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      in Environment

      Using seismology for groundwater management

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      As climate change increases the number of extreme weather events, such as megadroughts, groundwater management is key for sustaining water supply. But current groundwater monitoring tools are either costly or insufficient for deeper aquifers, limiting our ability to monitor and practice sustainable management in populated areas.

      Now, a new paper published in Nature Communications bridges seismology and hydrology with a pilot application that uses seismometers as a cost-effective way to monitor and map groundwater fluctuations.

      “Our measurements are independent from and complementary to traditional observations,” says Shujuan Mao PhD ’21, lead author on the paper. “It provides a new way to dictate groundwater management and evaluate the impact of human activity on shaping underground hydrologic systems.”

      Mao, currently a Thompson Postdoctoral Fellow in the Geophysics department at Stanford University, conducted most of the research during her PhD in MIT’s Department of Earth, Atmospheric and Planetary Sciences (EAPS). Other contributors to the paper include EAPS department chair and Schlumberger Professor of Earth and Planetary Sciences Robert van der Hilst, as well as Michel Campillo and Albanne Lecointre from the Institut des Sciences de la Terre in France.

      While there are a few different methods currently used for measuring groundwater, they all come with notable drawbacks. Hydraulic heads, which drill through the ground and into the aquifers, are expensive and can only give limited information at the specific location they’re placed. Noninvasive techniques based on satellite- or airborne-sensing lack the sensitivity and resolution needed to observe deeper depths.

      Mao proposes using seismometers, which are instruments used to measure ground vibrations such as the waves produced by earthquakes. They can measure seismic velocity, which is the propagation speed of seismic waves. Seismic velocity measurements are unique to the mechanical state of rocks, or the ways rocks respond to their physical environment, and can tell us a lot about them.

      The idea of using seismic velocity to characterize property changes in rocks has long been used in laboratory-scale analysis, but only recently have scientists been able to measure it continuously in realistic-scale geological settings. For aquifer monitoring, Mao and her team associate the seismic velocity with the hydraulic property, or the water content, in the rocks.

      Seismic velocity measurements make use of ambient seismic fields, or background noise, recorded by seismometers. “The Earth’s surface is always vibrating, whether due to ocean waves, winds, or human activities,” she explains. “Most of the time those vibrations are really small and are considered ‘noise’ by traditional seismologists. But in recent years scientists have shown that the continuous noise records in fact contain a wealth of information about the properties and structures of the Earth’s interior.”

      To extract useful information from the noise records, Mao and her team used a technique called seismic interferometry, which analyzes wave interference to calculate the seismic velocity of the medium the waves pass through. For their pilot application, Mao and her team applied this analysis to basins in the Metropolitan Los Angeles region, an area suffering from worsening drought and a growing population.

      By doing this, Mao and her team were able to see how the aquifers changed physically over time at a high resolution. Their seismic velocity measurements verified measurements taken by hydraulic heads over the last 20 years, and the images matched very well with satellite data. They could also see differences in how the storage areas changed between counties in the area that used different water pumping practices, which is important for developing water management protocol.

      Mao also calls using the seismometers a “buy-one get-one free” deal, since seismometers are already in use for earthquake and tectonic studies not just across California, but worldwide, and could help “avoid the expensive cost of drilling and maintaining dedicated groundwater monitoring wells,” she says.

      Mao emphasizes that this study is just the beginning of exploring possible applications of seismic noise interferometry in this way. It can be used to monitor other near-surface systems, such as geothermal or volcanic systems, and Mao is currently applying it to oil and gas fields. But in places like California currently experiencing megadroughts, and who rely on groundwater for a large portion of their water needs, this kind of information is key for sustainable water management.

      “It’s really important, especially now, to characterize these changes in groundwater storage so that we can promote data-informed policymaking to help them thrive under increasing water stress,” she says.

      This study was funded, in part, by the European Research Council, with additional support from the Thompson Fellowship at Stanford University. More

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      in Environment

      Cracking the case of Arctic sea ice breakup

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      Despite its below-freezing temperatures, the Arctic is warming twice as fast as the rest of the planet. As Arctic sea ice melts, fewer bright surfaces are available to reflect sunlight back into space. When fractures open in the ice cover, the water underneath gets exposed. Dark, ice-free water absorbs the sun’s energy, heating the ocean and driving further melting — a vicious cycle. This warming in turn melts glacial ice, contributing to rising sea levels.

      Warming climate and rising sea levels endanger the nearly 40 percent of the U.S. population living in coastal areas, the billions of people who depend on the ocean for food and their livelihoods, and species such as polar bears and Artic foxes. Reduced ice coverage is also making the once-impassable region more accessible, opening up new shipping lanes and ports. Interest in using these emerging trans-Arctic routes for product transit, extraction of natural resources (e.g., oil and gas), and military activity is turning an area traditionally marked by low tension and cooperation into one of global geopolitical competition.

      As the Arctic opens up, predicting when and where the sea ice will fracture becomes increasingly important in strategic decision-making. However, huge gaps exist in our understanding of the physical processes contributing to ice breakup. Researchers at MIT Lincoln Laboratory seek to help close these gaps by turning a data-sparse environment into a data-rich one. They envision deploying a distributed set of unattended sensors across the Arctic that will persistently detect and geolocate ice fracturing events. Concurrently, the network will measure various environmental conditions, including water temperature and salinity, wind speed and direction, and ocean currents at different depths. By correlating these fracturing events and environmental conditions, they hope to discover meaningful insights about what is causing the sea ice to break up. Such insights could help predict the future state of Arctic sea ice to inform climate modeling, climate change planning, and policy decision-making at the highest levels.

      “We’re trying to study the relationship between ice cracking, climate change, and heat flow in the ocean,” says Andrew March, an assistant leader of Lincoln Laboratory’s Advanced Undersea Systems and Technology Group. “Do cracks in the ice cause warm water to rise and more ice to melt? Do undersea currents and waves cause cracking? Does cracking cause undersea waves? These are the types of questions we aim to investigate.”

