Zaneveld, J. R., McMinds, R. & Thurber, R. V. Stress and stability: Applying the Anna Karenina principle to animal microbiomes. Nat. Microbiol. 2, 1–8 (2017).
Google Scholar
Trevelline, B. K., Fontaine, S. S., Hartup, B. K. & Kohl, K. D. Conservation biology needs a microbial renaissance: A call for the consideration of host-associated microbiota in wildlife management practices. Proc. R. Soc. B 286, 2018–2448 (2019).
Google Scholar
Bennett, A. G. On the occurrence of diatoms on the skin of whales. Proc. R. Soc. Lond. B 91, 352–357 (1920).
Google Scholar
Denys, L. Morphology and taxonomy of epizoic diatoms (Epiphalaina and Tursiocola) on a sperm whale (Physeter macrocephalus) stranded on the coast of Belgium. Diatom. Res. 12, 1–18 (1997).
Google Scholar
Majewska, R. Tursiocola neliana sp. nov (Bacillariophyceae) epizoic on South African leatherback sea turtles (Dermochelys coriacea) and new observations on the genus Tursiocola. Phytotaxa 453, 1–15 (2020).
Google Scholar
Majewska, R. et al. Chelonicola and Poulinea, two new gomphonemoid genera living on marine turtles from Costa Rica. Phytotaxa 233, 236–250 (2015).
Google Scholar
Majewska, R. et al. Shared epizoic taxa and differences in diatom community structure between green turtles (Chelonia mydas) from distant habitats. Microb Ecol. 74, 969–978 (2017).
Google Scholar
Majewska, R. et al. Two new epizoic Achnanthes species (Bacillariophyta) living on marine turtles from Costa Rica. Bot. Mar. 60, 303–318 (2017).
Google Scholar
Majewska, R., De Stefano, M. & Van de Vijver, B. Labellicula lecohuiana, a new epizoic diatom species living on green turtles in Costa Rica. Nova Hedwig Beih. 146, 23–31 (2018).
Google Scholar
Majewska, R. et al. Craspedostauros alatus sp. nov., a new diatom (Bacillariophyta) species found on museum sea turtle specimens. Diatom Res. 33, 229–240 (2018).
Google Scholar
Majewska, R. et al. Six new epibiotic Proschkinia (Bacillariophyta) species and new insights into the genus phylogeny. Eur. J. Phycol. 54, 609–631 (2019).
Google Scholar
Majewska, R., Robert, K., Van de Vijver, B. & Nel, R. A new species of Lucanicum (Cyclophorales, Bacillariophyta) associated with loggerhead sea turtles from South Africa. Bot. Lett. 167, 7–14 (2020).
Google Scholar
Frankovich, T. A., Sullivan, M. J. & Stacy, N. I. Tursiocola denysii sp. Nov. (Bacillariophyta) from the neck skin of Loggerhead sea turtles (Caretta caretta). Phytotaxa 234, 227–236 (2015).
Google Scholar
Frankovich, T. A., Ashworth, M. P., Sullivan, M. J., Vesela, J. & Stacy, N. I. Medlinella amphoroidea gen. et sp. Nov. (Bacillariophyta) from the neck skin of Loggerhead sea turtles (Caretta caretta). Phytotaxa 272, 101–114 (2016).
Google Scholar
Riaux-Gobin, C. et al. New epizoic diatom (Bacillariophyta) species from sea turtles in the Eastern Caribbean and South Pacific. Diatom Res. 32, 109–125 (2017).
Google Scholar
Riaux-Gobin, C., Witkowski, A., Chevallier, D. & Daniszewska-Kowalczyk, G. Two new Tursiocola species (Bacillariophyta) epizoic on green turtles (Chelonia mydas) in French Guiana and Eastern Caribbean. Fottea Olomouc 17, 150–163 (2017).
Google Scholar
Riaux-Gobin, C., Witkowski, A., Kociolek, J. P. & Chevallier, D. Navicula dermochelycola sp. Nov., presumably an exclusively epizoic diatom on sea turtles Dermochelys coriacea and Lepidochelys olivacea from French Guiana. Oceanol. Hydrobiol. Stud. 49, 132–139 (2020).
