverli, E. & Winberg, S. Differences in behaviour between rainbow trout selected for high- and low-stress responsiveness. J. Exp. Biol. 205, 391–395 (2002).PubMed 

    Google Scholar 
    46.Sadoul, B., Leguen, I., Colson, V., Friggens, N. C. & Prunet, P. A multivariate analysis using physiology and behavior to characterize robustness in two isogenic lines of rainbow trout exposed to a confinement stress. Physiol. Behav. 140, 139–147 (2015).CAS 
    PubMed 

    Google Scholar 
    47.Adriaenssens, B. & Johnsson, J. I. Learning and context-specific exploration behaviour in hatchery and wild brown trout. Appl. Anim. Behav. Sci. 132, 90–99 (2011).
    Google Scholar 
    48.Näslund, J. & Johnsson, J. I. State-dependent behavior and alternative behavioral strategies in brown trout (Salmo trutta L.) fry. Behav. Ecol. Sociobiol. 70, 2111–2125 (2016).PubMed 
    PubMed Central 

    Google Scholar 
    49.Mortensen, E. Density-dependent mortality of trout fry (Salmo trutta L.) and its relationship to the management of small streams. J. Fish Biol. 11, 613–617 (1977).
    Google Scholar 
    50.Armstrong, J. D. & Nislow, K. H. Critical habitat during the transition from maternal provisioning in freshwater fish, with emphasis on Atlantic salmon (Salmo salar) and brown trout (Salmo trutta). J. Zool. 269, 403–413 (2006).
    Google Scholar 
    51.Walsh, R. N. & Cummins, R. A. The open-field test: A critical review. Psychol. Bull. 83, 482–504 (1976).CAS 
    PubMed 

    Google Scholar 
    52.Adriaenssens, B. & Johnsson, J. I. Shy trout grow faster: Exploring links between personality and fitness-related traits in the wild. Behav. Ecol. 22, 135–143 (2010).
    Google Scholar 
    53.Sneddon, L. U. The bold and the shy: Individual differences in rainbow trout. J. Fish Biol. 62, 971–975 (2003).
    Google Scholar 
    54.Adriaenssens, B. Individual variation in behaviour: personality and performance of brown trout in the wild (University of Gothenburg, 2010).55.Elias, A., Thrower, F. & Nichols, K. M. Rainbow trout personality: Individual behavioural variation in juvenile Oncorhynchus mykiss. Behaviour 155, 205–230 (2018).
    Google Scholar 
    56.Dick, J. T. A. et al. Functional responses can unify invasion ecology. Biol. Invasions 19, 1667–1672 (2017).
    Google Scholar 
    57.Sloman, K. A., Metcalfe, N. B., Taylor, A. C. & Gilmour, K. M. Plasma cortisol concentrations before and after social stress in rainbow trout and brown trout. Physiol. Biochem. Zool. 74, 383–389 (2001).CAS 
    PubMed 

    Google Scholar 
    58.Sadoul, B., Blumstein, D. T., Alfonso, S. & Geffroy, B. Human protection drives the emergence of a new coping style in animals. PLoS Biol. 19, 1–11 (2021).
    Google Scholar 
    59.Campbell, J. M., Carter, P. A., Wheeler, P. A. & Thorgaard, G. H. Aggressive behavior, brain size and domestication in clonal rainbow trout lines. Behav. Genet. 45, 245–254 (2015).PubMed 

    Google Scholar 
    60.Berejikian, B. A., Mathews, S. B. & Quinn, T. P. Effects of hatchery and wild ancestry and rearing environments on the development of agonistic behavior in steelhead trout (Oncorhynchus mykiss) fry. Can. J. Fish. Aquat. Sci. 53, 2004–2014 (1996).
    Google Scholar 
    61.Laverty, C. et al. Assessing the ecological impacts of invasive species based on their functional responses and abundances. Biol. Invasions 19, 1653–1665 (2017).
    Google Scholar 
    62.Alexander, M. E., Dick, J. T. A., Weyl, O. L. F., Robinson, T. B. & Richardson, D. M. Existing and emerging high impact invasive species are characterized by higher functional responses than natives. Biol. Lett. 10, 20130946 (2014).PubMed 
    PubMed Central 

    Google Scholar 
    63.Dickey, J. W. E., Cuthbert, R. N., Steffen, G. T., Dick, J. T. A. & Briski, E. Sea freshening may drive the ecological impacts of emerging and existing invasive non-native species. Divers. Distrib. 27, 144–156 (2021).
    Google Scholar 
    64.Sadler, J., Pankhurst, P. M. & King, H. R. High prevalence of skeletal deformity and reduced gill surface area in triploid Atlantic salmon (Salmo salar L.). Aquaculture 198, 369–386 (2001).
    Google Scholar 
    65.Benfey, T. J. & Biron, M. Acute stress response in triploid rainbow trout (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis). Aquaculture 184, 167–176 (2000).CAS 