      Arctic access

      In March 2022, Ben Evans and Dave Whelihan, both researchers in March’s group, traveled for 16 hours across three flights to Prudhoe Bay, located on the North Slope of Alaska. From there, they boarded a small specialized aircraft and flew another 90 minutes to a three-and-a-half-mile-long sheet of ice floating 160 nautical miles offshore in the Arctic Ocean. In the weeks before their arrival, the U.S. Navy’s Arctic Submarine Laboratory had transformed this inhospitable ice floe into a temporary operating base called Ice Camp Queenfish, named after the first Sturgeon-class submarine to operate under the ice and the fourth to reach the North Pole. The ice camp featured a 2,500-foot-long runway, a command center, sleeping quarters to accommodate up to 60 personnel, a dining tent, and an extremely limited internet connection.

      At Queenfish, for the next four days, Evans and Whelihan joined U.S. Navy, Army, Air Force, Marine Corps, and Coast Guard members, and members of the Royal Canadian Air Force and Navy and United Kingdom Royal Navy, who were participating in Ice Exercise (ICEX) 2022. Over the course of about three weeks, more than 200 personnel stationed at Queenfish, Prudhoe Bay, and aboard two U.S. Navy submarines participated in this biennial exercise. The goals of ICEX 2022 were to assess U.S. operational readiness in the Arctic; increase our country’s experience in the region; advance our understanding of the Arctic environment; and continue building relationships with other services, allies, and partner organizations to ensure a free and peaceful Arctic. The infrastructure provided for ICEX concurrently enables scientists to conduct research in an environment — either in person or by sending their research equipment for exercise organizers to deploy on their behalf — that would be otherwise extremely difficult and expensive to access.

      In the Arctic, windchill temperatures can plummet to as low as 60 degrees Fahrenheit below zero, cold enough to freeze exposed skin within minutes. Winds and ocean currents can drift the entire camp beyond the reach of nearby emergency rescue aircraft, and the ice can crack at any moment. To ensure the safety of participants, a team of Navy meteorological specialists continually monitors the ever-changing conditions. The original camp location for ICEX 2022 had to be evacuated and relocated after a massive crack formed in the ice, delaying Evans’ and Whelihan’s trip. Even the newly selected site had a large crack form behind the camp and another crack that necessitated moving a number of tents.

      “Such cracking events are only going to increase as the climate warms, so it’s more critical now than ever to understand the physical processes behind them,” Whelihan says. “Such an understanding will require building technology that can persist in the environment despite these incredibly harsh conditions. So, it’s a challenge not only from a scientific perspective but also an engineering one.”

      “The weather always gets a vote, dictating what you’re able to do out here,” adds Evans. “The Arctic Submarine Laboratory does a lot of work to construct the camp and make it a safe environment where researchers like us can come to do good science. ICEX is really the only opportunity we have to go onto the sea ice in a place this remote to collect data.”

      A legacy of sea ice experiments

      Though this trip was Whelihan’s and Evans’ first to the Arctic region, staff from the laboratory’s Advanced Undersea Systems and Technology Group have been conducting experiments at ICEX since 2018. However, because of the Arctic’s remote location and extreme conditions, data collection has rarely been continuous over long periods of time or widespread across large areas. The team now hopes to change that by building low-cost, expendable sensing platforms consisting of co-located devices that can be left unattended for automated, persistent, near-real-time monitoring. 

      “The laboratory’s extensive expertise in rapid prototyping, seismo-acoustic signal processing, remote sensing, and oceanography make us a natural fit to build this sensor network,” says Evans.

      In the months leading up to the Arctic trip, the team collected seismometer data at Firepond, part of the laboratory’s Haystack Observatory site in Westford, Massachusetts. Through this local data collection, they aimed to gain a sense of what anthropogenic (human-induced) noise would look like so they could begin to anticipate the kinds of signatures they might see in the Arctic. They also collected ice melting/fracturing data during a thaw cycle and correlated these data with the weather conditions (air temperature, humidity, and pressure). Through this analysis, they detected an increase in seismic signals as the temperature rose above 32 F — an indication that air temperature and ice cracking may be related.

      A sensing network

      At ICEX, the team deployed various commercial off-the-shelf sensors and new sensors developed by the laboratory and University of New Hampshire (UNH) to assess their resiliency in the frigid environment and to collect an initial dataset.

      “One aspect that differentiates these experiments from those of the past is that we concurrently collected seismo-acoustic data and environmental parameters,” says Evans.

      The commercial technologies were seismometers to detect the vibrational energy released when sea ice fractures or collides with other ice floes; a hydrophone (underwater microphone) array to record the acoustic energy created by ice-fracturing events; a sound speed profiler to measure the speed of sound through the water column; and a conductivity, temperature, and depth (CTD) profiler to measure the salinity (related to conductivity), temperature, and pressure (related to depth) throughout the water column. The speed of sound in the ocean primarily depends on these three quantities. 

      To precisely measure the temperature across the entire water column at one location, they deployed an array of transistor-based temperature sensors developed by the laboratory’s Advanced Materials and Microsystems Group in collaboration with the Advanced Functional Fabrics of America Manufacturing Innovation Institute. The small temperature sensors run along the length of a thread-like polymer fiber embedded with multiple conductors. This fiber platform, which can support a broad range of sensors, can be unspooled hundreds of feet below the water’s surface to concurrently measure temperature or other water properties — the fiber deployed in the Arctic also contained accelerometers to measure depth — at many points in the water column. Traditionally, temperature profiling has required moving a device up and down through the water column.

      The team also deployed a high-frequency echosounder supplied by Anthony Lyons and Larry Mayer, collaborators at UNH’s Center for Coastal and Ocean Mapping. This active sonar uses acoustic energy to detect internal waves, or waves occurring beneath the ocean’s surface.