Google Scholar
Robert, K., Bosak, S. & Van de Vijver, B. Catenula exigua sp. nov., a new marine diatom (Bacillariophyta) species from the Adriatic Sea. Phytotaxa 414, 113–118 (2019).
Google Scholar
Van de Vijver, B. & Bosak, S. Planothidium kaetherobertianum, a new marine diatom (Bacillariophyta) species from the Adriatic Sea. Phytotaxa 425, 105–112 (2019).
Google Scholar
Robinson, N. J. et al. Epibiotic diatoms are universally present on all sea turtle species. PLoS ONE 11, e0157011 (2016).
Google Scholar
Van de Vijver, B. et al. Diversity of diatom communities (Bacillariophyta) associated with loggerhead sea turtles. PLoS ONE 15, e0236513 (2020).
Google Scholar
Van de Vijver, B., Robert, K., Witkowski, A. & Bosak, S. Majewskaea gen. nov. (Bacillariophyta), a new marine benthic diatom genus from the Adriatic Sea. Fottea 20, 112–120 (2020).
Google Scholar
Majewska, R. Nagumoea hydrophicola sp. Nov. (Bacillariophyta), the first diatom species described from sea snakes. Diatom Res. 36, 49–59 (2021).
Google Scholar
Frankovich, T. A., Sullivan, M. J. & Stacey, N. I. Three new species of Tursiocola (Bacillariophyta) from the skin of the West Indian manatee (Trichechus manatus). Phytotaxa 204, 33–48 (2015).
Google Scholar
Frankovich, T. A., Ashworth, M. P., Sullivan, M. J., Theriot, E. C. & Stacy, N. I. Epizoic and apochlorotic Tursiocola species (Bacillariophyta) from the skin of Florida manatees (Trichechus manatus latirostris). Protist 169, 539–568 (2018).
Google Scholar
Azari, M. et al. Diatoms on sea turtles and floating debris in the Persian Gulf (Western Asia). Phycologia 59, 292–304 (2020).
Google Scholar
Majewska, R. & Goosen, W. E. For better, for worse: Manatee-associated Tursiocola (Bacillariophyta) remain faithful to their host. J. Phycol. 56, 1019–1027 (2020).
Google Scholar
Smol, J. P. & Stoermer, E. F. The Diatoms: Applications for the Environmental and Earth Sciences (Cambridge University Press, 2010).
Google Scholar
Rivera, S. F. et al. DNA metabarcoding and microscopic analyses of sea turtles biofilms: Complementary to understand turtle behavior. PLoS ONE 13, e0195770 (2018).
Google Scholar
Majewska, R. et al. On sea turtle-associated Craspedostauros with description of three novel species. J Phycol. 57, 199–208 (2021).
Google Scholar
Holmes, R. W. The morphology of diatoms epizoic on cetaceans and their transfer from Cocconeis to two new genera, Bennettella and Epipellis. Br. Phycol. J. 20, 43–57 (1985).
Google Scholar
Woodworth, K. A., Frankovich, T. A. & Freshwater, D. W. Melanothamnus maniticola (Ceramiales, Rhodophyta): An epizoic species evolved for life on the West Indian Manatee. J. Phycol. 55, 1239–1245 (2019).
Google Scholar
Vitt, L. J. & Caldwell, J. P. Herpetology: An Introductory Biology of Amphibians and Reptiles (Academic Press, 2013).
Pitman, L. R. et al. Skin in the game: Epidermal molt as a driver of long-distance migration in whales. Mar. Mamm. Sci. 36, 565–594 (2020).
Google Scholar
Pope, D. H. & Berger, L. R. Algal photosynthesis at increased hydrostatic pressure and constant pO2. Arch. Microbiol. 89, 321–325 (1973).
Google Scholar
Calcagno, V., Jarne, P., Loreau, M., Mouquet, N. & David, P. Diversity spurs diversification in ecological communities. Nat. Commun. 8, 15810 (2017).
Google Scholar
Robinson, N. J. & Pfaller, J. B. Sea turtle epibiosis: Global patterns and knowledge gaps. Trends Evol. Ecol. 10, 844021 (2021).