    Google Scholar 
    66.Sadler, J., Pankhurst, N. W., Pankhurst, P. M. & King, H. Physiological stress responses to confinement in diploid and triploid Atlantic salmon. J. Fish Biol. 56, 506–518 (2000).
    Google Scholar 
    67.Berrebi, P., Splendiani, A., Palm, S. & Berna, R. Genetic diversity of domestic brown trout stocks in Europe. Aquaculture 544, 737043 (2021).CAS 

    Google Scholar 
    68.Gross, R., Lulla, P. & Paaver, T. Genetic variability and differentiation of rainbow trout (Oncorhynchus mykiss) strains in northern and Eastern Europe. Aquaculture 272, 139–146 (2007).
    Google Scholar 
    69.Whelan, K. Assessing and mitigating the impact of a major rainbow trout escape on the wild salmon and trout populations of the Mourne river system, Northern Ireland. (2017).70.Shelton, J. et al. Temperature mediates the impact of non-native rainbow trout on native freshwater fishes in South Africa’s Cape Fold Ecoregion. Biol. Invasions 20, 2927–2944 (2018).
    Google Scholar 
    71.Michelangeli, M. et al. Sex-dependent personality in two invasive species of mosquitofish. Biol. Invasions 22, 1353–1364 (2020).
    Google Scholar 
    72.Friard, O. & Gamba, M. BORIS: A free, versatile open-source event-logging software for video/audio coding and live observations. Methods Ecol. Evol. 7, 1325–1330 (2016).
    Google Scholar 
    73.R Core Team. R: A language and environment for statistical computing. (2018).74.RStudio Team. RStudio Team (2020). RStudio: Integrated Development for R. RStudio, PBC, Boston, MA. http://www.rstudio.com/. 2019 (2020).75.Zuur, A. F., Ieno, E. N., Walker, N. J., Saveliev, A. A. & Smith, G. M. Mixed effects models and extensions in ecology with R. Springer https://doi.org/10.1086/648138 (2008).Article 
    MATH 

    Google Scholar 
    76.Bates, D., Mächler, M., Bolker, B. M. & Walker, S. C. Fitting linear mixed-effects models using lme4. J. Stat. Softw. 67, 18637 (2015).
    Google Scholar 
    77.Wickham, H., François, R., Henry, L. & Müller, K. dplyr: A Grammar of Data Manipulation. R package version. Media https://doi.org/10.1007/978-0-387-98141-3 (2019).Article 

    Google Scholar 
    78.Wickham, H. ggplot2: Elegant Graphics for Data Analysis (Springer-Verlag, 2016).MATH 

    Google Scholar 
    79.Barton, K. MuMIn: Multi-Model Inference. 2020 (2020).80.Lenth, R., Singmann, H., Love, J., Buerkner, P. & Herve, M. emmeans: estimated marginal means, aka least-squares means. R package version 1.5.2-1 (2020).81.Pritchard, D. frair: tools for functional response analysis. R package version 0.0.100 (2017).82.Juliano, S. A. Predation and functional response curves. in Design and Analysis of Ecological Experiments (eds. Scheiner, S. & Gurevitch, J.) Chapter 10 (2001).83.Rogers, D. Random search and insect population models. J. Anim. Ecol. 41, 369–383 (1972).
    Google Scholar 
    84.Bolker, B. M. Rogers random predator equation: extensions and estimation by numerical integration. 1–20 (2012). More

  • in

    Parallel evolution of urban–rural clines in melanism in a widespread mammal

    1.Angel, S. et al. The dimensions of global urban expansion: Estimates and projections for all countries, 2000–2050. Prog. Plan. 75, 53–107 (2011).
    Google Scholar 
    2.Grimm, N. B. et al. Global change and the ecology of cities. Science 319, 756–760 (2008).ADS 
    CAS 
    PubMed 

    Google Scholar 
    3.McKinney, M. L. Urbanization as a major cause of biotic homogenization. Biol. Conserv. 127, 247–260 (2006).
    Google Scholar 
    4.Groffman, P. M. et al. Ecological homogenization of urban USA. Front. Ecol. Environ. 12, 74–81 (2014).
    Google Scholar 
    5.Bolnick, D. I. et al. (Non)Parallel evolution. Annu. Rev. Ecol. Evol. Syst. 49, 303–330 (2018).
    Google Scholar 
    6.Donihue, C. M. & Lambert, M. R. Adaptive evolution in urban ecosystems. Ambio 44, 194–203 (2015).PubMed 