      “You may think of the ocean as a homogenous body of water, but it’s not,” Evans explains. “Different currents can exist as you go down in depth, much like how you can get different winds when you go up in altitude. The UNH echosounder allows us to see the different currents in the water column, as well as ice roughness when we turn the sensor to look upward.”

      “The reason we care about currents is that we believe they will tell us something about how warmer water from the Atlantic Ocean is coming into contact with sea ice,” adds Whelihan. “Not only is that water melting ice but it also has lower salt content, resulting in oceanic layers and affecting how long ice lasts and where it lasts.”

      Back home, the team has begun analyzing their data. For the seismic data, this analysis involves distinguishing any ice events from various sources of anthropogenic noise, including generators, snowmobiles, footsteps, and aircraft. Similarly, the researchers know their hydrophone array acoustic data are contaminated by energy from a sound source that another research team participating in ICEX placed in the water. Based on their physics, icequakes — the seismic events that occur when ice cracks — have characteristic signatures that can be used to identify them. One approach is to manually find an icequake and use that signature as a guide for finding other icequakes in the dataset.

      From their water column profiling sensors, they identified an interesting evolution in the sound speed profile 30 to 40 meters below the ocean surface, related to a mass of colder water moving in later in the day. The group’s physical oceanographer believes this change in the profile is due to water coming up from the Bering Sea, water that initially comes from the Atlantic Ocean. The UNH-supplied echosounder also generated an interesting signal at a similar depth.

      “Our supposition is that this result has something to do with the large sound speed variation we detected, either directly because of reflections off that layer or because of plankton, which tend to rise on top of that layer,” explains Evans.  

      A future predictive capability

      Going forward, the team will continue mining their collected data and use these data to begin building algorithms capable of automatically detecting and localizing — and ultimately predicting — ice events correlated with changes in environmental conditions. To complement their experimental data, they have initiated conversations with organizations that model the physical behavior of sea ice, including the National Oceanic and Atmospheric Administration and the National Ice Center. Merging the laboratory’s expertise in sensor design and signal processing with their expertise in ice physics would provide a more complete understanding of how the Arctic is changing.

      The laboratory team will also start exploring cost-effective engineering approaches for integrating the sensors into packages hardened for deployment in the harsh environment of the Arctic.

      “Until these sensors are truly unattended, the human factor of usability is front and center,” says Whelihan. “Because it’s so cold, equipment can break accidentally. For example, at ICEX 2022, our waterproof enclosure for the seismometers survived, but the enclosure for its power supply, which was made out of a cheaper plastic, shattered in my hand when I went to pick it up.”

      The sensor packages will not only need to withstand the frigid environment but also be able to “phone home” over some sort of satellite data link and sustain their power. The team plans to investigate whether waste heat from processing can keep the instruments warm and how energy could be harvested from the Arctic environment.

      Before the next ICEX scheduled for 2024, they hope to perform preliminary testing of their sensor packages and concepts in Arctic-like environments. While attending ICEX 2022, they engaged with several other attendees — including the U.S. Navy, Arctic Submarine Laboratory, National Ice Center, and University of Alaska Fairbanks (UAF) — and identified cold room experimentation as one area of potential collaboration. Testing can also be performed at outdoor locations a bit closer to home and more easily accessible, such as the Great Lakes in Michigan and a UAF-maintained site in Barrow, Alaska. In the future, the laboratory team may have an opportunity to accompany U.S. Coast Guard personnel on ice-breaking vessels traveling from Alaska to Greenland. The team is also thinking about possible venues for collecting data far removed from human noise sources.

      “Since I’ve told colleagues, friends, and family I was going to the Arctic, I’ve had a lot of interesting conversations about climate change and what we’re doing there and why we’re doing it,” Whelihan says. “People don’t have an intrinsic, automatic understanding of this environment and its impact because it’s so far removed from us. But the Arctic plays a crucial role in helping to keep the global climate in balance, so it’s imperative we understand the processes leading to sea ice fractures.”

      This work is funded through Lincoln Laboratory’s internally administered R&D portfolio on climate. More

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      in Environment

      MIT J-WAFS announces 2022 seed grant recipients

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      The Abdul Latif Jameel Water and Food Systems Lab (J-WAFS) at MIT has awarded eight MIT principal investigators with 2022 J-WAFS seed grants. The grants support innovative MIT research that has the potential to have significant impact on water- and food-related challenges.

      The only program at MIT that is dedicated to water- and food-related research, J-WAFS has offered seed grant funding to MIT principal investigators and their teams for the past eight years. The grants provide up to $75,000 per year, overhead-free, for two years to support new, early-stage research in areas such as water and food security, safety, supply, and sustainability. Past projects have spanned many diverse disciplines, including engineering, science, technology, and business innovation, as well as social science and economics, architecture, and urban planning. 

      Seven new projects led by eight researchers will be supported this year. With funding going to four different MIT departments, the projects address a range of challenges by employing advanced materials, technology innovations, and new approaches to resource management. The new projects aim to remove harmful chemicals from water sources, develop drought monitoring systems for farmers, improve management of the shellfish industry, optimize water purification materials, and more.

      “Climate change, the pandemic, and most recently the war in Ukraine have exacerbated and put a spotlight on the serious challenges facing global water and food systems,” says J-WAFS director John H. Lienhard. He adds, “The proposals chosen this year have the potential to create measurable, real-world impacts in both the water and food sectors.”  

      The 2022 J-WAFS seed grant researchers and their projects are:

      Gang Chen, the Carl Richard Soderberg Professor of Power Engineering in MIT’s Department of Mechanical Engineering, is using sunlight to desalinate water. The use of solar energy for desalination is not a new idea, particularly solar thermal evaporation methods. However, the solar thermal evaporation process has an overall low efficiency because it relies on breaking hydrogen bonds among individual water molecules, which is very energy-intensive. Chen and his lab recently discovered a photomolecular effect that dramatically lowers the energy required for desalination. 