Conant, T. A., Dutton, P. H., Eguchi, T., Epperly, S. P., Fahy, C. C., Godfrey, M. H., MacPherson, S. L., Possardt, E. E., Schroeder, B. A., Seminoff, J. A., Snover, M. L. Loggerhead sea turtle (Caretta caretta) 2009 status review under the US Endangered Species Act. In Report of the loggerhead biological review Team to the National Marine Fisheries Service. 222, 1–230 (2009).
Evans, K. M., Wortley, A. H. & Mann, D. G. An assessment of potential diatom ‘“barcode”’ genes (cox1, rbcL, 18S and ITS rDNA) and their effectiveness in determining relationships in Sellaphora (Bacillariophyta). Protist 158, 349–364 (2007).
Google Scholar
Hamsher, S. E., Evans, K. M., Mann, D. G., Poulíčková, A. & Saunders, G. W. Barcoding diatoms: Exploring alternatives to COI-5P. Protist 162, 405–422 (2011).
Google Scholar
Bowen, B. W. & Karl, S. A. Population genetics and phylogeography of sea turtles. Mol Ecol. 16, 4886–4907 (2007).
Google Scholar
Shanker, K., Ramadevi, J., Choudhury, B. C., Singh, L. & Aggarwal, R. K. Phylogeography of olive ridley turtles (Lepidochelys olivacea) on the east coast of India: implications for conservation theory. Mol. Ecol. 13, 1899–1909 (2004).
Google Scholar
Pinou, T. et al. Standardizing sea turtle epibiont sampling: Outcomes of the epibiont workshop at the 37th International Sea Turtle Symposium. Mar. Turt. Newsl. 157, 22–32 (2019).
Ehrhert L., Ogren L. H. Studies in foraging habitats: capturing and handling turtles. In Research and management techniques for the conservation of sea turtles (eds. Eckert, K. L., Bjorndal, K. A., Abreu-Grobois, F. A., Donnelly, M.). IUCN/SSC Marine Turtle Specialist Group. Publication No. 4. (1999).
Guillard, R. R. Culture of phytoplankton for feeding marine invertebrates. In Culture of Marine Invertebrate Animals 29–60 (Springer, 1975).
Theriot, E. C., Ashworth, M. P., Nakov, T., Ruck, E. & Jansen, R. K. Dissecting signal and noise in diatom chloroplast protein encoding genes with phylogenetic information profiling. Mol. Phylogenet. Evol. 89, 28–36 (2015).
Google Scholar
Lobban, C. S., Ashworth, M. P., Calaor, J. J. & Theriot, E. C. Extreme diversity in fine-grained morphology reveals fourteen new species of conopeate Nitzschia (Bacillariophyta: Bacillariales). Phytotaxa. 401, 199–238 (2019).
Google Scholar
Lanfear, R., Frandsen, P. B., Wright, A. M., Senfeld, T. & Calcott, B. PartitionFinder 2: New methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol. Biol. Evol. 34, 772–773 (2017).
Google Scholar
Lanfear, R., Calcott, B., Kainer, D., Mayer, C. & Stamatakis, A. Selecting optimal partitioning schemes for phylogenomic datasets. BMC Evol. Biol. 14, 1–14 (2014).
Google Scholar
Stamatakis, A. RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30, 1312–1313 (2014).
Google Scholar
Nguyen, L.-T., Schmidt, H. A., von Haeseler, A. & Minh, B. Q. IQ-TREE: A fast and effective stochastic algorithm for estimating maximum likelihood phylogenies. Mol. Biol. Evol. 32, 268–274 (2015).
Google Scholar
Chernomor, O., Von Haeseler, A. & Minh, B. Q. Terrace aware data structure for phylogenomic inference from supermatrices. Syst. Biol. 65, 997–1008 (2016).
Google Scholar
Aberer, A. J., Kobert, K. & Stamatakis, A. ExaBayes: Massively parallel bayesian tree inference for the whole-genome Era. Mol. Biol. Evol. 31, 2553–2556 (2014).
Google Scholar
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