McCauley, D. J. et al. Marine defaunation: Animal loss in the global ocean. Science 347, 1255641 (2015).
Dulvy, N. K. et al. Extinction risk and conservation of the world’s sharks and rays. eLife 3, 590 (2014).
Hutchings, J. A., Myers, R. A., García, V. B., Lucifora, L. O. & Kuparinen, A. Life-history correlates of extinction risk and recovery potential. Ecol. Appl. 22, 1061–1067 (2012).
Frisk, M. & Miller, T. J. Life histories and vulnerability to exploitation of elasmobranchs: Inferences from elasticity, perturbation and phylogenetic analyses. Artic. J. Northwest Atl. Fish. Sci. https://doi.org/10.2960/J.v35.m514 (2005).
Carr, L. A. et al. Illegal shark fishing in the Galápagos Marine Reserve. Mar. Policy 39, 317–321 (2013).
Dharmadi, F. & Satria, F. African Journal of Marine Science Fisheries management and conservation of sharks in Indonesia. Afr. J. Mar. Sci. 37, 249–258 (2015).
Heupel, M., Carlson, J. & Simpfendorfer, C. Shark nursery areas: Concepts, definition, characterization and assumptions. Mar. Ecol. Prog. Ser. 337, 287–297 (2007).
Meylan, P. A., Meylan, A. B. & Gray, J. A. The ecology and migrations of sea turtles 8. Tests of the developmental habitat hypothesis. Bull. Am. Museum Nat. Hist. 357, 1–70 (2011).
Jennings, D. E., Gruber, S. H., Franks, B. R., Kessel, S. T. & Robertson, A. L. Effects of large-scale anthropogenic development on juvenile lemon shark (Negaprion brevirostris) populations of Bimini, Bahamas. Environ. Biol. Fishes 83, 369–377 (2008).
Kinney, M. J. & Simpfendorfer, C. A. Reassessing the value of nursery areas to shark conservation and management. Conserv. Lett. 2, 53–60 (2009).
Healy, T. J., Hill, N. J., Chin, A. & Barnett, A. A global review of elasmobranch tourism activities, management and risk. Mar. Policy 118, 103964 (2020).
White, T. D. et al. Assessing the effectiveness of a large marine protected area for reef shark conservation. Biol. Conserv. 207, 64–71 (2017).
Claudet, J., Loiseau, C., Sostres, M. & Correspondence, M. Z. Underprotected marine protected areas in a global biodiversity hotspot. One Earth https://doi.org/10.1016/j.oneear.2020.03.008 (2020).
Pierce, S. & Norman, B. Rhincodon typus. IUCN Red List Threat. Species e–T19488A2, (2016).
CITES. Convention on international trade in endangered species of wild fauna and flora. Amendments to Appendices I and II of CITES. (2000).
Convention on Migratory Species. Proposal for the inclusion of the whale shark (Rhincodon typus) on Appendix I of the convention CMS convention on migratory species. (2017).
Simpfendorfer, C. A. & Dulvy, N. K. Bright spots of sustainable shark fishing. Curr. Biol. 27, R97–R98 (2017).
Reeve-Arnold, K. E., Kinni, J., Newbigging, R., Pierce, S. J. & Roques, K. Sustaining whale shark tourism in a diminishing population. In (Hamad bin Khalifa University Press, HBKU Press, 2016). https://doi.org/10.5339/qproc.2016.iwsc4.49.
Pravin, P. Whale Shark in the Indian Coast—Need for conservation. Curr. Sci. 79, 310–315 (2000).
Li, W., Wang, Y. & Norman, B. A preliminary survey of whale shark Rhincodon typus catch and trade in China: An emerging crisis. J. Fish Biol. 80, 1608–1618 (2012).
Hearn, A. R. et al. Adult female whale sharks make long-distance movements past Darwin Island (Galapagos, Ecuador) in the Eastern Tropical Pacific. Mar. Biol. 163, 1–12 (2016).
Wilson, S. G., Polovina, J. J., Stewart, B. S. & Meekan, M. G. Movements of whale sharks (Rhincodon typus) tagged at Ningaloo Reef, Western Australia. Mar. Biol. 148, 1157–1166 (2006).