      The bonds among water molecules inside a water cluster in liquid water are mostly hydrogen bonds. Chen discovered that a photon with energy larger than the bonding energy between the water cluster and the remaining water liquids can cleave off the water cluster at the water-air interface, colliding with air molecules and disintegrating into 60 or even more individual water molecules. This effect has the potential to significantly boost clean water production via new desalination technology that produces a photomolecular evaporation rate that exceeds pure solar thermal evaporation by at least ten-fold. 

      John E. Fernández is the director of the MIT Environmental Solutions Initiative (ESI) and a professor in the Department of Architecture, and also affiliated with the Department of Urban Studies and Planning. Fernández is working with Scott D. Odell, a postdoc in the ESI, to better understand the impacts of mining and climate change in water-stressed regions of Chile.

      The country of Chile is one of the world’s largest exporters of both agricultural and mineral products; however, little research has been done on climate change effects at the intersection of these two sectors. Fernández and Odell will explore how desalination is being deployed by the mining industry to relieve pressure on continental water supplies in Chile, and with what effect. They will also research how climate change and mining intersect to affect Andean glaciers and agricultural communities dependent upon them. The researchers intend for this work to inform policies to reduce social and environmental harms from mining, desalination, and climate change.

      Ariel L. Furst is the Raymond (1921) and Helen St. Laurent Career Development Professor of Chemical Engineering at MIT. Her 2022 J-WAFS seed grant project seeks to effectively remove dangerous and long-lasting chemicals from water supplies and other environmental areas. 

      Perfluorooctanoic acid (PFOA), a component of Teflon, is a member of a group of chemicals known as per- and polyfluoroalkyl substances (PFAS). These human-made chemicals have been extensively used in consumer products like nonstick cooking pans. Exceptionally high levels of PFOA have been measured in water sources near manufacturing sites, which is problematic as these chemicals do not readily degrade in our bodies or the environment. The majority of humans have detectable levels of PFAS in their blood, which can lead to significant health issues including cancer, liver damage, and thyroid effects, as well as developmental effects in infants. Current remediation methods are limited to inefficient capture and are mostly confined to laboratory settings. Furst’s proposed method utilizes low-energy, scaffolded enzyme materials to move beyond simple capture to degrade these hazardous pollutants.

      Heather J. Kulik is an associate professor in the Department of Chemical Engineering at MIT who is developing novel computational strategies to identify optimal materials for purifying water. Water treatment requires purification by selectively separating small ions from water. However, human-made, scalable materials for water purification and desalination are often not stable in typical operating conditions and lack precision pores for good separation. 

      Metal-organic frameworks (MOFs) are promising materials for water purification because their pores can be tailored to have precise shapes and chemical makeup for selective ion affinity. Yet few MOFs have been assessed for their properties relevant to water purification. Kulik plans to use virtual high-throughput screening accelerated by machine learning models and molecular simulation to accelerate discovery of MOFs. Specifically, Kulik will be looking for MOFs with ultra-stable structures in water that do not break down at certain temperatures. 

      Gregory C. Rutledge is the Lammot du Pont Professor of Chemical Engineering at MIT. He is leading a project that will explore how to better separate oils from water. This is an important problem to solve given that industry-generated oil-contaminated water is a major source of pollution to the environment.

      Emulsified oils are particularly challenging to remove from water due to their small droplet sizes and long settling times. Microfiltration is an attractive technology for the removal of emulsified oils, but its major drawback is fouling, or the accumulation of unwanted material on solid surfaces. Rutledge will examine the mechanism of separation behind liquid-infused membranes (LIMs) in which an infused liquid coats the surface and pores of the membrane, preventing fouling. Robustness of the LIM technology for removal of different types of emulsified oils and oil mixtures will be evaluated. César Terrer is an assistant professor in the Department of Civil and Environmental Engineering whose J-WAFS project seeks to answer the question: How can satellite images be used to provide a high-resolution drought monitoring system for farmers? 

      Drought is recognized as one of the world’s most pressing issues, with direct impacts on vegetation that threaten water resources and food production globally. However, assessing and monitoring the impact of droughts on vegetation is extremely challenging as plants’ sensitivity to lack of water varies across species and ecosystems. Terrer will leverage a new generation of remote sensing satellites to provide high-resolution assessments of plant water stress at regional to global scales. The aim is to provide a plant drought monitoring product with farmland-specific services for water and socioeconomic management.

      Michael Triantafyllou is the Henry L. and Grace Doherty Professor in Ocean Science and Engineering in the Department of Mechanical Engineering. He is developing a web-based system for natural resources management that will deploy geospatial analysis, visualization, and reporting to better manage and facilitate aquaculture data.  By providing value to commercial fisheries’ permit holders who employ significant numbers of people and also to recreational shellfish permit holders who contribute to local economies, the project has attracted support from the Massachusetts Division of Marine Fisheries as well as a number of local resource management departments.

      Massachusetts shell fisheries generated roughly $339 million in 2020, accounting for 17 percent of U.S. East Coast production. Managing such a large industry is a time-consuming process, given there are thousands of acres of coastal areas grouped within over 800 classified shellfish growing areas. Extreme climate events present additional challenges. Triantafyllou’s research will help efforts to enforce environmental regulations, support habitat restoration efforts, and prevent shellfish-related food safety issues. More

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      in Environment

      Understanding air pollution from space

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      Climate change and air pollution are interlocking crises that threaten human health. Reducing emissions of some air pollutants can help achieve climate goals, and some climate mitigation efforts can in turn improve air quality.

      One part of MIT Professor Arlene Fiore’s research program is to investigate the fundamental science in understanding air pollutants — how long they persist and move through our environment to affect air quality.