    Google Scholar 
    7.Johnson, M. T. J. & Munshi-South, J. Evolution of life in urban environments. Science 358, eaam8327 (2017).
    Google Scholar 
    8.Rivkin, L. R. et al. A roadmap for urban evolutionary ecology. Evol. Appl. 12, 384–398 (2019).PubMed 

    Google Scholar 
    9.Santangelo, J. S. et al. Urban environments as a framework to study parallel evolution. In Urban Evolutionary Biology (eds Szulkin, M. et al.) (Oxford University Press, 2020).
    Google Scholar 
    10.Cosentino, B. J., Moore, J.-D., Karraker, N. E., Ouellet, M. & Gibbs, J. P. Evolutionary response to global change: Climate and land use interact to shape color polymorphism in a woodland salamander. Ecol. Evol. 7, 5426–5434 (2017).PubMed 
    PubMed Central 

    Google Scholar 
    11.Koprowski, J. L., Munroe, K. E. & Edelman, A. J. Gray not grey: Ecology of Sciurus carolinensis in their native range in North America. In Grey Squirrels: Ecology and Management of an Invasive Species in Europe (eds Shuttleworth, C. M. et al.) (European Squirrel Initiative, 2016).
    Google Scholar 
    12.McRobie, H., Thomas, A. & Kelly, J. The genetic basis of melanism in the gray squirrel (Sciurus carolinensis). J. Hered. 100, 709–714 (2009).CAS 
    PubMed 

    Google Scholar 
    13.Gibbs, J. P., Buff, M. F. & Cosentino, B. J. The biological system: Urban wildlife, adaptation and evolution: Urbanization as a driver of contemporary evolution in gray squirrels (Sciurus carolinensis). In Understanding Urban Ecology (eds Hall, M. A. & Balogh, S.) (Springer, 2019).
    Google Scholar 
    14.Lehtinen, R. M. et al. Dispatches form the neighborhood watch: Using citizen science and field survey data to document color morph frequency in space and time. Ecol. Evol. 10, 1526–1538 (2020).PubMed 
    PubMed Central 

    Google Scholar 
    15.Perlut, N. G. Long-distance dispersal by eastern gray squirrels in suburban habitats. Northeast. Nat. 27, 195–200 (2020).
    Google Scholar 
    16.Goheen, J. R., Swihart, R. K., Gehring, T. M. & Miller, M. S. Forces structuring tree squirrel communities in landscapes fragmented by agriculture: Species differences in perceptions of forest connectivity and carrying capacity. Oikos 102, 95–103 (2003).
    Google Scholar 
    17.Ducharme, M. B., Larochelle, J. & Richard, D. Thermogenic capacity in gray and black morphs of the gray squirrel, Sciurus carolinensis. Physiol. Zool. 62, 1273–1292 (1989).
    Google Scholar 
    18.Linnen, C. R. & Hoekstra, H. E. Measuring natural selection on genotypes and phenotypes in the wild. Cold Spring Harb. Symp. Quant. Biol. 74, 155–168 (2010).PubMed Central 

    Google Scholar 
    19.Campbell-Staton, S. C. et al. Parallel selection on thermal physiology facilitates repeated adaptation of city lizards to urban heat islands. Nat. Ecol. Evol. 4, 652–658 (2020).PubMed 

    Google Scholar 
    20.Reid, N. M. et al. The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish. Science 354, 1305–1308 (2016).ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    21.Bowers, M. A. & Breland, B. Foraging of gray squirrels on an urban-rural gradient: Use of the GUD to assess anthropogenic impact. Ecol. Appl. 6, 1135–1142 (1996).
    Google Scholar 
    22.McCleery, R. A., Lopez, R. R., Silvy, N. J. & Gallant, D. L. Fox squirrel survival in urban and rural environments. J. Wildl. Manage. 72, 133–137 (2008).
    Google Scholar 
    23.Benson, E. The urbanization of the eastern gray squirrel in the United States. J. Am. Hist. 100, 691–710 (2013).
    Google Scholar 
    24.Leveau, L. United colours of the city: A review about urbanization impact on animal colours. Austral Ecol. 46, 670–679 (2021).
    Google Scholar 
    25.Ducrest, A.-L., Keller, L. & Roulin, A. Pleiotropy in the melanocortin system, coloration, and behavioural syndromes. Trends Ecol. Evol. 23, 502–510 (2008).PubMed 