Hueter, R. E., Tyminski, J. P. & de la Parra, R. Horizontal movements, migration patterns, and population structure of whale sharks in the Gulf of Mexico and northwestern Caribbean Sea. PLoS ONE 8, e71883 (2013).
Robinson, D. P. et al. Some like it hot: Repeat migration and residency of whale sharks within an extreme natural environment. PLoS ONE 12, e0185360 (2017).
Araujo, G. et al. Photo-ID and telemetry highlight a global whale shark hotspot in Palawan, Philippines. Sci. Rep. 9, 1–12 (2019).
Bradshaw, C. J. A., Fitzpatrick, B. M., Steinberg, C. C., Brook, B. W. & Meekan, M. G. Decline in whale shark size and abundance at Ningaloo Reef over the past decade: The world’s largest fish is getting smaller. Biol. Conserv. 141, 1894–1905 (2008).
Speed, C. W. et al. Scarring patterns and relative mortality rates of Indian Ocean whale sharks. J. Fish Biol. 72, 1488–1503 (2008).
Lester, E. et al. Multi-year patterns in scarring, survival and residency of whale sharks in Ningaloo Marine Park, Western Australia. Mar. Ecol. Prog. Ser. 634, 115–125 (2020).
Rowat, D. & Brooks, K. S. A review of the biology, fisheries and conservation of the whale shark Rhincodon typus. J. Fish Biol. 80, 1019–1056 (2012).
Cochran, J. E. M. et al. Multi-method assessment of whale shark (Rhincodon typus) residency, distribution, and dispersal behavior at an aggregation site in the Red Sea. PLoS ONE 14, e0222285 (2019).
Copping, J. P., Stewart, B. D., McClean, C. J., Hancock, J. & Rees, R. Does bathymetry drive coastal whale shark (Rhincodon typus) aggregations?. PeerJ 6, e4904 (2018).
Norman, B. M. et al. Undersea constellations: The global biology of an endangered marine megavertebrate further informed through citizen science. Bioscience 67, 1029–1043 (2017).
Donati, G. et al. New insights into the South Ari atoll whale shark, Rhincodon typus, aggregation. In (Hamad bin Khalifa University Press, HBKU Press, 2016). https://doi.org/10.5339/qproc.2016.iwsc4.16.
Riley, M. J., Hale, M. S., Harman, A. & Rees, R. G. Analysis of whale shark Rhincodon typus aggregations near South Ari Atoll, Maldives Archipelago. Aquat. Biol. 8, 145–150 (2010).
Rowat, D., Meekan, M. G., Engelhardt, U., Pardigon, B. & Vely, M. Aggregations of juvenile whale sharks (Rhincodon typus) in the Gulf of Tadjoura, Djibouti. Environ. Biol. Fishes 80, 465–472 (2007).
Cagua, E. F. et al. Acoustic telemetry reveals cryptic residency of whale sharks. Biol. Lett. 11, 20150092 (2015).
Thomson, J. A. et al. Feeding the world’s largest fish: Highly variable whale shark residency patterns at a provisioning site in the Philippines. R. Soc. Open Sci. 4, 170394 (2017).
Perry, C. T. et al. Comparing length-measurement methods and estimating growth parameters of free-swimming whale sharks (Rhincodon typus) near the South Ari Atoll, Maldives. Mar. Freshw. Res. 69, 1487 (2018).
Riley, M. J., Harman, A. & Rees, R. G. Evidence of continued hunting of whale sharks Rhincodon typus in the Maldives. Environ. Biol. Fishes 86, 371–374 (2009).
Cagua, E. F., Collins, N., Hancock, J. & Rees, R. Whale shark economics: A valuation of wildlife tourism in South Ari Atoll. Maldives. PeerJ 2, e515 (2014).
Arzoumanian, Z., Holmberg, J. & Norman, B. An astronomical pattern-matching algorithm for computer-aided identification of whale sharks Rhincodon typus. J. Appl. Ecol. 42, 999–1011 (2005).