      “We need to understand the conditions under which pollutants, such as ozone, form. How much ozone is formed locally and how much is transported long distances?” says Fiore, who notes that Asian air pollution can be transported across the Pacific Ocean to North America. “We need to think about processes spanning local to global dimensions.”

      Fiore, the Peter H. Stone and Paola Malanotte Stone Professor in Earth, Atmospheric and Planetary Sciences, analyzes data from on-the-ground readings and from satellites, along with models, to better understand the chemistry and behavior of air pollutants — which ultimately can inform mitigation strategies and policy setting.

      A global concern

      At the United Nations’ most recent climate change conference, COP26, air quality management was a topic discussed over two days of presentations.

      “Breathing is vital. It’s life. But for the vast majority of people on this planet right now, the air that they breathe is not giving life, but cutting it short,” said Sarah Vogel, senior vice president for health at the Environmental Defense Fund, at the COP26 session.

      “We need to confront this twin challenge now through both a climate and clean air lens, of targeting those pollutants that warm both the air and harm our health.”

      Earlier this year, the World Health Organization (WHO) updated its global air quality guidelines it had issued 15 years earlier for six key pollutants including ozone (O3), nitrogen dioxide (NO2), sulfur dioxide (SO2), and carbon monoxide (CO). The new guidelines are more stringent based on what the WHO stated is the “quality and quantity of evidence” of how these pollutants affect human health. WHO estimates that roughly 7 million premature deaths are attributable to the joint effects of air pollution.

      “We’ve had all these health-motivated reductions of aerosol and ozone precursor emissions. What are the implications for the climate system, both locally but also around the globe? How does air quality respond to climate change? We study these two-way interactions between air pollution and the climate system,” says Fiore.

      But fundamental science is still required to understand how gases, such as ozone and nitrogen dioxide, linger and move throughout the troposphere — the lowermost layer of our atmosphere, containing the air we breathe.

      “We care about ozone in the air we’re breathing where we live at the Earth’s surface,” says Fiore. “Ozone reacts with biological tissue, and can be damaging to plants and human lungs. Even if you’re a healthy adult, if you’re out running hard during an ozone smog event, you might feel an extra weight on your lungs.”

      Telltale signs from space

      Ozone is not emitted directly, but instead forms through chemical reactions catalyzed by radiation from the sun interacting with nitrogen oxides — pollutants released in large part from burning fossil fuels—and volatile organic compounds. However, current satellite instruments cannot sense ground-level ozone.

      “We can’t retrieve surface- or even near-surface ozone from space,” says Fiore of the satellite data, “although the anticipated launch of a new instrument looks promising for new advances in retrieving lower-tropospheric ozone”. Instead, scientists can look at signatures from other gas emissions to get a sense of ozone formation. “Nitrogen dioxide and formaldehyde are a heavy focus of our research because they serve as proxies for two of the key ingredients that go on to form ozone in the atmosphere.”

      To understand ozone formation via these precursor pollutants, scientists have gathered data for more than two decades using spectrometer instruments aboard satellites that measure sunlight in ultraviolet and visible wavelengths that interact with these pollutants in the Earth’s atmosphere — known as solar backscatter radiation.

      Satellites, such as NASA’s Aura, carry instruments like the Ozone Monitoring Instrument (OMI). OMI, along with European-launched satellites such as the Global Ozone Monitoring Experiment (GOME) and the Scanning Imaging Absorption spectroMeter for Atmospheric CartograpHY (SCIAMACHY), and the newest generation TROPOspheric Monitoring instrument (TROPOMI), all orbit the Earth, collecting data during daylight hours when sunlight is interacting with the atmosphere over a particular location.

      In a recent paper from Fiore’s group, former graduate student Xiaomeng Jin (now a postdoc at the University of California at Berkeley), demonstrated that she could bring together and “beat down the noise in the data,” as Fiore says, to identify trends in ozone formation chemistry over several U.S. metropolitan areas that “are consistent with our on-the-ground understanding from in situ ozone measurements.”

      “This finding implies that we can use these records to learn about changes in surface ozone chemistry in places where we lack on-the-ground monitoring,” says Fiore. Extracting these signals by stringing together satellite data — OMI, GOME, and SCIAMACHY — to produce a two-decade record required reconciling the instruments’ differing orbit days, times, and fields of view on the ground, or spatial resolutions. 

      Currently, spectrometer instruments aboard satellites are retrieving data once per day. However, newer instruments, such as the Geostationary Environment Monitoring Spectrometer launched in February 2020 by the National Institute of Environmental Research in the Ministry of Environment of South Korea, will monitor a particular region continuously, providing much more data in real time.

      Over North America, the Tropospheric Emissions: Monitoring of Pollution Search (TEMPO) collaboration between NASA and the Smithsonian Astrophysical Observatory, led by Kelly Chance of Harvard University, will provide not only a stationary view of the atmospheric chemistry over the continent, but also a finer-resolution view — with the instrument recording pollution data from only a few square miles per pixel (with an anticipated launch in 2022).

      “What we’re very excited about is the opportunity to have continuous coverage where we get hourly measurements that allow us to follow pollution from morning rush hour through the course of the day and see how plumes of pollution are evolving in real time,” says Fiore.

      Data for the people

      Providing Earth-observing data to people in addition to scientists — namely environmental managers, city planners, and other government officials — is the goal for the NASA Health and Air Quality Applied Sciences Team (HAQAST).

      Since 2016, Fiore has been part of HAQAST, including collaborative “tiger teams” — projects that bring together scientists, nongovernment entities, and government officials — to bring data to bear on real issues.

      For example, in 2017, Fiore led a tiger team that provided guidance to state air management agencies on how satellite data can be incorporated into state implementation plans (SIPs). “Submission of a SIP is required for any state with a region in non-attainment of U.S. National Ambient Air Quality Standards to demonstrate their approach to achieving compliance with the standard,” says Fiore. “What we found is that small tweaks in, for example, the metrics we use to convey the science findings, can go a long way to making the science more usable, especially when there are detailed policy frameworks in place that must be followed.”