    Google Scholar 
    26.Stothart, M. R. & Newman, A. E. M. Shades of grey: Host phenotype dependent effect of urbanization on the bacterial microbiome of a wild mammal. Anim. Microbiome. 3, 46 (2021).PubMed 
    PubMed Central 

    Google Scholar 
    27.Vasemägi, A. The adaptive hypothesis of clinal variation revisited: Single-locus clines as a result of spatially restricted gene flow. Genetics 173, 2411–2414 (2006).PubMed 
    PubMed Central 

    Google Scholar 
    28.Merrick, M. J., Evans, K. L. & Bertolino, S. Urban grey squirrel ecology, associated impacts, and management challenges. In Grey Squirrels: Ecology and Management of an Invasive Species in Europe (eds Shuttleworth, C. M. et al.) (European Squirrel Initiative, 2016).
    Google Scholar 
    29.Chipman, R., Slate, D., Rupprecht, C. & Mendoza, M. Downside risk of wildlife translocation. In Towards the Elimination of Rabies in Eurasia (eds Dodet, B. et al.) (Dev. Biol Basel, Karger, 2008).
    Google Scholar 
    30.Allen, D. L. Michigan Fox Squirrel Management (Michigan Department of Conservation, 1943).
    Google Scholar 
    31.Schorger, A. W. Squirrels in early Wisconsin. Trans. Wis. Acad. Sci. Arts Lett. 39, 195–247 (1949).
    Google Scholar 
    32.Robertson, G. I. Distribution of Color Morphs of Sciurus carolinensis in Eastern North America (University of Western Ontario, 1973).
    Google Scholar 
    33.MacCleery, D. W. American Forests: A History of Resiliency and Recovery (Forest History Society, 2011).
    Google Scholar 
    34.Foster, D. R. et al. Wildlands and Woodlands: A Vision for the New England Landscape (Harvard University Press, 2010).
    Google Scholar 
    35.Thompson, R. T., Carpenter, D. N., Cogbill, C. V. & Foster, D. R. Four centuries of change in northeastern United States forests. PLoS ONE 8(9), e72540 (2013).ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    36.Lambert, M. R. et al. Adaptive evolution in cities: Progress and misconceptions. Trends Ecol. Evol. 36, 239–257 (2021).PubMed 

    Google Scholar 
    37.Farquhar, D. N. Some Aspects of Thermoregulation as Related to the Geographic Distribution of the Northern Melanic Phase of the Grey Squirrel (York University, 1974).
    Google Scholar 
    38.Innes, S. & Lavigne, D. M. Comparative energetics of coat colour polymorphs in the eastern gray squirrel Sciurus carolinensis. Can. J. Zool. 57, 585–592 (1979).
    Google Scholar 
    39.Santangelo, J. S. et al. Predicting the strength of urban-rural clines in a Mendelian polymorphism along a latitudinal gradient. Evol. Lett. 4, 212–225 (2020).PubMed 
    PubMed Central 

    Google Scholar 
    40.Fidino, M. et al. Landscape-scale differences among cities alter common species’ responses to urbanization. Ecol. Appl. 31, e02253 (2021).PubMed 

    Google Scholar 
    41.Dickinson, J. L., Zuckerberg, B. & Bonter, D. N. Citizen science as an ecological research tool: Challenges and benefits. Annu. Rev. Ecol. Evol. Syst. 41, 149–172 (2010).
    Google Scholar 
    42.Alberti, M. Global urban signatures of phenotypic change in animal and plant populations. Proc. Natl. Acad. Sci. U.S.A. 114, 8951–8956 (2017).CAS 
    PubMed 
    PubMed Central 

    Google Scholar 
    43.United States Census Bureau. 2019 TIGER/Line Shapefiles (machine-readable data files) https://www2.census.gov/geo/tiger/TIGER2019/UAC/ (2019).44.XX. Statistics Canada. Population Centre Boundary File, Census year 2016 https://www150.statcan.gc.ca/n1/en/catalogue/92-166-X (2017).45.Aiello-Lammens, M. E. et al. spThin: An R package for spatial thinning of species occurrence records for use in ecological niche models. Ecography 38, 541–545 (2015).
    Google Scholar 
    46.R Core Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. (2020).47.Brown de Colstoun, E. C. et al. Documentation for the Global Man-made Impervious Surface (GMIS) Dataset from Landsat (NASA Socioeconomic Data and Applications Center, 2017).
    Google Scholar 
    48.Steele, M. A. & Koprowski, J. L. North American Tree Squirrels (Smithsonian Books, 2001).
    Google Scholar 
    49.Hansen, M. C. et al. High-resolution global maps of 21st-century forest cover change. Science 342, 850–853 (2013).ADS 
    CAS 
    PubMed 