Bradshaw, C. J. A., Mollett, H. F. & Meekan, M. G. Inferring population trends for the world’s largest fish from mark recapture estimates of survival. J. Anim. Ecol. 76, 480–489 (2007).
Holmberg, J., Norman, B. & Arzoumanian, Z. Estimating population size, structure, and residency time for whale sharks Rhincodon typus through collaborative photo-identification. Endanger. Species Res. 7, 39–53 (2009).
Rowat, D., Gore, M., Meekan, M. G., Lawler, I. R. & Bradshaw, C. J. A. Aerial survey as a tool to estimate whale shark abundance trends. J. Exp. Mar. Biol. Ecol. 368, 1–8 (2009).
Acuña-Marrero, D. et al. Whale shark (Rhincodon typus) seasonal presence, residence time and habitat use at darwin island, galapagos marine reserve. PLoS ONE 9, e115946 (2014).
Schwarz, C. J., Bailey, R. E., Irvine, J. R. & Dalziel, F. C. Estimating salmon spawning escapement using capture-recapture methods. Can. J. Fish. Aquat. Sci. 50, 1181–1197 (1993).
Schwarz, C. J. & Arnason, A. N. A general methodology for the analysis of capture-recapture experiments in open populations. Biometrics 52, 860 (1996).
Whitehead, H. Analysis of animal movement using opportunistic individual identifications: Application to sperm whales. Ecology 82, 1417–1432 (2001).
QGIS.org. QGIS Geographic Information System. Open Source Geospatial Foundation Project. (2020).
Van Tienhoven, A. M., Den Hartog, J. E., Reijns, R. A. & Peddemors, V. M. A computer-aided program for pattern-matching of natural marks on the spotted raggedtooth shark Carcharias taurus. J. Appl. Ecol. 44, 273–280 (2007).
RStudio Team. RStudio: Integrated Development for R. (2015).
Laake, J. L. RMark: An R interface for analysis of capture-recapture data with MARK. AFSC Processed Rep. 2013-01 Alaska Fish. Sci. Cent., NOAA, Natl. Mar. Fish. Serv., (2013). https://doi.org/10.1017/CBO9781107415324.004.
Schwarz, C., Arnason, A., Cooch, E. & White, G. Jolly-Seber models in MARK. Progr. MARK–a gentle Introd. 18th Ed. (2018).
Cooch, E. & White, G. Program MARK: A gentle introduction (13th ed.). available online with MARK Program. (2006).
Whitehead, H. SOCPROG programs: Analysing animal social structures. Behav. Ecol. Sociobiol. 63, 765–778 (2009).
Whitehead, H. Selection of models of lagged identification rates and lagged association rates using AIC and QAIC. Commun. Stat. Simul. Comput. 36, 1233–1246 (2007).
Buckland, S. T. & Garthwaite, P. H. Quantifying precision of mark-recapture estimates using the bootstrap and related methods. Biometrics 47, 255 (1991).
Rohner, C. A. et al. No place like home? High residency and predictable seasonal movement of whale sharks off Tanzania. Front. Mar. Sci. 7, 423 (2020).
Norman, B. M., Whitty, J. M., Beatty, S. J., Reynolds, S. D. & Morgan, D. L. Do they stay or do they go? Acoustic monitoring of whale sharks at Ningaloo Marine Park, Western Australia. J. Fish Biol. 91, 1713–1720 (2017).
Araujo, G. et al. Population structure and residency patterns of whale sharks, Rhincodon typus, at a provisioning site in Cebu, Philippines. PeerJ 2014, e543 (2014).
Prebble, C. et al. Limited latitudinal ranging of juvenile whale sharks in the Western Indian Ocean suggests the existence of regional management units. Mar. Ecol. Prog. Ser. 601, 167–183 (2018).
Araujo, G. et al. Population structure and residency patterns of whale sharks, Rhincodon typus, at a provisioning site in Cebu, Philippines. PeerJ 2, e543 (2014).
Akhilesh, K. V. et al. Landings of whale sharks Rhincodon typus Smith, 1828 in Indian waters since protection in 2001 through the Indian Wildlife (Protection) Act, 1972. Environ. Biol. Fishes 96, 713–722 (2013).