      Now, in 2021, Fiore is part of two tiger teams announced by HAQAST in late September. One team is looking at data to address environmental justice issues, by providing data to assess communities disproportionately affected by environmental health risks. Such information can be used to estimate the benefits of governmental investments in environmental improvements for disproportionately burdened communities. The other team is looking at urban emissions of nitrogen oxides to try to better quantify and communicate uncertainties in the estimates of anthropogenic sources of pollution.

      “For our HAQAST work, we’re looking at not just the estimate of the exposure to air pollutants, or in other words their concentrations,” says Fiore, “but how confident are we in our exposure estimates, which in turn affect our understanding of the public health burden due to exposure. We have stakeholder partners at the New York Department of Health who will pair exposure datasets with health data to help prioritize decisions around public health.

      “I enjoy working with stakeholders who have questions that require science to answer and can make a difference in their decisions.” Fiore says. More

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      in Security

      Scientists build new atlas of ocean’s oxygen-starved waters

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      Life is teeming nearly everywhere in the oceans, except in certain pockets where oxygen naturally plummets and waters become unlivable for most aerobic organisms. These desolate pools are “oxygen-deficient zones,” or ODZs. And though they make up less than 1 percent of the ocean’s total volume, they are a significant source of nitrous oxide, a potent greenhouse gas. Their boundaries can also limit the extent of fisheries and marine ecosystems.

      Now MIT scientists have generated the most detailed, three-dimensional “atlas” of the largest ODZs in the world. The new atlas provides high-resolution maps of the two major, oxygen-starved bodies of water in the tropical Pacific. These maps reveal the volume, extent, and varying depths of each ODZ, along with fine-scale features, such as ribbons of oxygenated water that intrude into otherwise depleted zones.

      The team used a new method to process over 40 years’ worth of ocean data, comprising nearly 15 million measurements taken by many research cruises and autonomous robots deployed across the tropical Pacific. The researchers compiled then analyzed this vast and fine-grained data to generate maps of oxygen-deficient zones at various depths, similar to the many slices of a three-dimensional scan.

      From these maps, the researchers estimated the total volume of the two major ODZs in the tropical Pacific, more precisely than previous efforts. The first zone, which stretches out from the coast of South America, measures about 600,000 cubic kilometers — roughly the volume of water that would fill 240 billion Olympic-sized pools. The second zone, off the coast of Central America, is roughly three times larger.

      The atlas serves as a reference for where ODZs lie today. The team hopes scientists can add to this atlas with continued measurements, to better track changes in these zones and predict how they may shift as the climate warms.

      “It’s broadly expected that the oceans will lose oxygen as the climate gets warmer. But the situation is more complicated in the tropics where there are large oxygen-deficient zones,” says Jarek Kwiecinski ’21, who developed the atlas along with Andrew Babbin, the Cecil and Ida Green Career Development Professor in MIT’s Department of Earth, Atmospheric and Planetary Sciences. “It’s important to create a detailed map of these zones so we have a point of comparison for future change.”

      The team’s study appears today in the journal Global Biogeochemical Cycles.

      Airing out artifacts

      Oxygen-deficient zones are large, persistent regions of the ocean that occur naturally, as a consequence of marine microbes gobbling up sinking phytoplankton along with all the available oxygen in the surroundings. These zones happen to lie in regions that miss passing ocean currents, which would normally replenish regions with oxygenated water. As a result, ODZs are locations of relatively permanent, oxygen-depleted waters, and can exist at mid-ocean depths of between roughly 35 to 1,000 meters below the surface. For some perspective, the oceans on average run about 4,000 meters deep.

      Over the last 40 years, research cruises have explored these regions by dropping bottles down to various depths and hauling up seawater that scientists then measure for oxygen.

      “But there are a lot of artifacts that come from a bottle measurement when you’re trying to measure truly zero oxygen,” Babbin says. “All the plastic that we deploy at depth is full of oxygen that can leach out into the sample. When all is said and done, that artificial oxygen inflates the ocean’s true value.”

      Rather than rely on measurements from bottle samples, the team looked at data from sensors attached to the outside of the bottles or integrated with robotic platforms that can change their buoyancy to measure water at different depths. These sensors measure a variety of signals, including changes in electrical currents or the intensity of light emitted by a photosensitive dye to estimate the amount of oxygen dissolved in water. In contrast to seawater samples that represent a single discrete depth, the sensors record signals continuously as they descend through the water column.

      Scientists have attempted to use these sensor data to estimate the true value of oxygen concentrations in ODZs, but have found it incredibly tricky to convert these signals accurately, particularly at concentrations approaching zero.

      “We took a very different approach, using measurements not to look at their true value, but rather how that value changes within the water column,” Kwiecinski says. “That way we can identify anoxic waters, regardless of what a specific sensor says.”

      Bottoming out

      The team reasoned that, if sensors showed a constant, unchanging value of oxygen in a continuous, vertical section of the ocean, regardless of the true value, then it would likely be a sign that oxygen had bottomed out, and that the section was part of an oxygen-deficient zone.

      The researchers brought together nearly 15 million sensor measurements collected over 40 years by various research cruises and robotic floats, and mapped the regions where oxygen did not change with depth.

      “We can now see how the distribution of anoxic water in the Pacific changes in three dimensions,” Babbin says. 

      The team mapped the boundaries, volume, and shape of two major ODZs in the tropical Pacific, one in the Northern Hemisphere, and the other in the Southern Hemisphere. They were also able to see fine details within each zone. For instance, oxygen-depleted waters are “thicker,” or more concentrated towards the middle, and appear to thin out toward the edges of each zone.

      “We could also see gaps, where it looks like big bites were taken out of anoxic waters at shallow depths,” Babbin says. “There’s some mechanism bringing oxygen into this region, making it oxygenated compared to the water around it.”