    Google Scholar 
    50.Fick, S. E. & Hijmans, R. J. WorldClim 2: New 1km spatial resolution climate surfaces for global land areas. Int. J. Climatol. 37, 4302–4315 (2017).
    Google Scholar 
    51.Hijmans, R. L. raster: Geographic data analysis and modeling. R package version 3.3–13. https://CRAN.R-project.org/package=raster (2020).52.Baston, D. exactextractr: Fast extraction from raster datasets using polygons. R package version 0.5.1. https://CRAN.R-project.org/package=exactextractr (2020).53.Harrison, X. A. et al. A brief introduction to mixed effects modelling and multi-model inference in ecology. PeerJ 6, e4794 (2018).PubMed 
    PubMed Central 

    Google Scholar 
    54.Bates, D., Maechler, M., Bolker, B. & Walker, S. Fitting linear mixed-effects models using lme4. J. Stat. Softw. 67, 1–48 (2015).
    Google Scholar 
    55.Gelman, A. & Su, Y. arm: Data analysis using regression and multilevel/hierarchical models. R package version 1.11–2. https://CRAN.R-project.org/package=arm (2020).56.Gelman, A. & Hill, J. Data Analysis Using Regression and Multilevel/Hierarchical Models (Cambridge University Press, 2007).
    Google Scholar 
    57.Crase, B., Liedloff, A. C. & Wintle, B. A. A new method for dealing with residual spatial autocorrelation in species distribution models. Ecography 35, 879–888 (2012).
    Google Scholar 
    58.Bivand, R. S. & Wong, D. W. S. Comparing implementations of global and local indicators of spatial association. TEST 27, 716–748 (2018).MathSciNet 
    MATH 

    Google Scholar 
    59.Bardos, D. C., Guillera-Arroita, G. & Wintle, B. A. Valid auto-models for spatially autocorrelated occupancy and abundance data. Methods Ecol. Evol. 6, 1137–1149 (2015).
    Google Scholar  More

  • in

    Poaching of protected wolves fluctuated seasonally and with non-wolf hunting

    Time-to-event models for wild animals generally model exposure of individuals to natural conditions that may affect the risk of mortality and disappearance. Most models neglect to consider seasons of high human activity that may affect such risks, or interactions between endpoint hazards (reflected in incidences) that may illuminate ecology. For many large carnivores, which suffer from low natural mortality yet are also subject to high risk of anthropogenic mortality and poaching, seasons of anthropogenic activity may be as important as natural ones in mediating cause-specific mortality and disappearance.Importantly, such anthropogenic seasons of higher mortality need not be specific to the animals being studied, especially if the species is controversial and much mortality illegal: our anthropogenic seasons consist of state hunting and hounding seasons for species other than wolves (i.e., deer or bear hunting, and hounding; not wolf hunting), but that mediate human activity on the landscape during those seasons. Our results support the hypothesis that increases in poaching risk during hunting seasons may be attributable to the surge of individuals with inclination to poach on the landscape14,18,29. Alternatively, it could also suggest enhanced criminal activity of a few poachers during the same periods. We temper this increase in poaching risk by establishing snow cover as a major environmental factor strongly associated with poaching. Moreover, our time-to-event analyses illuminate how to evaluate the effects that such anthropogenic seasons may have on risk of mortality and disappearance of monitored animals throughout their lifetime, and how considering such seasons may elucidate the mechanisms behind anthropogenic mortality and disappearance.Additionally, our analysis period precedes and completely excludes any established public wolf hunting seasons. Hence, our modeled anthropogenic seasons represent the periods of most relevant anthropogenic activity for wolves, as hypothesized by other studies14,29,33 and suggested by social science studies on inclinations to poach self-reported by both deer hunters and bear hunters, as well as acceptance of poaching by hunters and farmers30,31,32.Our analyses show increases in the hazard of disappearances of collared wolves (LTF) relative to the baseline period (which excludes environmental and anthropogenic risks) for all seasons. The highest hazard of LTF occurs during the snow season, whereas increases in hazard are lower (and similar) for the two seasons that included hounding and hunting. LTF may experience changes in hazard due to changes in the hazard of any/all of its components: migration, collar failure, or cryptic poaching.Constant and steep increases in LTF hazard throughout a wolf’s lifetime suggests mechanisms other than migration regulating LTF hazard, given migration for adults is most frequent by yearlings and younger adults, around 1.5 to 2.2 years34,35,36. Moreover, only migration out of state would end monitoring, not routine extraterritorial movements of radio-collared wolves. That our seasonal LTF curves depict the cumulative hazards more than doubling beyond those t generally associated with dispersal (~ t  More