Heyman, W., Graham, R., Kjerfve, B. & Johannes, R. Whale sharks Rhincodon typus aggregate to feed on fish spawn in Belize. Mar. Ecol. Prog. Ser. 215, 275–282 (2001).
Meekan, M. et al. Population size and structure of whale sharks Rhincodon typus at Ningaloo Reef, Western Australia. Mar. Ecol. Prog. Ser. 319, 275–285 (2006).
Cochran, J. E. M. et al. Population structure of a whale shark Rhincodon typus aggregation in the Red Sea. J. Fish Biol. 89, 1570–1582 (2016).
Araujo, G. et al. Population structure, residency patterns and movements of whale sharks in Southern Leyte, Philippines: Results from dedicated photo-ID and citizen science. Aquat. Conserv. Mar. Freshw. Ecosyst. 27, 237–252 (2017).
Robinson, D. P. et al. Population structure, abundance and movement of whale sharks in the Arabian Gulf and the Gulf of Oman. PLoS ONE 11, e0158593 (2016).
McCoy, E. et al. Long-term photo-identification reveals the population dynamics and strong site fidelity of adult whale sharks to the coastal waters of Donsol, Philippines. Front. Mar. Sci. 5, 271 (2018).
Araujo, G. et al. In-water methods reveal population dynamics of a green turtle Chelonia mydas foraging aggregation in the Philippines. Endanger. Species Res. 40, 207–218 (2019).
Sleeman, J. C. et al. To go or not to go with the flow: Environmental influences on whale shark movement patterns. J. Exp. Mar. Biol. Ecol. 390, 84–98 (2010).
Calambokidis, J., Laake, J. L. & Klimek, A. Abundance and population structure of seasonal gray whales in the Pacific Northwest, 1998–2008. Sc/62/Brg32, Vol. 2008 (2010).
Branstetter, S. Early Life-History Implications of Selected Carcharhinoid and Lamnoid Sharks of the Northwest Atlantic. Elasmobranchs as Living Resour. Adv. Biol. Ecol. Syst. Status Fish. (1990).
Parker, J. H. & Gischler, E. Modern foraminiferal distribution and diversity in two atolls from the Maldives, Indian Ocean. Mar. Micropaleontol. 78, 30–49 (2011).
Halvorsen, M. B., Casper, B. M., Woodley, C. M., Carlson, T. J. & Popper, A. N. Threshold for onset of injury in Chinook salmon from exposure to impulsive pile driving sounds. PLoS ONE 7, e38968 (2012).
Haskell, P. J. et al. Monitoring the effects of tourism on whale shark Rhincodon typus behaviour in Mozambique. ORYX 49, 492–499 (2015).
Quiros, A. L. Tourist compliance to a Code of Conduct and the resulting effects on whale shark (Rhincodon typus) behavior in Donsol, Philippines. Fish. Res. 84, 102–108 (2007).
Araujo, G., Vivier, F., Labaja, J. J., Hartley, D. & Ponzo, A. Assessing the impacts of tourism on the world’s largest fish Rhincodon typus at Panaon Island, Southern Leyte, Philippines. Aquat. Conserv. Mar. Freshw. Ecosyst. 27, 986–994 (2017).
Finger, J. S. et al. Rate of movement of juvenile lemon sharks in a novel open field, are we measuring activity or reaction to novelty?. Anim. Behav. 116, 75–82 (2016).
Cade, D. E. et al. Whale sharks increase swimming effort while filter feeding, but appear to maintain high foraging efficiencies. J. Exp. Biol. 223, jeb.224402 (2020).
Archie, E. A. Wound healing in the wild: stress, sociality, and energetic costs affect wound healing in natural populations. Parasite Immunol. 35, n/a-n/a (2013).
Baker, M. R., Swanson, P. & Young, G. Injuries from non-retention in gillnet fisheries suppress reproductive maturation in escaped fish. PLoS ONE 8, e69615 (2013).
Neat, F. C., Taylor, A. C. & Huntingford, F. A. Proximate costs of fighting in male cichlid fish: The role of injuries and energy metabolism. Anim. Behav. 55, 875–882 (1998).