      Such observations of the tropical Pacific’s oxygen-deficient zones are more detailed than what’s been measured to date.

      “How the borders of these ODZs are shaped, and how far they extend, could not be previously resolved,” Babbin says. “Now we have a better idea of how these two zones compare in terms of areal extent and depth.”

      “This gives you a sketch of what could be happening,” Kwiecinski says. “There’s a lot more one can do with this data compilation to understand how the ocean’s oxygen supply is controlled.”

      This research is supported, in part, by the Simons Foundation. More

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      Researchers design sensors to rapidly detect plant hormones

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      Researchers from the Disruptive and Sustainable Technologies for Agricultural Precision (DiSTAP) interdisciplinary research group of the Singapore-MIT Alliance for Research and Technology (SMART), MIT’s research enterprise in Singapore, and their local collaborators from Temasek Life Sciences Laboratory (TLL) and Nanyang Technological University (NTU), have developed the first-ever nanosensor to enable rapid testing of synthetic auxin plant hormones. The novel nanosensors are safer and less tedious than existing techniques for testing plants’ response to compounds such as herbicide, and can be transformative in improving agricultural production and our understanding of plant growth.

      The scientists designed sensors for two plant hormones — 1-naphthalene acetic acid (NAA) and 2,4-dichlorophenoxyacetic acid (2,4-D) — which are used extensively in the farming industry for regulating plant growth and as herbicides, respectively. Current methods to detect NAA and 2,4-D cause damage to plants, and are unable to provide real-time in vivo monitoring and information.

      Based on the concept of corona phase molecular recognition (​​CoPhMoRe) pioneered by the Strano Lab at SMART DiSTAP and MIT, the new sensors are able to detect the presence of NAA and 2,4-D in living plants at a swift pace, providing plant information in real-time, without causing any harm. The team has successfully tested both sensors on a number of everyday crops including pak choi, spinach, and rice across various planting mediums such as soil, hydroponic, and plant tissue culture.

      Explained in a paper titled “Nanosensor Detection of Synthetic Auxins In Planta using Corona Phase Molecular Recognition” published in the journal ACS Sensors, the research can facilitate more efficient use of synthetic auxins in agriculture and hold tremendous potential to advance plant biology study.

      “Our CoPhMoRe technique has previously been used to detect compounds such as hydrogen peroxide and heavy-metal pollutants like arsenic — but this is the first successful case of CoPhMoRe sensors developed for detecting plant phytohormones that regulate plant growth and physiology, such as sprays to prevent premature flowering and dropping of fruits,” says DiSTAP co-lead principal investigator Michael Strano, the Carbon P. Dubbs Professor of Chemical Engineering at MIT. “This technology can replace current state-of-the-art sensing methods which are laborious, destructive, and unsafe.”

      Of the two sensors developed by the research team, the 2,4-D nanosensor also showed the ability to detect herbicide susceptibility, enabling farmers and agricultural scientists to quickly find out how vulnerable or resistant different plants are to herbicides without the need to monitor crop or weed growth over days. “This could be incredibly beneficial in revealing the mechanism behind how 2,4-D works within plants and why crops develop herbicide resistance,” says DiSTAP and TLL Principal Investigator Rajani Sarojam.

      “Our research can help the industry gain a better understanding of plant growth dynamics and has the potential to completely change how the industry screens for herbicide resistance, eliminating the need to monitor crop or weed growth over days,” says Mervin Chun-Yi Ang, a research scientist at DiSTAP. “It can be applied across a variety of plant species and planting mediums, and could easily be used in commercial setups for rapid herbicide susceptibility testing, such as urban farms.”

      NTU Professor Mary Chan-Park Bee Eng says, “Using nanosensors for in planta detection eliminates the need for extensive extraction and purification processes, which saves time and money. They also use very low-cost electronics, which makes them easily adaptable for commercial setups.”

      The team says their research can lead to future development of real-time nanosensors for other dynamic plant hormones and metabolites in living plants as well.

      The development of the nanosensor, optical detection system, and image processing algorithms for this study was done by SMART, NTU, and MIT, while TLL validated the nanosensors and provided knowledge of plant biology and plant signaling mechanisms. The research is carried out by SMART and supported by NRF under its Campus for Research Excellence And Technological Enterprise (CREATE) program.

      DiSTAP is one of the five interdisciplinary research roups in SMART. The DiSTAP program addresses deep problems in food production in Singapore and the world by developing a suite of impactful and novel analytical, genetic, and biosynthetic technologies. The goal is to fundamentally change how plant biosynthetic pathways are discovered, monitored, engineered, and ultimately translated to meet the global demand for food and nutrients.

      Scientists from MIT, TTL, NTU, and National University of Singapore (NUS) are collaboratively developing new tools for the continuous measurement of important plant metabolites and hormones for novel discovery, deeper understanding and control of plant biosynthetic pathways in ways not yet possible, especially in the context of green leafy vegetables; leveraging these new techniques to engineer plants with highly desirable properties for global food security, including high yield density production, drought, and pathogen resistance and biosynthesis of high-value commercial products; developing tools for producing hydrophobic food components in industry-relevant microbes; developing novel microbial and enzymatic technologies to produce volatile organic compounds that can protect and/or promote growth of leafy vegetables; and applying these technologies to improve urban farming.

      DiSTAP is led by Michael Strano and Singapore co-lead principal investigator Professor Chua Nam Hai.

