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Voyage The cold-core cyclonic eddy was studied between 28 March and 3 April 2016 and was part of a GEOTRACES process study (Fig. 1). The eddy was about 190 km in diameter and was a stable feature that had formed approximately 1 month prior to sampling (Fig. 1, Supplementary Movie 1). It was formed by detaching from waters 2 degrees […] More
Ahmed MZ, Breinholt JW, Kawahara AY (2016) Evidence for common horizontal transmission of Wolbachia among butterflies and moths. BMC Evol Biol 16:118 Anbutsu H, Goto S, Fukatsu T (2008) High and low temperatures differently affect infection density and vertical transmission of male-killing Spiroplasma symbionts in Drosophila hosts. Appl Environ Microbiol 74(19):6053–6059 Atyame CM, Delsuc F, […] More
Microbial interactions are dependent on diversity and time since inoculation The link between increasing biodiversity and primary productivity is well-established in environmental bacteria, and our results confirmed this relationship in clinical isolates (Fig. 1a) was significant (β48 = 1.49 ± 0.46 log10(colony forming units (cfu) ml−1) species−1, R2 = 0.29, p = 0.003) over time scales encompassing initial growth, but became non-significant (β168 = 0.79 ± 0.39 log10(cfu […] More
Delineation of pangenomes and habitats descriptors The basis of this study is a large collection of pangenomes from a diverse set of prokaryotic species. To establish this collection, we filtered the proGenomes database of annotated prokaryotic genomes [32] to select consistently defined species (see “Methods”, also [31]) for which at least ten high-quality genomes (conspecific […] More
1. Mcmahon S, Parnell J. Weighing the deep continental biosphere. FEMS Microbiol Ecol. 2014;87:113–20. 2. Magnabosco C, Lin L-H, Dong H, Bomberg M, Ghiorse W, Stan-Lotter H, et al. The biomass and biodiversity of the continental subsurface. Nat Geosci. 2018;11:707–17. 3. Pedersen K. Microbial life in deep granitic rock. FEMS Microbiol Rev. 1997;20:399–414. 4. Bagnoud […] More
1. Breitburg, D. L. et al. Understanding Effects of Multiple Stressors: Ideas and Challenges. in Successes, Limitations, and Frontiers in Ecosystem Science (eds. Pace, M. L. & Groffman, P. M.) 416–431, https://doi.org/10.1007/978-1-4612-1724-4_17, (Springer New York, 1998) Google Scholar 2. Frost, T. M. et al. Multiple stresses from a single agent: Diverse responses to the experimental […] More
1. Faust, K. & Raes, J. Microbial interactions: from networks to models. Nat. Rev. Microbiol. 10, 538–550 (2012). 2. Fuhrman, J. A. Microbial community structure and its functional implications. Nature 459, 193–199 (2009). 3. Ley, R. E., Peterson, D. A. & Gordon, J. I. Ecological and evolutionary forces shaping microbial diversity in the human intestine. […] More
Fe-speciation data show pronounced water column redox stratification during deposition of the Kuibis Subgroup5. Marine transgression during deposition of the Mara, Kliphoek and lower Omkyk members resulted in basin-wide shoaling of the redoxcline, represented by dominantly anoxic ferruginous deeper and shallower (above fair weather wave base) waters (Fig. 2b,c)5,6. The data then show more frequent development […] More