Meekan, M. G., Fuiman, L. A., Davis, R., Berger, Y. & Thums, M. Swimming strategy and body plan of the world’s largest fish: Implications for foraging efficiency and thermoregulation. Front. Mar. Sci. 2, 64 (2015).
Chin, A., Mourier, J. & Rummer, J. L. Blacktip reef sharks (Carcharhinus melanopterus) show high capacity for wound healing and recovery following injury. Conserv. Physiol. 3(1) (2015).
Tierney, K. B. & Farrell, A. P. The relationships between fish health, metabolic rate, swimming performance and recovery in return-run sockeye salmon, Oncorhynchus nerka (Walbaum). J. Fish Dis. 27, 663–671 (2004).
McGregor, F., Richardson, A. J., Armstrong, A. J., Armstrong, A. O. & Dudgeon, C. L. Rapid wound healing in a reef manta ray masks the extent of vessel strike. PLoS ONE 14, e0225681 (2019).
Tort, L. Stress and immune modulation in fish. Dev. Comp. Immunol. 35, 1366–1375 (2011).
Mateus, A. P., Anjos, L., Cardoso, J. R. & Power, D. M. Chronic stress impairs the local immune response during cutaneous repair in gilthead sea bream (Sparus aurata L.). Mol. Immunol. 87, 267–283 (2017).
Environmental Protection Agency. Maldivian Whale Shark Tourist Encounter Guidelines. (2009).
Leston, F. A. L. Monitoring Tourist Pressure on Whale Shark (Rhincodon typus) Behaviour in South Ari MPA, Maldive) Behaviour in South Ari MPA, Maldive (The University of Edinburgh, Edinburgh, 2016).
Kallsen, H. Regulation of Whale Shark Tourism: A Data Driven Approach for the South Ari Marine Protected Area (Syddansk Universitet, Odense, 2018).
Montero-Quintana, A. N., Vázquez-Haikin, J. A., Merkling, T., Blanchard, P. & Osorio-Beristain, M. Ecotourism impacts on the behaviour of whale sharks: An experimental approach. ORYX 54, 270–275 (2020).
Bouyoucos, I. A., Simpfendorfer, C. A. & Rummer, J. L. Estimating oxygen uptake rates to understand stress in sharks and rays. Rev. Fish Biol. Fish. 29, 297–311 (2019).
Semeniuk, C. A. D., Bourgeon, S., Smith, S. L. & Rothley, K. D. Hematological differences between stingrays at tourist and non-visited sites suggest physiological costs of wildlife tourism. Biol. Conserv. 142, 1818–1829 (2009).
Van Rijn, J. A. & Reina, R. D. Distribution of leukocytes as indicators of stress in the Australian swellshark, Cephaloscyllium laticeps. Fish Shellfish Immunol. 29, 534–538 (2010).
Barnett, A., Payne, N. L., Semmens, J. M. & Fitzpatrick, R. Ecotourism increases the field metabolic rate of whitetip reef sharks. Biol. Conserv. 199, 132–136 (2016).
Mau, R. Managing for conservation and recreation: The Ningaloo whale shark experience. J. Ecotourism 7, 213–225 (2008).
Martin, R. A. A review of behavioural ecology of whale sharks (Rhincodon typus). Fish. Res. 84, 10–16 (2007).
Skomal, G. B. & Mandelman, J. W. The physiological response to anthropogenic stressors in marine elasmobranch fishes: A review with a focus on the secondary response. Comp. Biochem. Physiol. Part A Mol. Integr. Physiol. 126, 146–155 (2012).
Pankhurst, N. W. The endocrinology of stress in fish: An environmental perspective. Gen. Comp. Endocrinol. 170, 265–275 (2011).
Renshaw, G. M. C., Kutek, A. K., Grant, G. D. & Anoopkumar-Dukie, S. Forecasting elasmobranch survival following exposure to severe stressors. Comp. Biochem. Physiol. Part A Mol. Integr. Physiol. 126, 101–112 (2012).
Lester, E. et al. Using an electronic monitoring system and photo identification to understand effects of tourism encounters on whale sharks in Ningaloo Marine Park. Tour. Mar. Environ. 14, 121–131 (2019).
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