      SMART was established by MIT, in partnership with the NRF, in 2007. SMART, the first entity in CREATE, serves as an intellectual and innovation hub for research interactions between MIT and Singapore, undertaking cutting-edge research projects in areas of interest to both. SMART currently comprises an Innovation Center and five interdisciplinary research groups: Antimicrobial Resistance (AMR), Critical Analytics for Manufacturing Personalized-Medicine (CAMP), DiSTAP, Future Urban Mobility (FM), and Low Energy Electronic Systems (LEES). SMART is funded by the NRF. More

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      A new way to detect the SARS-CoV-2 Alpha variant in wastewater

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      Researchers from the Antimicrobial Resistance (AMR) interdisciplinary research group at the Singapore-MIT Alliance for Research and Technology (SMART), MIT’s research enterprise in Singapore, alongside collaborators from Biobot Analytics, Nanyang Technological University (NTU), and MIT, have successfully developed an innovative, open-source molecular detection method that is able to detect and quantify the B.1.1.7 (Alpha) variant of SARS-CoV-2. The breakthrough paves the way for rapid, inexpensive surveillance of other SARS-CoV-2 variants in wastewater.

      As the world continues to battle and contain Covid-19, the recent identification of SARS-CoV-2 variants with higher transmissibility and increased severity has made developing convenient variant tracking methods essential. Currently, identified variants include the B.1.17 (Alpha) variant first identified in the United Kingdom and the B.1.617.2 (Delta) variant first detected in India.

      Wastewater surveillance has emerged as a critical public health tool to safely and efficiently track the SARS-CoV-2 pandemic in a non-intrusive manner, providing complementary information that enables health authorities to acquire actionable community-level information. Most recently, viral fragments of SARS-CoV-2 were detected in housing estates in Singapore through a proactive wastewater surveillance program. This information, alongside surveillance testing, allowed Singapore’s Ministry of Health to swiftly respond, isolate, and conduct swab tests as part of precautionary measures.

      However, detecting variants through wastewater surveillance is less commonplace due to challenges in existing technology. Next-generation sequencing for wastewater surveillance is time-consuming and expensive. Tests also lack the sensitivity required to detect low variant abundances in dilute and mixed wastewater samples due to inconsistent and/or low sequencing coverage.

      The method developed by the researchers is uniquely tailored to address these challenges and expands the utility of wastewater surveillance beyond testing for SARS-CoV-2, toward tracking the spread of SARS-CoV-2 variants of concern.

      Wei Lin Lee, research scientist at SMART AMR and first author on the paper adds, “This is especially important in countries battling SARS-CoV-2 variants. Wastewater surveillance will help find out the true proportion and spread of the variants in the local communities. Our method is sensitive enough to detect variants in highly diluted SARS-CoV-2 concentrations typically seen in wastewater samples, and produces reliable results even for samples which contain multiple SARS-CoV-2 lineages.”

      Led by Janelle Thompson, NTU associate professor, and Eric Alm, MIT professor and SMART AMR principal investigator, the team’s study, “Quantitative SARS-CoV-2 Alpha variant B.1.1.7 Tracking in Wastewater by Allele-Specific RT-qPCR” has been published in Environmental Science & Technology Letters. The research explains the innovative, open-source molecular detection method based on allele-specific RT-qPCR that detects and quantifies the B.1.1.7 (Alpha) variant. The developed assay, tested and validated in wastewater samples across 19 communities in the United States, is able to reliably detect and quantify low levels of the B.1.1.7 (Alpha) variant with low cross-reactivity, and at variant proportions down to 1 percent in a background of mixed SARS-CoV-2 viruses.

      Targeting spike protein mutations that are highly predictive of the B.1.1.7 (Alpha) variant, the method can be implemented using commercially available RT-qPCR protocols. Unlike commercially available products that use proprietary primers and probes for wastewater surveillance, the paper details the open-source method and its development that can be freely used by other organizations and research institutes for their work on wastewater surveillance of SARS-CoV-2 and its variants.

      The breakthrough by the research team in Singapore is currently used by Biobot Analytics, an MIT startup and global leader in wastewater epidemiology headquartered in Cambridge, Massachusetts, serving states and localities throughout the United States. Using the method, Biobot Analytics is able to accept and analyze wastewater samples for the B.1.1.7 (Alpha) variant and plans to add additional variants to its analysis as methods are developed. For example, the SMART AMR team is currently developing specific assays that will be able to detect and quantify the B.1.617.2 (Delta) variant, which has recently been identified as a variant of concern by the World Health Organization.

      “Using the team’s innovative method, we have been able to monitor the B.1.1.7 (Alpha) variant in local populations in the U.S. — empowering leaders with information about Covid-19 trends in their communities and allowing them to make considered recommendations and changes to control measures,” says Mariana Matus PhD ’18, Biobot Analytics CEO and co-founder.

      “This method can be rapidly adapted to detect new variants of concern beyond B.1.1.7,” adds MIT’s Alm. “Our partnership with Biobot Analytics has translated our research into real-world impact beyond the shores of Singapore and aid in the detection of Covid-19 and its variants, serving as an early warning system and guidance for policymakers as they trace infection clusters and consider suitable public health measures.”

      The research is carried out by SMART and supported by the National Research Foundation (NRF) Singapore under its Campus for Research Excellence And Technological Enterprise (CREATE) program.

      SMART was established by MIT in partnership with the National Research Foundation of Singapore (NRF) in 2007. SMART is the first entity in CREATE developed by NRF. SMART serves as an intellectual and innovation hub for research interactions between MIT and Singapore, undertaking cutting-edge research projects in areas of interest to both Singapore and MIT. SMART currently comprises an Innovation Center and five IRGs: AMR, Critical Analytics for Manufacturing Personalized-Medicine, Disruptive and Sustainable Technologies for Agricultural Precision, Future Urban Mobility, and Low Energy Electronic Systems.

      The AMR interdisciplinary research group is a translational research and entrepreneurship program that tackles the growing threat of antimicrobial resistance. By leveraging talent and convergent technologies across Singapore and MIT, AMR aims to develop multiple innovative and disruptive approaches to identify, respond to, and treat drug-resistant microbial infections. Through strong scientific and clinical collaborations, its goal is to provide transformative, holistic solutions for Singapore and the world. More